RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 USP27XA6NNY8 438 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 SFI1A8K8P3 1242 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 K7ENM7 598 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 BACH1O14867 736 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 MAPTP10636 758 aaKnown RBP10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 CETPP11597 493 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 FECHP22830 423 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 NR2F2P24468 414 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 RPL13P26373 211 aaKnown RBP10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 NMT1P30419 496 aaKnown RBP10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 ACTR2P61160 394 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 ADAM9Q13443 819 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 ALCAMQ13740 583 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 NFIL3Q16649 462 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 XKR9Q5GH70 373 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 ODR4Q5SWX8 454 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 MIS18BP1Q6P0N0 1132 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 SHCBP1Q8NEM2 672 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 PPP1R13BQ96KQ4 1090 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 DRC1Q96MC2 740 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 NDST4Q9H3R1 872 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 MROH8Q9H579 483 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 TXNRD2Q9NNW7 524 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 ABHD10Q9NUJ1 306 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 TRMT1Q9NXH9 659 aaKnown RBP10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 RBPJLQ9UBG7 517 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 GABBR1Q9UBS5 961 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 SLC45A1Q9Y2W3 748 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 ZMYM2Q9UBW7 1377 aa10.08□□□□□ -0.8
SMARCC1-208ENST00000492896 ZNF236Q9UL36 1845 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 CCL15-CCL14A0A0B4J2E2 113 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 GOLGA6L9A6NEM1 432 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 KIF2AO00139 706 aaPredicted RBP10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 SLC16A3O15427 465 aaKnown RBP10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 ZSCAN12O43309 604 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 NR3C1P04150 777 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 SUPT20HL2P0C7V6 817 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 EPB41P11171 864 aaKnown RBP10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 TNNT1P13805 278 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 TRIM21P19474 475 aaKnown RBP10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 HOXD13P35453 343 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 KRT9P35527 623 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 GTF2A2P52657 109 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 ERVK-9P63128 1117 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 ERVK-24P63145 666 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 SP4Q02446 784 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 KCTD2Q14681 263 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 PTPN14Q15678 1187 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 CCL15Q16663 113 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 FIGNQ5HY92 759 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 PLA2G4FQ68DD2 849 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 SEPT14Q6ZU15 432 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 NYAP1Q6ZVC0 841 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 OTUD6AQ7L8S5 288 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 HS2ST1Q7LGA3 356 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 TRIM59Q8IWR1 403 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 DAW1Q8N136 415 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 C2orf69Q8N8R5 385 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 SLC17A8Q8NDX2 589 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 GOLGA5Q8TBA6 731 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 SMCR8Q8TEV9 937 aaPredicted RBP10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 FIZ1Q96SL8 496 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 BCAS3Q9H6U6 928 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 RRAGCQ9HB90 399 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 POLD4Q9HCU8 107 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 LARSQ9P2J5 1176 aaKnown RBP10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 FAM184BQ9ULE4 1060 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 CAPN11Q9UMQ6 739 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 R3HCC1Q9Y3T6 440 aaKnown RBP10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 PCDHB13Q9Y5F0 798 aa10.07□□□□□ -0.8
SMARCC1-208ENST00000492896 DNAJC25-GNG10A0A024R161 153 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 LOC102724159A0A0B4J2E5 919 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 A0A1W2PQJ5 194 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 TTC26A0AVF1 554 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 TMEM150BA6NC51 233 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 SOWAHDA6NJG2 315 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 NKRFO15226 690 aaKnown RBP eCLIP10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 PPP1R37O75864 691 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 CELF2O95319 508 aaKnown RBP10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 PLS3P13797 630 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 UBA1P22314 1058 aaKnown RBP10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 KLK7P49862 253 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 CCNA1P78396 465 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 PRKCEQ02156 737 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 PPP2R3AQ06190 1150 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 FSTL1Q12841 308 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 NEDD9Q14511 834 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 PWP2Q15269 919 aaKnown RBP10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 TSR1Q2NL82 804 aaKnown RBP10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 UTP14CQ5TAP6 766 aaKnown RBP10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 WDR78Q5VTH9 848 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 SWSAP1Q6NVH7 229 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 ABHD15Q6UXT9 468 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 CYP26C1Q6V0L0 522 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 MAEAQ7L5Y9 396 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 ZNF720Q7Z2F6 126 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 FRMD5Q7Z6J6 570 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 ANKRD23Q86SG2 305 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 TMTC1Q8IUR5 882 aa10.06□□□□□ -0.8
SMARCC1-208ENST00000492896 CCDC60Q8IWA6 550 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms