RNA–Protein interactions for RNA: ENST00000491584.1

PTPN7-214, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-214ENST00000491584 IGBP1P78318 339 aa13.36□□□□□ -0.27
PTPN7-214ENST00000491584 KRT85P78386 507 aa13.36□□□□□ -0.27
PTPN7-214ENST00000491584 CEBPZQ03701 1054 aaKnown RBP13.36□□□□□ -0.27
PTPN7-214ENST00000491584 RASIP1Q5U651 963 aa13.36□□□□□ -0.27
PTPN7-214ENST00000491584 C16orf59Q7L2K0 433 aa13.36□□□□□ -0.27
PTPN7-214ENST00000491584 TRMT1LQ7Z2T5 733 aaKnown RBP13.36□□□□□ -0.27
PTPN7-214ENST00000491584 TMEM199Q8N511 208 aa13.36□□□□□ -0.27
PTPN7-214ENST00000491584 KRI1Q8N9T8 703 aaKnown RBP13.36□□□□□ -0.27
PTPN7-214ENST00000491584 MAFAQ8NHW3 353 aaPredicted RBP13.36□□□□□ -0.27
PTPN7-214ENST00000491584 CALML4Q96GE6 196 aa13.36□□□□□ -0.27
PTPN7-214ENST00000491584 DYDC2Q96IM9 177 aa13.36□□□□□ -0.27
PTPN7-214ENST00000491584 PCYT2Q99447 389 aa13.36□□□□□ -0.27
PTPN7-214ENST00000491584 NIFKQ9BYG3 293 aaKnown RBP13.36□□□□□ -0.27
PTPN7-214ENST00000491584 SCAND2PQ9GZW5 306 aaPredicted RBP13.36□□□□□ -0.27
PTPN7-214ENST00000491584 NT5C3AQ9H0P0 336 aa13.36□□□□□ -0.27
PTPN7-214ENST00000491584 ANKEF1Q9NU02 776 aa13.36□□□□□ -0.27
PTPN7-214ENST00000491584 TFIP11Q9UBB9 837 aaKnown RBP13.36□□□□□ -0.27
PTPN7-214ENST00000491584 DNM3Q9UQ16 869 aa13.36□□□□□ -0.27
PTPN7-214ENST00000491584 RBM19Q9Y4C8 960 aaKnown RBP13.36□□□□□ -0.27
PTPN7-214ENST00000491584 MORC2Q9Y6X9 1032 aaPredicted RBP13.36□□□□□ -0.27
PTPN7-214ENST00000491584 EML1O00423 815 aa13.35□□□□□ -0.27
PTPN7-214ENST00000491584 SPTLC2O15270 562 aa13.35□□□□□ -0.27
PTPN7-214ENST00000491584 LYPLA2O95372 231 aa13.35□□□□□ -0.27
PTPN7-214ENST00000491584 KLRC1P26715 233 aa13.35□□□□□ -0.27
PTPN7-214ENST00000491584 PRKCEQ02156 737 aa13.35□□□□□ -0.27
PTPN7-214ENST00000491584 SPIRE1Q08AE8 756 aa13.35□□□□□ -0.27
PTPN7-214ENST00000491584 TBC1D8BQ0IIM8 1120 aa13.35□□□□□ -0.27
PTPN7-214ENST00000491584 IER5Q5VY09 327 aa13.35□□□□□ -0.27
PTPN7-214ENST00000491584 GDF6Q6KF10 455 aaPredicted RBP13.35□□□□□ -0.27
PTPN7-214ENST00000491584 FAM43BQ6ZT52 329 aaPredicted RBP13.35□□□□□ -0.27
PTPN7-214ENST00000491584 RPUSD2Q8IZ73 545 aaKnown RBP13.35□□□□□ -0.27
PTPN7-214ENST00000491584 IGSF22Q8N9C0 903 aa13.35□□□□□ -0.27
PTPN7-214ENST00000491584 BANK1Q8NDB2 785 aa13.35□□□□□ -0.27
PTPN7-214ENST00000491584 SLC7A3Q8WY07 619 aa13.35□□□□□ -0.27
PTPN7-214ENST00000491584 RNPC3Q96LT9 517 aaKnown RBP13.35□□□□□ -0.27
PTPN7-214ENST00000491584 LXNQ9BS40 222 aa13.35□□□□□ -0.27
PTPN7-214ENST00000491584 HIPK3Q9H422 1215 aa13.35□□□□□ -0.27
PTPN7-214ENST00000491584 TRMT13Q9NUP7 481 aaKnown RBP13.35□□□□□ -0.27
PTPN7-214ENST00000491584 RGL1Q9NZL6 768 aa13.35□□□□□ -0.27
PTPN7-214ENST00000491584 CCDC39Q9UFE4 941 aa13.35□□□□□ -0.27
PTPN7-214ENST00000491584 SEPT9Q9UHD8 586 aaPredicted RBP13.35□□□□□ -0.27
PTPN7-214ENST00000491584 TUBE1Q9UJT0 475 aa13.35□□□□□ -0.27
PTPN7-214ENST00000491584 PCDHA2Q9Y5H9 948 aa13.35□□□□□ -0.27
PTPN7-214ENST00000491584 SRPRBQ9Y5M8 271 aaKnown RBP13.35□□□□□ -0.27
PTPN7-214ENST00000491584 CLIC4Q9Y696 253 aa13.35□□□□□ -0.27
PTPN7-214ENST00000491584 KDM3AQ9Y4C1 1321 aa13.35□□□□□ -0.27
PTPN7-214ENST00000491584 POTEMA6NI47 508 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 PITPNM1O00562 1244 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 WNT7AO00755 349 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 GAS2O43903 313 aaKnown RBP13.34□□□□□ -0.27
PTPN7-214ENST00000491584 B4GALT4O60513 344 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 PPP6R2O75170 966 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 TIMP1P01033 207 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 CYP2C9P11712 490 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 YWHABP31946 246 aaKnown RBP13.34□□□□□ -0.27
PTPN7-214ENST00000491584 RFC5P40937 340 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 NASPP49321 788 aaPredicted RBP13.34□□□□□ -0.27
PTPN7-214ENST00000491584 CYP4A11Q02928 519 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 FPGSQ05932 587 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 CTTNQ14247 550 aaKnown RBP13.34□□□□□ -0.27
PTPN7-214ENST00000491584 CSPP1Q1MSJ5 1256 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 XKR9Q5GH70 373 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 FAM173BQ6P4H8 233 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 SERINC5Q86VE9 423 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 METTL13Q8N6R0 699 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 SNX29Q8TEQ0 813 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 LMBR1Q8WVP7 490 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 CEP170P1Q96L14 293 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 IPO9Q96P70 1041 aaKnown RBP13.34□□□□□ -0.27
PTPN7-214ENST00000491584 USP28Q96RU2 1077 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 MAP7D2Q96T17 732 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 CHMP5Q9NZZ3 219 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 TELO2Q9Y4R8 837 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 MYH7BA7E2Y1 1941 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 IGSF9BQ9UPX0 1349 aa13.34□□□□□ -0.27
PTPN7-214ENST00000491584 SMIM35A0A1B0GVV1 85 aa13.33□□□□□ -0.28
PTPN7-214ENST00000491584 MBLAC1A4D2B0 266 aaPredicted RBP13.33□□□□□ -0.28
PTPN7-214ENST00000491584 TREHO43280 583 aa13.33□□□□□ -0.28
PTPN7-214ENST00000491584 RFC2P35250 354 aa13.33□□□□□ -0.28
PTPN7-214ENST00000491584 THPOP40225 353 aa13.33□□□□□ -0.28
PTPN7-214ENST00000491584 ME1P48163 572 aa13.33□□□□□ -0.28
PTPN7-214ENST00000491584 GRIN2CQ14957 1233 aa13.33□□□□□ -0.28
PTPN7-214ENST00000491584 ZRSR1Q15695 479 aaKnown RBP13.33□□□□□ -0.28
PTPN7-214ENST00000491584 FOXD4L6Q3SYB3 417 aaPredicted RBP13.33□□□□□ -0.28
PTPN7-214ENST00000491584 ODR4Q5SWX8 454 aa13.33□□□□□ -0.28
PTPN7-214ENST00000491584 MTHFD1LQ6UB35 978 aa13.33□□□□□ -0.28
PTPN7-214ENST00000491584 FOXD4L3Q6VB84 417 aaPredicted RBP13.33□□□□□ -0.28
PTPN7-214ENST00000491584 CATSPER3Q86XQ3 398 aa13.33□□□□□ -0.28
PTPN7-214ENST00000491584 USP38Q8NB14 1042 aa13.33□□□□□ -0.28
PTPN7-214ENST00000491584 LINC00301Q8NCQ3 95 aa13.33□□□□□ -0.28
PTPN7-214ENST00000491584 TCP11Q8WWU5 503 aa13.33□□□□□ -0.28
PTPN7-214ENST00000491584 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.33□□□□□ -0.28
PTPN7-214ENST00000491584 CYP26B1Q9NR63 512 aa13.33□□□□□ -0.28
PTPN7-214ENST00000491584 KCNG1Q9UIX4 513 aa13.33□□□□□ -0.28
PTPN7-214ENST00000491584 DBR1Q9UK59 544 aaKnown RBP13.33□□□□□ -0.28
PTPN7-214ENST00000491584 TTC28Q96AY4 2481 aa13.32□□□□□ -0.28
PTPN7-214ENST00000491584 ARHGEF35A5YM69 484 aa13.32□□□□□ -0.28
PTPN7-214ENST00000491584 GOLGA6L4A6NEF3 574 aa13.32□□□□□ -0.28
PTPN7-214ENST00000491584 ZNF862O60290 1169 aa13.32□□□□□ -0.28
PTPN7-214ENST00000491584 CUTAO60888 179 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms