RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 GCFC2P16383 781 aaKnown RBP16.32■□□□□ 0.2
PDAP1-204ENST00000496335 CD52P31358 61 aa16.32■□□□□ 0.2
PDAP1-204ENST00000496335 PRKCEQ02156 737 aa16.32■□□□□ 0.2
PDAP1-204ENST00000496335 ADGRE1Q14246 886 aa16.32■□□□□ 0.2
PDAP1-204ENST00000496335 RABEP1Q15276 862 aa16.32■□□□□ 0.2
PDAP1-204ENST00000496335 POTEDQ86YR6 584 aa16.32■□□□□ 0.2
PDAP1-204ENST00000496335 HAS1Q92839 578 aa16.32■□□□□ 0.2
PDAP1-204ENST00000496335 APBB2Q92870 758 aa16.32■□□□□ 0.2
PDAP1-204ENST00000496335 LLPHQ9BRT6 129 aaKnown RBP16.32■□□□□ 0.2
PDAP1-204ENST00000496335 CELF4Q9BZC1 486 aaKnown RBP16.32■□□□□ 0.2
PDAP1-204ENST00000496335 SH2B1Q9NRF2 756 aaPredicted RBP16.32■□□□□ 0.2
PDAP1-204ENST00000496335 TRPV2Q9Y5S1 764 aa16.32■□□□□ 0.2
PDAP1-204ENST00000496335 M0QZ92 97 aa16.31■□□□□ 0.2
PDAP1-204ENST00000496335 RFXAPO00287 272 aa16.31■□□□□ 0.2
PDAP1-204ENST00000496335 EML1O00423 815 aa16.31■□□□□ 0.2
PDAP1-204ENST00000496335 WNT7AO00755 349 aa16.31■□□□□ 0.2
PDAP1-204ENST00000496335 UPP2O95045 317 aa16.31■□□□□ 0.2
PDAP1-204ENST00000496335 OATP04181 439 aa16.31■□□□□ 0.2
PDAP1-204ENST00000496335 RPLP2P05387 115 aaKnown RBP16.31■□□□□ 0.2
PDAP1-204ENST00000496335 TSHZ1Q6ZSZ6 1077 aa16.31■□□□□ 0.2
PDAP1-204ENST00000496335 NME8Q8N427 588 aa16.31■□□□□ 0.2
PDAP1-204ENST00000496335 METTL13Q8N6R0 699 aa16.31■□□□□ 0.2
PDAP1-204ENST00000496335 SLC17A8Q8NDX2 589 aa16.31■□□□□ 0.2
PDAP1-204ENST00000496335 RDM1Q8NG50 284 aa16.31■□□□□ 0.2
PDAP1-204ENST00000496335 FAM167AQ96KS9 214 aa16.31■□□□□ 0.2
PDAP1-204ENST00000496335 FAM20AQ96MK3 541 aa16.31■□□□□ 0.2
PDAP1-204ENST00000496335 PPP1R16BQ96T49 567 aa16.31■□□□□ 0.2
PDAP1-204ENST00000496335 GAS2L1Q99501 681 aaPredicted RBP16.31■□□□□ 0.2
PDAP1-204ENST00000496335 RAD9AQ99638 391 aa16.31■□□□□ 0.2
PDAP1-204ENST00000496335 CDHR5Q9HBB8 845 aa16.31■□□□□ 0.2
PDAP1-204ENST00000496335 NRBP2Q9NSY0 501 aa16.31■□□□□ 0.2
PDAP1-204ENST00000496335 VAV3Q9UKW4 847 aa16.31■□□□□ 0.2
PDAP1-204ENST00000496335 GINS2Q9Y248 185 aa16.31■□□□□ 0.2
PDAP1-204ENST00000496335 TRANK1O15050 2925 aa16.31■□□□□ 0.2
PDAP1-204ENST00000496335 PRRC2BQ5JSZ5 2229 aaKnown RBP16.3■□□□□ 0.2
PDAP1-204ENST00000496335 TMEM150BA6NC51 233 aa16.3■□□□□ 0.2
PDAP1-204ENST00000496335 EPOPA6NHQ4 379 aa16.3■□□□□ 0.2
PDAP1-204ENST00000496335 MARCH6O60337 910 aa16.3■□□□□ 0.2
PDAP1-204ENST00000496335 IGFBP4P22692 258 aa16.3■□□□□ 0.2
PDAP1-204ENST00000496335 BANK1Q8NDB2 785 aa16.3■□□□□ 0.2
PDAP1-204ENST00000496335 TOP1MTQ969P6 601 aa16.3■□□□□ 0.2
PDAP1-204ENST00000496335 C8orf76Q96K31 380 aa16.3■□□□□ 0.2
PDAP1-204ENST00000496335 NAP1L4Q99733 375 aaKnown RBP16.3■□□□□ 0.2
PDAP1-204ENST00000496335 UPF2Q9HAU5 1272 aaKnown RBP16.3■□□□□ 0.2
PDAP1-204ENST00000496335 CEP131Q9UPN4 1083 aa16.3■□□□□ 0.2
PDAP1-204ENST00000496335 A0A0C4DFX4 3053 aa16.3■□□□□ 0.2
PDAP1-204ENST00000496335 TTC3P53804 2025 aa16.29■□□□□ 0.2
PDAP1-204ENST00000496335 KDM3AQ9Y4C1 1321 aa16.29■□□□□ 0.2
PDAP1-204ENST00000496335 ENPP3O14638 875 aa16.29■□□□□ 0.2
PDAP1-204ENST00000496335 TBX3O15119 743 aa16.29■□□□□ 0.2
PDAP1-204ENST00000496335 STBD1O95210 358 aa16.29■□□□□ 0.2
PDAP1-204ENST00000496335 CD2BP2O95400 341 aaKnown RBP16.29■□□□□ 0.2
PDAP1-204ENST00000496335 VTNP04004 478 aa16.29■□□□□ 0.2
PDAP1-204ENST00000496335 CLCN3P51790 818 aa16.29■□□□□ 0.2
PDAP1-204ENST00000496335 PPP2R5CQ13362 524 aa16.29■□□□□ 0.2
PDAP1-204ENST00000496335 TMEM266Q2M3C6 531 aa16.29■□□□□ 0.2
PDAP1-204ENST00000496335 LRRC71Q8N4P6 559 aa16.29■□□□□ 0.2
PDAP1-204ENST00000496335 PPM1EQ8WY54 764 aa16.29■□□□□ 0.2
PDAP1-204ENST00000496335 ARNTL2Q8WYA1 636 aa16.29■□□□□ 0.2
PDAP1-204ENST00000496335 SH2D3AQ9BRG2 576 aa16.29■□□□□ 0.2
PDAP1-204ENST00000496335 PADI3Q9ULW8 664 aa16.29■□□□□ 0.2
PDAP1-204ENST00000496335 UNC80Q8N2C7 3258 aa16.29■□□□□ 0.2
PDAP1-204ENST00000496335 LINC01553A4QN01 128 aa16.28■□□□□ 0.2
PDAP1-204ENST00000496335 MAGEB2O15479 319 aa16.28■□□□□ 0.2
PDAP1-204ENST00000496335 ATP2B1P20020 1258 aa16.28■□□□□ 0.2
PDAP1-204ENST00000496335 HMGN5P82970 282 aaKnown RBP16.28■□□□□ 0.2
PDAP1-204ENST00000496335 HTRA4P83105 476 aaPredicted RBP16.28■□□□□ 0.2
PDAP1-204ENST00000496335 KIZQ2M2Z5 673 aa16.28■□□□□ 0.2
PDAP1-204ENST00000496335 MTERF2Q49AM1 385 aa16.28■□□□□ 0.2
PDAP1-204ENST00000496335 XKR3Q5GH77 459 aa16.28■□□□□ 0.2
PDAP1-204ENST00000496335 EFCAB12Q6NXP0 572 aa16.28■□□□□ 0.2
PDAP1-204ENST00000496335 RTN4RL1Q86UN2 441 aaPredicted RBP16.28■□□□□ 0.2
PDAP1-204ENST00000496335 USP38Q8NB14 1042 aa16.28■□□□□ 0.2
PDAP1-204ENST00000496335 FAM184AQ8NB25 1140 aa16.28■□□□□ 0.2
PDAP1-204ENST00000496335 TMEM40Q8WWA1 233 aa16.28■□□□□ 0.2
PDAP1-204ENST00000496335 LINC01599Q8WXQ3 324 aa16.28■□□□□ 0.2
PDAP1-204ENST00000496335 TBC1D32Q96NH3 1257 aa16.28■□□□□ 0.2
PDAP1-204ENST00000496335 SUGCTQ9HAC7 445 aa16.28■□□□□ 0.2
PDAP1-204ENST00000496335 SEPT9Q9UHD8 586 aaPredicted RBP16.28■□□□□ 0.2
PDAP1-204ENST00000496335 MTUS1Q9ULD2 1270 aa16.28■□□□□ 0.2
PDAP1-204ENST00000496335 NOC2LQ9Y3T9 749 aaKnown RBP16.28■□□□□ 0.2
PDAP1-204ENST00000496335 INSL6Q9Y581 213 aa16.28■□□□□ 0.2
PDAP1-204ENST00000496335 SQORQ9Y6N5 450 aa16.28■□□□□ 0.2
PDAP1-204ENST00000496335 DDX11L8A8MPP1 907 aa16.27■□□□□ 0.2
PDAP1-204ENST00000496335 ST18O60284 1047 aa16.27■□□□□ 0.2
PDAP1-204ENST00000496335 BAG4O95429 457 aaKnown RBP16.27■□□□□ 0.2
PDAP1-204ENST00000496335 PSMC5P62195 406 aa16.27■□□□□ 0.2
PDAP1-204ENST00000496335 SPIRE1Q08AE8 756 aa16.27■□□□□ 0.2
PDAP1-204ENST00000496335 NFX1Q12986 1120 aaKnown RBP16.27■□□□□ 0.2
PDAP1-204ENST00000496335 PAK2Q13177 524 aa16.27■□□□□ 0.2
PDAP1-204ENST00000496335 SAFBQ15424 915 aaKnown RBP eCLIP16.27■□□□□ 0.2
PDAP1-204ENST00000496335 TARBP2Q15633 366 aaKnown RBP16.27■□□□□ 0.2
PDAP1-204ENST00000496335 CCDC85BQ15834 202 aaPredicted RBP16.27■□□□□ 0.2
PDAP1-204ENST00000496335 NCAPH2Q6IBW4 605 aa16.27■□□□□ 0.2
PDAP1-204ENST00000496335 LINC01465Q8N7H1 131 aa16.27■□□□□ 0.2
PDAP1-204ENST00000496335 FBXO18Q8NFZ0 1043 aa16.27■□□□□ 0.2
PDAP1-204ENST00000496335 ZNF668Q96K58 619 aaPredicted RBP16.27■□□□□ 0.2
PDAP1-204ENST00000496335 OSMRQ99650 979 aa16.27■□□□□ 0.2
PDAP1-204ENST00000496335 NIFKQ9BYG3 293 aaKnown RBP16.27■□□□□ 0.2
PDAP1-204ENST00000496335 WRAP73Q9P2S5 460 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms