RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 STBD1O95210 358 aa24.5■■□□□ 1.51
PSPC1-204ENST00000492741 C6orf222P0C671 652 aaPredicted RBP24.5■■□□□ 1.51
PSPC1-204ENST00000492741 CACNB1Q02641 598 aaPredicted RBP24.5■■□□□ 1.51
PSPC1-204ENST00000492741 MTERF2Q49AM1 385 aa24.5■■□□□ 1.51
PSPC1-204ENST00000492741 MAP3K21Q5TCX8 1036 aa24.5■■□□□ 1.51
PSPC1-204ENST00000492741 ZHX3Q9H4I2 956 aa24.5■■□□□ 1.51
PSPC1-204ENST00000492741 EXOC1Q9NV70 894 aa24.5■■□□□ 1.51
PSPC1-204ENST00000492741 KCND2Q9NZV8 630 aa24.5■■□□□ 1.51
PSPC1-204ENST00000492741 TRPC6Q9Y210 931 aa24.5■■□□□ 1.51
PSPC1-204ENST00000492741 USO1O60763 962 aaKnown RBP24.49■■□□□ 1.51
PSPC1-204ENST00000492741 BEX3Q00994 111 aa24.49■■□□□ 1.51
PSPC1-204ENST00000492741 FSCN1Q16658 493 aaKnown RBP24.49■■□□□ 1.51
PSPC1-204ENST00000492741 KMT5BQ4FZB7 885 aa24.49■■□□□ 1.51
PSPC1-204ENST00000492741 C1orf186Q6ZWK4 172 aa24.49■■□□□ 1.51
PSPC1-204ENST00000492741 CCDC65Q8IXS2 484 aa24.49■■□□□ 1.51
PSPC1-204ENST00000492741 BBXQ8WY36 941 aaPredicted RBP24.49■■□□□ 1.51
PSPC1-204ENST00000492741 TSPY26PQ9H489 355 aa24.49■■□□□ 1.51
PSPC1-204ENST00000492741 HMX1Q9NP08 348 aaPredicted RBP24.49■■□□□ 1.51
PSPC1-204ENST00000492741 CYP26B1Q9NR63 512 aa24.49■■□□□ 1.51
PSPC1-204ENST00000492741 HSPA8P11142 646 aaKnown RBP24.49■■□□□ 1.51
PSPC1-204ENST00000492741 IRX5P78411 483 aaPredicted RBP24.49■■□□□ 1.51
PSPC1-204ENST00000492741 PLCB4Q15147 1175 aa24.49■■□□□ 1.51
PSPC1-204ENST00000492741 STX1AQ16623 288 aa24.49■■□□□ 1.51
PSPC1-204ENST00000492741 CNNM4Q6P4Q7 775 aa24.49■■□□□ 1.51
PSPC1-204ENST00000492741 UNC13DQ70J99 1090 aa24.49■■□□□ 1.51
PSPC1-204ENST00000492741 SH3TC2Q8TF17 1288 aa24.49■■□□□ 1.51
PSPC1-204ENST00000492741 ATP8B4Q8TF62 1192 aa24.49■■□□□ 1.51
PSPC1-204ENST00000492741 DNAJC19Q96DA6 116 aa24.49■■□□□ 1.51
PSPC1-204ENST00000492741 PANK4Q9NVE7 773 aa24.49■■□□□ 1.51
PSPC1-204ENST00000492741 ANO10Q9NW15 660 aa24.49■■□□□ 1.51
PSPC1-204ENST00000492741 WDR81Q562E7 1941 aa24.48■■□□□ 1.51
PSPC1-204ENST00000492741 PVALEFA0A1B0GWK0 134 aa24.48■■□□□ 1.51
PSPC1-204ENST00000492741 H3BRB1 525 aa24.48■■□□□ 1.51
PSPC1-204ENST00000492741 TBCAO75347 108 aaKnown RBP24.48■■□□□ 1.51
PSPC1-204ENST00000492741 PGK1P00558 417 aa24.48■■□□□ 1.51
PSPC1-204ENST00000492741 MYCNP04198 464 aaPredicted RBP24.48■■□□□ 1.51
PSPC1-204ENST00000492741 MYL3P08590 195 aa24.48■■□□□ 1.51
PSPC1-204ENST00000492741 HOXD8P13378 290 aaPredicted RBP24.48■■□□□ 1.51
PSPC1-204ENST00000492741 GJA9P57773 515 aa24.48■■□□□ 1.51
PSPC1-204ENST00000492741 NLRP12P59046 1061 aa24.48■■□□□ 1.51
PSPC1-204ENST00000492741 GIT2Q14161 759 aa24.48■■□□□ 1.51
PSPC1-204ENST00000492741 GNASQ5JWF2 1037 aa24.48■■□□□ 1.51
PSPC1-204ENST00000492741 MAEAQ7L5Y9 396 aa24.48■■□□□ 1.51
PSPC1-204ENST00000492741 TRIML1Q8N9V2 468 aa24.48■■□□□ 1.51
PSPC1-204ENST00000492741 REEP2Q9BRK0 252 aa24.48■■□□□ 1.51
PSPC1-204ENST00000492741 C16orf70Q9BSU1 422 aa24.48■■□□□ 1.51
PSPC1-204ENST00000492741 NIFKQ9BYG3 293 aaKnown RBP24.48■■□□□ 1.51
PSPC1-204ENST00000492741 TUT1Q9H6E5 874 aaKnown RBP24.48■■□□□ 1.51
PSPC1-204ENST00000492741 XPNPEP3Q9NQH7 507 aa24.48■■□□□ 1.51
PSPC1-204ENST00000492741 KLRC4O43908 158 aa24.47■■□□□ 1.51
PSPC1-204ENST00000492741 HSPA1AP0DMV8 641 aaKnown RBP24.47■■□□□ 1.51
PSPC1-204ENST00000492741 HSPA1BP0DMV9 641 aaKnown RBP24.47■■□□□ 1.51
PSPC1-204ENST00000492741 LBX1P52954 281 aa24.47■■□□□ 1.51
PSPC1-204ENST00000492741 CHMP4BP1P59074 171 aa24.47■■□□□ 1.51
PSPC1-204ENST00000492741 KCNB1Q14721 858 aa24.47■■□□□ 1.51
PSPC1-204ENST00000492741 FUCA2Q9BTY2 467 aa24.47■■□□□ 1.51
PSPC1-204ENST00000492741 POLD4Q9HCU8 107 aa24.47■■□□□ 1.51
PSPC1-204ENST00000492741 DDX20Q9UHI6 824 aaKnown RBP24.47■■□□□ 1.51
PSPC1-204ENST00000492741 SYNRGQ9UMZ2 1314 aa24.47■■□□□ 1.51
PSPC1-204ENST00000492741 HBP1O60381 514 aa24.47■■□□□ 1.51
PSPC1-204ENST00000492741 CTCFP49711 727 aaPredicted RBP24.47■■□□□ 1.51
PSPC1-204ENST00000492741 SLC9C1Q4G0N8 1177 aa24.47■■□□□ 1.51
PSPC1-204ENST00000492741 RNPEPQ9H4A4 650 aa24.47■■□□□ 1.51
PSPC1-204ENST00000492741 LOXHD1Q8IVV2 1947 aa24.46■■□□□ 1.51
PSPC1-204ENST00000492741 ZEB2O60315 1214 aa24.46■■□□□ 1.51
PSPC1-204ENST00000492741 DGAT1O75907 488 aa24.46■■□□□ 1.51
PSPC1-204ENST00000492741 FAM13AO94988 1023 aa24.46■■□□□ 1.51
PSPC1-204ENST00000492741 GUCY2CP25092 1073 aa24.46■■□□□ 1.51
PSPC1-204ENST00000492741 POLGP54098 1239 aaPredicted RBP24.46■■□□□ 1.51
PSPC1-204ENST00000492741 MORC3Q14149 939 aa24.46■■□□□ 1.51
PSPC1-204ENST00000492741 HERC4Q5GLZ8 1057 aaPredicted RBP24.46■■□□□ 1.51
PSPC1-204ENST00000492741 MSCO60682 206 aa24.45■■□□□ 1.5
PSPC1-204ENST00000492741 RHOBTB3O94955 611 aa24.45■■□□□ 1.5
PSPC1-204ENST00000492741 ANO6Q4KMQ2 910 aa24.45■■□□□ 1.5
PSPC1-204ENST00000492741 UPF3AQ9H1J1 476 aaKnown RBP24.45■■□□□ 1.5
PSPC1-204ENST00000492741 ODF2LQ9ULJ1 636 aa24.45■■□□□ 1.5
PSPC1-204ENST00000492741 COL4A3BPQ9Y5P4 624 aa24.45■■□□□ 1.5
PSPC1-204ENST00000492741 HIP1RO75146 1068 aa24.44■■□□□ 1.5
PSPC1-204ENST00000492741 COASYQ13057 564 aa24.44■■□□□ 1.5
PSPC1-204ENST00000492741 FAM102BQ5T8I3 360 aa24.44■■□□□ 1.5
PSPC1-204ENST00000492741 CTU1Q7Z7A3 348 aaKnown RBP24.44■■□□□ 1.5
PSPC1-204ENST00000492741 SLC7A3Q8WY07 619 aa24.44■■□□□ 1.5
PSPC1-204ENST00000492741 TIPINQ9BVW5 301 aa24.44■■□□□ 1.5
PSPC1-204ENST00000492741 ATP6V0A4Q9HBG4 840 aa24.44■■□□□ 1.5
PSPC1-204ENST00000492741 MYADML2A6NDP7 307 aa24.44■■□□□ 1.5
PSPC1-204ENST00000492741 SFI1A8K8P3 1242 aa24.44■■□□□ 1.5
PSPC1-204ENST00000492741 RSPH10B2B2RC85 870 aa24.44■■□□□ 1.5
PSPC1-204ENST00000492741 KPNA6O60684 536 aa24.44■■□□□ 1.5
PSPC1-204ENST00000492741 RSPH10BP0C881 870 aa24.44■■□□□ 1.5
PSPC1-204ENST00000492741 TBC1D8BQ0IIM8 1120 aa24.44■■□□□ 1.5
PSPC1-204ENST00000492741 DPCR1Q3MIW9 517 aa24.44■■□□□ 1.5
PSPC1-204ENST00000492741 ZNF658Q5TYW1 1059 aaPredicted RBP24.44■■□□□ 1.5
PSPC1-204ENST00000492741 MYCT1Q8N699 235 aa24.44■■□□□ 1.5
PSPC1-204ENST00000492741 DNAJC25Q9H1X3 360 aa24.44■■□□□ 1.5
PSPC1-204ENST00000492741 IGBP1P78318 339 aa24.43■■□□□ 1.5
PSPC1-204ENST00000492741 MCPH1Q8NEM0 835 aa24.43■■□□□ 1.5
PSPC1-204ENST00000492741 PPME1Q9Y570 386 aa24.43■■□□□ 1.5
PSPC1-204ENST00000492741 CENPFP49454 3210 aa24.42■■□□□ 1.5
PSPC1-204ENST00000492741 MYCP01106 439 aaPredicted RBP24.42■■□□□ 1.5
PSPC1-204ENST00000492741 INSRRP14616 1297 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms