RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 TDRD12Q587J7 1177 aaKnown RBP16.3■□□□□ 0.2
MACF1-223ENST00000496360 DPY19L2Q6NUT2 758 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 PIK3AP1Q6ZUJ8 805 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 ANKS1AQ92625 1134 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 RAB3IPQ96QF0 476 aaPredicted RBP16.3■□□□□ 0.2
MACF1-223ENST00000496360 TMEM109Q9BVC6 243 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 TXLNGYQ9BZA5 131 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 INCENPQ9NQS7 918 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 UTP11Q9Y3A2 253 aaKnown RBP16.3■□□□□ 0.2
MACF1-223ENST00000496360 ATP6V0A2Q9Y487 856 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 LRRD1A4D1F6 860 aa16.29■□□□□ 0.2
MACF1-223ENST00000496360 ENO4A6NNW6 628 aa16.29■□□□□ 0.2
MACF1-223ENST00000496360 FTCDO95954 541 aa16.29■□□□□ 0.2
MACF1-223ENST00000496360 RARAP10276 462 aa16.29■□□□□ 0.2
MACF1-223ENST00000496360 ATP4AP20648 1035 aa16.29■□□□□ 0.2
MACF1-223ENST00000496360 ANXA13P27216 316 aa16.29■□□□□ 0.2
MACF1-223ENST00000496360 GBP1P32455 592 aa16.29■□□□□ 0.2
MACF1-223ENST00000496360 ALDH5A1P51649 535 aaPredicted RBP16.29■□□□□ 0.2
MACF1-223ENST00000496360 COPS2P61201 443 aa16.29■□□□□ 0.2
MACF1-223ENST00000496360 GRAPQ13588 217 aa16.29■□□□□ 0.2
MACF1-223ENST00000496360 CLUL1Q15846 466 aa16.29■□□□□ 0.2
MACF1-223ENST00000496360 BTNL9Q6UXG8 535 aa16.29■□□□□ 0.2
MACF1-223ENST00000496360 APBB1IPQ7Z5R6 666 aaPredicted RBP16.29■□□□□ 0.2
MACF1-223ENST00000496360 SLC51AQ86UW1 340 aa16.29■□□□□ 0.2
MACF1-223ENST00000496360 RASGEF1CQ8N431 466 aa16.29■□□□□ 0.2
MACF1-223ENST00000496360 ANKRD13CQ8N6S4 541 aa16.29■□□□□ 0.2
MACF1-223ENST00000496360 GRAPLQ8TC17 118 aaPredicted RBP16.29■□□□□ 0.2
MACF1-223ENST00000496360 NAF1Q96HR8 494 aaKnown RBP16.29■□□□□ 0.2
MACF1-223ENST00000496360 ZKSCAN3Q9BRR0 538 aa16.29■□□□□ 0.2
MACF1-223ENST00000496360 PAPOLBQ9NRJ5 636 aaKnown RBP16.29■□□□□ 0.2
MACF1-223ENST00000496360 LRRC42Q9Y546 428 aa16.29■□□□□ 0.2
MACF1-223ENST00000496360 DOCK2Q92608 1830 aa16.29■□□□□ 0.2
MACF1-223ENST00000496360 TOMM70O94826 608 aa16.28■□□□□ 0.2
MACF1-223ENST00000496360 OAS1P00973 400 aaKnown RBP16.28■□□□□ 0.2
MACF1-223ENST00000496360 SCG2P13521 617 aa16.28■□□□□ 0.2
MACF1-223ENST00000496360 DHX9Q08211 1270 aaKnown RBP16.28■□□□□ 0.2
MACF1-223ENST00000496360 BNIP1Q12981 228 aa16.28■□□□□ 0.2
MACF1-223ENST00000496360 TRADDQ15628 312 aa16.28■□□□□ 0.2
MACF1-223ENST00000496360 C6orf118Q5T5N4 469 aa16.28■□□□□ 0.2
MACF1-223ENST00000496360 GALNT15Q8N3T1 639 aa16.28■□□□□ 0.2
MACF1-223ENST00000496360 OSBPL1AQ9BXW6 950 aa16.28■□□□□ 0.2
MACF1-223ENST00000496360 TRIM9Q9C026 710 aa16.28■□□□□ 0.2
MACF1-223ENST00000496360 ECT2Q9H8V3 914 aa16.28■□□□□ 0.2
MACF1-223ENST00000496360 INTS9Q9NV88 658 aaKnown RBP16.28■□□□□ 0.2
MACF1-223ENST00000496360 CNOT7Q9UIV1 285 aaKnown RBP16.28■□□□□ 0.2
MACF1-223ENST00000496360 CNTNAP5Q8WYK1 1306 aa16.28■□□□□ 0.2
MACF1-223ENST00000496360 SNX3O60493 162 aa16.28■□□□□ 0.2
MACF1-223ENST00000496360 AP1G2O75843 785 aa16.28■□□□□ 0.2
MACF1-223ENST00000496360 SUN1O94901 812 aa16.28■□□□□ 0.2
MACF1-223ENST00000496360 TAF11Q15544 211 aa16.28■□□□□ 0.2
MACF1-223ENST00000496360 MTHFD1LQ6UB35 978 aa16.28■□□□□ 0.2
MACF1-223ENST00000496360 LRRC34Q8IZ02 419 aa16.28■□□□□ 0.2
MACF1-223ENST00000496360 KLHL29Q96CT2 875 aa16.28■□□□□ 0.2
MACF1-223ENST00000496360 DTNBP1Q96EV8 351 aa16.28■□□□□ 0.2
MACF1-223ENST00000496360 ZSCAN10Q96SZ4 725 aaPredicted RBP16.28■□□□□ 0.2
MACF1-223ENST00000496360 TRIM7Q9C029 511 aa16.28■□□□□ 0.2
MACF1-223ENST00000496360 YIPF3Q9GZM5 350 aa16.28■□□□□ 0.2
MACF1-223ENST00000496360 TTC7AQ9ULT0 858 aaPredicted RBP16.28■□□□□ 0.2
MACF1-223ENST00000496360 DIS3Q9Y2L1 958 aaKnown RBP16.28■□□□□ 0.2
MACF1-223ENST00000496360 USP15Q9Y4E8 981 aaPredicted RBP16.28■□□□□ 0.2
MACF1-223ENST00000496360 KCNK3O14649 394 aa16.27■□□□□ 0.2
MACF1-223ENST00000496360 EPHB6O15197 1021 aa16.27■□□□□ 0.2
MACF1-223ENST00000496360 PRDM1O75626 825 aa16.27■□□□□ 0.2
MACF1-223ENST00000496360 KLRC1P26715 233 aa16.27■□□□□ 0.2
MACF1-223ENST00000496360 MSH2P43246 934 aa16.27■□□□□ 0.2
MACF1-223ENST00000496360 CCDC178Q5BJE1 867 aa16.27■□□□□ 0.2
MACF1-223ENST00000496360 SDCCAG8Q86SQ7 713 aaPredicted RBP16.27■□□□□ 0.2
MACF1-223ENST00000496360 SP8Q8IXZ3 490 aa16.27■□□□□ 0.2
MACF1-223ENST00000496360 PVALEFA0A1B0GWK0 134 aa16.26■□□□□ 0.19
MACF1-223ENST00000496360 HIP1RO75146 1068 aa16.26■□□□□ 0.19
MACF1-223ENST00000496360 CTCFP49711 727 aaPredicted RBP16.26■□□□□ 0.19
MACF1-223ENST00000496360 PFKFB3Q16875 520 aaPredicted RBP16.26■□□□□ 0.19
MACF1-223ENST00000496360 CCDC152Q4G0S7 254 aa16.26■□□□□ 0.19
MACF1-223ENST00000496360 IFIT1BQ5T764 474 aaKnown RBP16.26■□□□□ 0.19
MACF1-223ENST00000496360 GALNT17Q6IS24 598 aa16.26■□□□□ 0.19
MACF1-223ENST00000496360 TAOK1Q7L7X3 1001 aa16.26■□□□□ 0.19
MACF1-223ENST00000496360 GUF1Q8N442 669 aaKnown RBP16.26■□□□□ 0.19
MACF1-223ENST00000496360 SH3TC2Q8TF17 1288 aa16.26■□□□□ 0.19
MACF1-223ENST00000496360 FMO2Q99518 471 aa16.26■□□□□ 0.19
MACF1-223ENST00000496360 NEUROG2Q9H2A3 272 aa16.26■□□□□ 0.19
MACF1-223ENST00000496360 SLC4A4Q9Y6R1 1079 aa16.26■□□□□ 0.19
MACF1-223ENST00000496360 MYH7BA7E2Y1 1941 aa16.26■□□□□ 0.19
MACF1-223ENST00000496360 IGF2BP3O00425 579 aaKnown RBP eCLIP16.26■□□□□ 0.19
MACF1-223ENST00000496360 ASIC1P78348 528 aa16.26■□□□□ 0.19
MACF1-223ENST00000496360 FAM133BQ5BKY9 247 aaKnown RBP16.26■□□□□ 0.19
MACF1-223ENST00000496360 ASRGL1Q7L266 308 aa16.26■□□□□ 0.19
MACF1-223ENST00000496360 TMC4Q7Z404 712 aa16.26■□□□□ 0.19
MACF1-223ENST00000496360 VGLL2Q8N8G2 317 aa16.26■□□□□ 0.19
MACF1-223ENST00000496360 TTLL11Q8NHH1 800 aa16.26■□□□□ 0.19
MACF1-223ENST00000496360 NEK9Q8TD19 979 aa16.26■□□□□ 0.19
MACF1-223ENST00000496360 BICD1Q96G01 975 aa16.26■□□□□ 0.19
MACF1-223ENST00000496360 ELAC2Q9BQ52 826 aaKnown RBP16.26■□□□□ 0.19
MACF1-223ENST00000496360 ARMT1Q9H993 441 aa16.26■□□□□ 0.19
MACF1-223ENST00000496360 RIC8AQ9NPQ8 531 aa16.26■□□□□ 0.19
MACF1-223ENST00000496360 AIPL1Q9NZN9 384 aa16.26■□□□□ 0.19
MACF1-223ENST00000496360 PNMA2Q9UL42 364 aa16.26■□□□□ 0.19
MACF1-223ENST00000496360 AGAP1Q9UPQ3 857 aa16.26■□□□□ 0.19
MACF1-223ENST00000496360 ARAP2Q8WZ64 1704 aa16.25■□□□□ 0.19
MACF1-223ENST00000496360 KRIT1O00522 736 aa16.25■□□□□ 0.19
MACF1-223ENST00000496360 CEP104O60308 925 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms