RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 PPCSQ9HAB8 311 aa5.29□□□□□ -1.56
CMSS1-207ENST00000494412 PRDM7Q9NQW5 492 aa5.29□□□□□ -1.56
CMSS1-207ENST00000494412 DDX21Q9NR30 783 aaKnown RBP eCLIP5.29□□□□□ -1.56
CMSS1-207ENST00000494412 ZNF277Q9NRM2 450 aaPredicted RBP5.29□□□□□ -1.56
CMSS1-207ENST00000494412 USP36Q9P275 1121 aaKnown RBP5.29□□□□□ -1.56
CMSS1-207ENST00000494412 IMPACTQ9P2X3 320 aa5.29□□□□□ -1.56
CMSS1-207ENST00000494412 PHTF1Q9UMS5 762 aa5.29□□□□□ -1.56
CMSS1-207ENST00000494412 A0A1W2PQ45 241 aaPredicted RBP5.28□□□□□ -1.56
CMSS1-207ENST00000494412 A0A1W2PQY0 241 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 CCDC189A1A4V9 331 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 FAM90A27PA6NNH2 459 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 A6NNZ2 444 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 FOXP2O15409 715 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 NDUFS2O75306 463 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 APOL3O95236 402 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 NTRK1P04629 796 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 PTPN1P18031 435 aaKnown RBP5.28□□□□□ -1.56
CMSS1-207ENST00000494412 RHCEP18577 417 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 SERPINB3P29508 390 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 GJA4P35212 333 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 HTR3AP46098 478 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 USP14P54578 494 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 MANFP55145 182 aaKnown RBP5.28□□□□□ -1.56
CMSS1-207ENST00000494412 CORO7P57737 925 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 RTP1P59025 263 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 RHDQ02161 417 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 TUSC3Q13454 348 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 PLCL1Q15111 1095 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 LLGL1Q15334 1064 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 CHRNA2Q15822 529 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.28□□□□□ -1.56
CMSS1-207ENST00000494412 HSP90AB4PQ58FF6 505 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 CYB5RLQ6IPT4 315 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 CEP128Q6ZU80 1094 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 CHST15Q7LFX5 561 aaPredicted RBP5.28□□□□□ -1.56
CMSS1-207ENST00000494412 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.28□□□□□ -1.56
CMSS1-207ENST00000494412 C11orf96Q7Z7L8 435 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 STK11IPQ8N1F8 1099 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 CAMKK1Q8N5S9 505 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 DIS3LQ8TF46 1054 aaKnown RBP5.28□□□□□ -1.56
CMSS1-207ENST00000494412 FERMT2Q96AC1 680 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 MISP3Q96FF7 219 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 FAM193BQ96PV7 902 aaPredicted RBP5.28□□□□□ -1.56
CMSS1-207ENST00000494412 MAP3K14Q99558 947 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 G6PC3Q9BUM1 346 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 POFUT1Q9H488 388 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 FAM204AQ9H8W3 233 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 PRDM16Q9HAZ2 1276 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 PTPRHQ9HD43 1115 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 FBLN5Q9UBX5 448 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 TUBD1Q9UJT1 453 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 TELO2Q9Y4R8 837 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 PPP2R3BQ9Y5P8 575 aa5.28□□□□□ -1.56
CMSS1-207ENST00000494412 A0A1W2PQJ5 194 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 UBA6A0AVT1 1052 aaPredicted RBP5.27□□□□□ -1.57
CMSS1-207ENST00000494412 TPP1O14773 563 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 HGSO14964 777 aaPredicted RBP5.27□□□□□ -1.57
CMSS1-207ENST00000494412 SH3BP5O60239 455 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 C4BPAP04003 597 aaKnown RBP5.27□□□□□ -1.57
CMSS1-207ENST00000494412 LPLP06858 475 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 MMEP08473 750 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 POU2F2P09086 479 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 SDHAP31040 664 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 DUSP4Q13115 394 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 IKZF1Q13422 519 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 HSF5Q4G112 596 aaPredicted RBP5.27□□□□□ -1.57
CMSS1-207ENST00000494412 EMC4Q5J8M3 183 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 ATAT1Q5SQI0 421 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 CCDC149Q6ZUS6 474 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 NME9Q86XW9 330 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 PHYKPLQ8IUZ5 450 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 NLGN2Q8NFZ4 835 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 PPP1R35Q8TAP8 253 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 ASB11Q8WXH4 323 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 TNIP3Q96KP6 325 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 SMOC1Q9H4F8 434 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 CARS2Q9HA77 564 aaKnown RBP5.27□□□□□ -1.57
CMSS1-207ENST00000494412 MYOTQ9UBF9 498 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 EBF1Q9UH73 591 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 SERPINB13Q9UIV8 391 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 ADAMTS6Q9UKP5 1117 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 PTPN22Q9Y2R2 807 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 TAF6LQ9Y6J9 622 aa5.27□□□□□ -1.57
CMSS1-207ENST00000494412 PRSS38A1L453 326 aa5.26□□□□□ -1.57
CMSS1-207ENST00000494412 MSL3P1P0C860 447 aa5.26□□□□□ -1.57
CMSS1-207ENST00000494412 MTHFD2P13995 350 aa5.26□□□□□ -1.57
CMSS1-207ENST00000494412 PDCP20941 246 aa5.26□□□□□ -1.57
CMSS1-207ENST00000494412 FUT4P22083 530 aa5.26□□□□□ -1.57
CMSS1-207ENST00000494412 KIR2DL1P43626 348 aaPredicted RBP5.26□□□□□ -1.57
CMSS1-207ENST00000494412 KIR2DL2P43627 348 aaPredicted RBP5.26□□□□□ -1.57
CMSS1-207ENST00000494412 FXR1P51114 621 aaKnown RBP eCLIP5.26□□□□□ -1.57
CMSS1-207ENST00000494412 SLC5A3P53794 718 aa5.26□□□□□ -1.57
CMSS1-207ENST00000494412 EPHA5P54756 1037 aa5.26□□□□□ -1.57
CMSS1-207ENST00000494412 ZNF280AP59817 542 aaPredicted RBP5.26□□□□□ -1.57
CMSS1-207ENST00000494412 MRPS9P82933 396 aaKnown RBP5.26□□□□□ -1.57
CMSS1-207ENST00000494412 GRIN1Q05586 938 aa5.26□□□□□ -1.57
CMSS1-207ENST00000494412 MOGSQ13724 837 aa5.26□□□□□ -1.57
CMSS1-207ENST00000494412 SLC14A2Q15849 920 aa5.26□□□□□ -1.57
CMSS1-207ENST00000494412 PITRM1Q5JRX3 1037 aa5.26□□□□□ -1.57
CMSS1-207ENST00000494412 ZBTB41Q5SVQ8 909 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms