RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 CD320Q9NPF0 282 aa17.83■□□□□ 0.44
SMPD4-220ENST00000491319 VPS54Q9P1Q0 977 aa17.83■□□□□ 0.44
SMPD4-220ENST00000491319 MRPL42Q9Y6G3 142 aaKnown RBP17.83■□□□□ 0.44
SMPD4-220ENST00000491319 H3BQ06 376 aaPredicted RBP17.82■□□□□ 0.44
SMPD4-220ENST00000491319 IFNAR1P17181 557 aa17.82■□□□□ 0.44
SMPD4-220ENST00000491319 IBSPP21815 317 aaPredicted RBP17.82■□□□□ 0.44
SMPD4-220ENST00000491319 PDIA3P30101 505 aaKnown RBP17.82■□□□□ 0.44
SMPD4-220ENST00000491319 GATMP50440 423 aa17.82■□□□□ 0.44
SMPD4-220ENST00000491319 TOB2Q14106 344 aaPredicted RBP17.82■□□□□ 0.44
SMPD4-220ENST00000491319 PAN2Q504Q3 1202 aaKnown RBP17.82■□□□□ 0.44
SMPD4-220ENST00000491319 ZNF746Q6NUN9 644 aaPredicted RBP17.82■□□□□ 0.44
SMPD4-220ENST00000491319 EP400NLQ6ZTU2 488 aa17.82■□□□□ 0.44
SMPD4-220ENST00000491319 TRMT1LQ7Z2T5 733 aaKnown RBP17.82■□□□□ 0.44
SMPD4-220ENST00000491319 CKAP2LQ8IYA6 745 aa17.82■□□□□ 0.44
SMPD4-220ENST00000491319 KIAA0319LQ8IZA0 1049 aa17.82■□□□□ 0.44
SMPD4-220ENST00000491319 NEK9Q8TD19 979 aa17.82■□□□□ 0.44
SMPD4-220ENST00000491319 TMEM40Q8WWA1 233 aa17.82■□□□□ 0.44
SMPD4-220ENST00000491319 PABPC5Q96DU9 382 aaKnown RBP17.82■□□□□ 0.44
SMPD4-220ENST00000491319 CDHR5Q9HBB8 845 aa17.82■□□□□ 0.44
SMPD4-220ENST00000491319 TBC1D22BQ9NU19 505 aa17.82■□□□□ 0.44
SMPD4-220ENST00000491319 MGEA5O60502 916 aa17.81■□□□□ 0.44
SMPD4-220ENST00000491319 C22orf31O95567 290 aa17.81■□□□□ 0.44
SMPD4-220ENST00000491319 CIITAP33076 1130 aa17.81■□□□□ 0.44
SMPD4-220ENST00000491319 EVCP57679 992 aa17.81■□□□□ 0.44
SMPD4-220ENST00000491319 NFX1Q12986 1120 aaKnown RBP17.81■□□□□ 0.44
SMPD4-220ENST00000491319 COL19A1Q14993 1142 aa17.81■□□□□ 0.44
SMPD4-220ENST00000491319 ZNF484Q5JVG2 852 aa17.81■□□□□ 0.44
SMPD4-220ENST00000491319 PTCRAQ6ISU1 281 aaPredicted RBP17.81■□□□□ 0.44
SMPD4-220ENST00000491319 RUFY3Q7L099 469 aa17.81■□□□□ 0.44
SMPD4-220ENST00000491319 SMAP1Q8IYB5 467 aaPredicted RBP17.81■□□□□ 0.44
SMPD4-220ENST00000491319 CMTR2Q8IYT2 770 aaKnown RBP17.81■□□□□ 0.44
SMPD4-220ENST00000491319 BICD2Q8TD16 824 aa17.81■□□□□ 0.44
SMPD4-220ENST00000491319 BBXQ8WY36 941 aaPredicted RBP17.81■□□□□ 0.44
SMPD4-220ENST00000491319 LMAN2LQ9H0V9 348 aa17.81■□□□□ 0.44
SMPD4-220ENST00000491319 ERVK-5Q9HDB9 667 aa17.81■□□□□ 0.44
SMPD4-220ENST00000491319 TCEAL9Q9UHQ7 104 aa17.81■□□□□ 0.44
SMPD4-220ENST00000491319 NOC2LQ9Y3T9 749 aaKnown RBP17.81■□□□□ 0.44
SMPD4-220ENST00000491319 MAFBQ9Y5Q3 323 aaPredicted RBP17.81■□□□□ 0.44
SMPD4-220ENST00000491319 EDIL3O43854 480 aa17.8■□□□□ 0.44
SMPD4-220ENST00000491319 RPS6KA5O75582 802 aa17.8■□□□□ 0.44
SMPD4-220ENST00000491319 PSAPP07602 524 aa17.8■□□□□ 0.44
SMPD4-220ENST00000491319 STAG3L1P0CL83 205 aa17.8■□□□□ 0.44
SMPD4-220ENST00000491319 FAM178BQ8IXR5 827 aa17.8■□□□□ 0.44
SMPD4-220ENST00000491319 C1QTNF1Q9BXJ1 281 aa17.8■□□□□ 0.44
SMPD4-220ENST00000491319 ALG13Q9NP73 1137 aaKnown RBP17.8■□□□□ 0.44
SMPD4-220ENST00000491319 CLDND1Q9NY35 253 aa17.8■□□□□ 0.44
SMPD4-220ENST00000491319 GABBR1Q9UBS5 961 aa17.8■□□□□ 0.44
SMPD4-220ENST00000491319 SAMM50Q9Y512 469 aa17.8■□□□□ 0.44
SMPD4-220ENST00000491319 PCDHA10Q9Y5I2 948 aa17.8■□□□□ 0.44
SMPD4-220ENST00000491319 GRXCR2A6NFK2 248 aa17.79■□□□□ 0.44
SMPD4-220ENST00000491319 MMP1P03956 469 aa17.79■□□□□ 0.44
SMPD4-220ENST00000491319 VTNP04004 478 aa17.79■□□□□ 0.44
SMPD4-220ENST00000491319 KIZQ2M2Z5 673 aa17.79■□□□□ 0.44
SMPD4-220ENST00000491319 METTL13Q8N6R0 699 aa17.79■□□□□ 0.44
SMPD4-220ENST00000491319 OSMRQ99650 979 aa17.79■□□□□ 0.44
SMPD4-220ENST00000491319 LARP6Q9BRS8 491 aaKnown RBP17.79■□□□□ 0.44
SMPD4-220ENST00000491319 PLVAPQ9BX97 442 aa17.79■□□□□ 0.44
SMPD4-220ENST00000491319 ZSWIM6Q9HCJ5 1215 aa17.79■□□□□ 0.44
SMPD4-220ENST00000491319 LRFN2Q9ULH4 789 aa17.79■□□□□ 0.44
SMPD4-220ENST00000491319 C5orf42Q9H799 3197 aa17.79■□□□□ 0.44
SMPD4-220ENST00000491319 WDR64B1ANS9 1081 aa17.78■□□□□ 0.44
SMPD4-220ENST00000491319 MSH4O15457 936 aa17.78■□□□□ 0.44
SMPD4-220ENST00000491319 ITGB1P05556 798 aa17.78■□□□□ 0.44
SMPD4-220ENST00000491319 SARSP49591 514 aaKnown RBP17.78■□□□□ 0.44
SMPD4-220ENST00000491319 CLCN3P51790 818 aa17.78■□□□□ 0.44
SMPD4-220ENST00000491319 NLRP5P59047 1200 aa17.78■□□□□ 0.44
SMPD4-220ENST00000491319 HYAL1Q12794 435 aa17.78■□□□□ 0.44
SMPD4-220ENST00000491319 CAMK1Q14012 370 aa17.78■□□□□ 0.44
SMPD4-220ENST00000491319 FAM228AQ86W67 206 aa17.78■□□□□ 0.44
SMPD4-220ENST00000491319 P2RX5Q93086 422 aa17.78■□□□□ 0.44
SMPD4-220ENST00000491319 GJA10Q969M2 543 aa17.78■□□□□ 0.44
SMPD4-220ENST00000491319 ADAM2Q99965 735 aa17.78■□□□□ 0.44
SMPD4-220ENST00000491319 UPF3BQ9BZI7 483 aaKnown RBP17.78■□□□□ 0.44
SMPD4-220ENST00000491319 SH3GLB2Q9NR46 395 aa17.78■□□□□ 0.44
SMPD4-220ENST00000491319 ST3GAL5Q9UNP4 418 aa17.78■□□□□ 0.44
SMPD4-220ENST00000491319 PLAGL2Q9UPG8 496 aa17.78■□□□□ 0.44
SMPD4-220ENST00000491319 DENND3A2RUS2 1198 aa17.77■□□□□ 0.44
SMPD4-220ENST00000491319 CHMP2AO43633 222 aa17.77■□□□□ 0.44
SMPD4-220ENST00000491319 ZNF862O60290 1169 aa17.77■□□□□ 0.44
SMPD4-220ENST00000491319 GPR32O75388 356 aa17.77■□□□□ 0.44
SMPD4-220ENST00000491319 DNAJB1P25685 340 aa17.77■□□□□ 0.44
SMPD4-220ENST00000491319 GTF2F1P35269 517 aaKnown RBP eCLIP17.77■□□□□ 0.44
SMPD4-220ENST00000491319 LTBRP36941 435 aa17.77■□□□□ 0.44
SMPD4-220ENST00000491319 TRIM22Q8IYM9 498 aa17.77■□□□□ 0.44
SMPD4-220ENST00000491319 FAM167AQ96KS9 214 aa17.77■□□□□ 0.44
SMPD4-220ENST00000491319 DISC1Q9NRI5 854 aa17.77■□□□□ 0.44
SMPD4-220ENST00000491319 CEP131Q9UPN4 1083 aa17.77■□□□□ 0.44
SMPD4-220ENST00000491319 CYP46A1Q9Y6A2 500 aa17.77■□□□□ 0.44
SMPD4-220ENST00000491319 ARID2Q68CP9 1835 aa17.77■□□□□ 0.43
SMPD4-220ENST00000491319 EPB41L2O43491 1005 aaKnown RBP17.76■□□□□ 0.43
SMPD4-220ENST00000491319 GAS7O60861 476 aa17.76■□□□□ 0.43
SMPD4-220ENST00000491319 TBX10O75333 385 aa17.76■□□□□ 0.43
SMPD4-220ENST00000491319 OATP04181 439 aa17.76■□□□□ 0.43
SMPD4-220ENST00000491319 SSTR3P32745 418 aaPredicted RBP17.76■□□□□ 0.43
SMPD4-220ENST00000491319 CRYBB1P53674 252 aaPredicted RBP17.76■□□□□ 0.43
SMPD4-220ENST00000491319 PRKCEQ02156 737 aa17.76■□□□□ 0.43
SMPD4-220ENST00000491319 DLX2Q07687 328 aaPredicted RBP17.76■□□□□ 0.43
SMPD4-220ENST00000491319 SSRP1Q08945 709 aaKnown RBP17.76■□□□□ 0.43
SMPD4-220ENST00000491319 STK3Q13188 491 aa17.76■□□□□ 0.43
SMPD4-220ENST00000491319 UGCGQ16739 394 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms