RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 A0A0G2JNJ9 132 aa6.66□□□□□ -1.34
SMC4-223ENST00000493695 CCDC66A2RUB6 948 aa6.66□□□□□ -1.34
SMC4-223ENST00000493695 SCDO00767 359 aa6.66□□□□□ -1.34
SMC4-223ENST00000493695 ECE1P42892 770 aa6.66□□□□□ -1.34
SMC4-223ENST00000493695 STAT5BP51692 787 aa6.66□□□□□ -1.34
SMC4-223ENST00000493695 INHBCP55103 352 aa6.66□□□□□ -1.34
SMC4-223ENST00000493695 SUMO1P63165 101 aaKnown RBP6.66□□□□□ -1.34
SMC4-223ENST00000493695 NFYCQ13952 458 aa6.66□□□□□ -1.34
SMC4-223ENST00000493695 RAB33AQ14088 237 aa6.66□□□□□ -1.34
SMC4-223ENST00000493695 MTERF2Q49AM1 385 aa6.66□□□□□ -1.34
SMC4-223ENST00000493695 SPATC1Q76KD6 591 aa6.66□□□□□ -1.34
SMC4-223ENST00000493695 C16orf59Q7L2K0 433 aa6.66□□□□□ -1.34
SMC4-223ENST00000493695 CISD2Q8N5K1 135 aaKnown RBP6.66□□□□□ -1.34
SMC4-223ENST00000493695 PCDH19Q8TAB3 1148 aa6.66□□□□□ -1.34
SMC4-223ENST00000493695 BTBD2Q9BX70 525 aa6.66□□□□□ -1.34
SMC4-223ENST00000493695 Q9UFV3 132 aa6.66□□□□□ -1.34
SMC4-223ENST00000493695 MMEP08473 750 aa6.65□□□□□ -1.34
SMC4-223ENST00000493695 NAT1P18440 290 aa6.65□□□□□ -1.34
SMC4-223ENST00000493695 MAKP20794 623 aa6.65□□□□□ -1.34
SMC4-223ENST00000493695 AOAHP28039 575 aa6.65□□□□□ -1.34
SMC4-223ENST00000493695 SSRP1Q08945 709 aaKnown RBP6.65□□□□□ -1.34
SMC4-223ENST00000493695 MOGSQ13724 837 aa6.65□□□□□ -1.34
SMC4-223ENST00000493695 EIF4HQ15056 248 aaKnown RBP6.65□□□□□ -1.34
SMC4-223ENST00000493695 FAM209AQ5JX71 171 aa6.65□□□□□ -1.34
SMC4-223ENST00000493695 ZNF483Q8TF39 744 aaPredicted RBP6.65□□□□□ -1.34
SMC4-223ENST00000493695 CACTINQ8WUQ7 758 aaKnown RBP6.65□□□□□ -1.34
SMC4-223ENST00000493695 WNK4Q96J92 1243 aa6.65□□□□□ -1.34
SMC4-223ENST00000493695 NELFAQ9H3P2 528 aa6.65□□□□□ -1.34
SMC4-223ENST00000493695 GIT1Q9Y2X7 761 aa6.65□□□□□ -1.34
SMC4-223ENST00000493695 PRAMEF22A3QJZ6 481 aa6.64□□□□□ -1.35
SMC4-223ENST00000493695 PPFIA2O75334 1257 aa6.64□□□□□ -1.35
SMC4-223ENST00000493695 STK10O94804 968 aaKnown RBP6.64□□□□□ -1.35
SMC4-223ENST00000493695 C4BPAP04003 597 aaKnown RBP6.64□□□□□ -1.35
SMC4-223ENST00000493695 THEMISQ8N1K5 641 aaPredicted RBP6.64□□□□□ -1.35
SMC4-223ENST00000493695 SHCBP1Q8NEM2 672 aa6.64□□□□□ -1.35
SMC4-223ENST00000493695 ERCC4Q92889 916 aaPredicted RBP6.64□□□□□ -1.35
SMC4-223ENST00000493695 OR10A5Q9H207 317 aa6.64□□□□□ -1.35
SMC4-223ENST00000493695 SLC26A4O43511 780 aa6.63□□□□□ -1.35
SMC4-223ENST00000493695 HERVK_113P62684 666 aa6.63□□□□□ -1.35
SMC4-223ENST00000493695 DUSP8Q13202 625 aa6.63□□□□□ -1.35
SMC4-223ENST00000493695 GRAMD4Q6IC98 578 aa6.63□□□□□ -1.35
SMC4-223ENST00000493695 CKAP2LQ8IYA6 745 aa6.63□□□□□ -1.35
SMC4-223ENST00000493695 GPR135Q8IZ08 494 aa6.63□□□□□ -1.35
SMC4-223ENST00000493695 CFHR4Q92496 578 aa6.63□□□□□ -1.35
SMC4-223ENST00000493695 CLIP3Q96DZ5 547 aa6.63□□□□□ -1.35
SMC4-223ENST00000493695 AMNQ9BXJ7 453 aa6.63□□□□□ -1.35
SMC4-223ENST00000493695 PARPBPQ9NWS1 579 aa6.63□□□□□ -1.35
SMC4-223ENST00000493695 AURKAIP1Q9NWT8 199 aaPredicted RBP6.63□□□□□ -1.35
SMC4-223ENST00000493695 BTBD7Q9P203 1132 aa6.63□□□□□ -1.35
SMC4-223ENST00000493695 A0A1W2PRX2 142 aa6.62□□□□□ -1.35
SMC4-223ENST00000493695 CYP27B1O15528 508 aa6.62□□□□□ -1.35
SMC4-223ENST00000493695 PDPK1O15530 556 aa6.62□□□□□ -1.35
SMC4-223ENST00000493695 CLASP2O75122 1294 aaKnown RBP6.62□□□□□ -1.35
SMC4-223ENST00000493695 CRTAMO95727 393 aa6.62□□□□□ -1.35
SMC4-223ENST00000493695 TMEM132BQ14DG7 1078 aa6.62□□□□□ -1.35
SMC4-223ENST00000493695 AMER2Q8N7J2 671 aa6.62□□□□□ -1.35
SMC4-223ENST00000493695 ZG16BQ96DA0 208 aa6.62□□□□□ -1.35
SMC4-223ENST00000493695 GBP4Q96PP9 640 aa6.62□□□□□ -1.35
SMC4-223ENST00000493695 SLC2A4RGQ9NR83 387 aa6.62□□□□□ -1.35
SMC4-223ENST00000493695 ZNF561-AS1K7EIQ3 104 aa6.61□□□□□ -1.35
SMC4-223ENST00000493695 GABREP78334 506 aa6.61□□□□□ -1.35
SMC4-223ENST00000493695 STILQ15468 1287 aa6.61□□□□□ -1.35
SMC4-223ENST00000493695 TRIM68Q6AZZ1 485 aa6.61□□□□□ -1.35
SMC4-223ENST00000493695 ADGRE4PQ86SQ3 457 aa6.61□□□□□ -1.35
SMC4-223ENST00000493695 DNAJC10Q8IXB1 793 aa6.61□□□□□ -1.35
SMC4-223ENST00000493695 LARP4BQ92615 738 aaKnown RBP6.61□□□□□ -1.35
SMC4-223ENST00000493695 SMURF1Q9HCE7 757 aa6.61□□□□□ -1.35
SMC4-223ENST00000493695 NDOR1Q9UHB4 597 aa6.61□□□□□ -1.35
SMC4-223ENST00000493695 GOLGA8BA8MQT2 603 aa6.6□□□□□ -1.35
SMC4-223ENST00000493695 ARVCFO00192 962 aa6.6□□□□□ -1.35
SMC4-223ENST00000493695 WNT9AO14904 365 aa6.6□□□□□ -1.35
SMC4-223ENST00000493695 STAT3P40763 770 aa6.6□□□□□ -1.35
SMC4-223ENST00000493695 NANOS3P60323 173 aaKnown RBP6.6□□□□□ -1.35
SMC4-223ENST00000493695 ADAM15Q13444 863 aa6.6□□□□□ -1.35
SMC4-223ENST00000493695 FOXB2Q5VYV0 432 aa6.6□□□□□ -1.35
SMC4-223ENST00000493695 MRGPRGQ86SM5 289 aa6.6□□□□□ -1.35
SMC4-223ENST00000493695 ZBTB38Q8NAP3 1195 aaPredicted RBP6.6□□□□□ -1.35
SMC4-223ENST00000493695 CALML6Q8TD86 181 aa6.6□□□□□ -1.35
SMC4-223ENST00000493695 ASB15Q8WXK1 588 aa6.6□□□□□ -1.35
SMC4-223ENST00000493695 ZNF669Q96BR6 464 aaPredicted RBP6.6□□□□□ -1.35
SMC4-223ENST00000493695 CRAMP1Q96RY5 1269 aa6.6□□□□□ -1.35
SMC4-223ENST00000493695 COQ6Q9Y2Z9 468 aa6.6□□□□□ -1.35
SMC4-223ENST00000493695 FOXP2O15409 715 aa6.59□□□□□ -1.35
SMC4-223ENST00000493695 RAMP2O60895 175 aa6.59□□□□□ -1.35
SMC4-223ENST00000493695 HIP1RO75146 1068 aa6.59□□□□□ -1.35
SMC4-223ENST00000493695 RPS6KA4O75676 772 aa6.59□□□□□ -1.35
SMC4-223ENST00000493695 MPIG6BO95866 241 aa6.59□□□□□ -1.35
SMC4-223ENST00000493695 TGM1P22735 817 aa6.59□□□□□ -1.35
SMC4-223ENST00000493695 FSTL1Q12841 308 aa6.59□□□□□ -1.35
SMC4-223ENST00000493695 MAP3K12Q12852 859 aa6.59□□□□□ -1.35
SMC4-223ENST00000493695 RIN1Q13671 783 aa6.59□□□□□ -1.35
SMC4-223ENST00000493695 CNGB1Q14028 1251 aaPredicted RBP6.59□□□□□ -1.35
SMC4-223ENST00000493695 SEC23AQ15436 765 aa6.59□□□□□ -1.35
SMC4-223ENST00000493695 FNDC7Q5VTL7 733 aa6.59□□□□□ -1.35
SMC4-223ENST00000493695 KANK2Q63ZY3 851 aa6.59□□□□□ -1.35
SMC4-223ENST00000493695 TMEM200BQ69YZ2 307 aa6.59□□□□□ -1.35
SMC4-223ENST00000493695 SLC43A3Q8NBI5 491 aa6.59□□□□□ -1.35
SMC4-223ENST00000493695 MSL2Q9HCI7 577 aa6.59□□□□□ -1.35
SMC4-223ENST00000493695 KCNH7Q9NS40 1196 aa6.59□□□□□ -1.35
SMC4-223ENST00000493695 MAGEL2Q9UJ55 1249 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms