RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 ZBTB42B2RXF5 422 aa15.46■□□□□ 0.07
COL6A3-211ENST00000491233 GRM6O15303 877 aa15.46■□□□□ 0.07
COL6A3-211ENST00000491233 CSPG5O95196 566 aa15.46■□□□□ 0.07
COL6A3-211ENST00000491233 C22orf31O95567 290 aa15.46■□□□□ 0.07
COL6A3-211ENST00000491233 IL9P15248 144 aa15.46■□□□□ 0.07
COL6A3-211ENST00000491233 IBSPP21815 317 aaPredicted RBP15.46■□□□□ 0.07
COL6A3-211ENST00000491233 CIITAP33076 1130 aa15.46■□□□□ 0.07
COL6A3-211ENST00000491233 NFX1Q12986 1120 aaKnown RBP15.46■□□□□ 0.07
COL6A3-211ENST00000491233 TOB2Q14106 344 aaPredicted RBP15.46■□□□□ 0.07
COL6A3-211ENST00000491233 PAN2Q504Q3 1202 aaKnown RBP15.46■□□□□ 0.07
COL6A3-211ENST00000491233 RUFY3Q7L099 469 aa15.46■□□□□ 0.07
COL6A3-211ENST00000491233 TRMT1LQ7Z2T5 733 aaKnown RBP15.46■□□□□ 0.07
COL6A3-211ENST00000491233 CMTR2Q8IYT2 770 aaKnown RBP15.46■□□□□ 0.07
COL6A3-211ENST00000491233 KIAA0319LQ8IZA0 1049 aa15.46■□□□□ 0.07
COL6A3-211ENST00000491233 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.46■□□□□ 0.07
COL6A3-211ENST00000491233 BBXQ8WY36 941 aaPredicted RBP15.46■□□□□ 0.07
COL6A3-211ENST00000491233 LENG9Q96B70 501 aa15.46■□□□□ 0.07
COL6A3-211ENST00000491233 PPP1R16BQ96T49 567 aa15.46■□□□□ 0.07
COL6A3-211ENST00000491233 LMAN2LQ9H0V9 348 aa15.46■□□□□ 0.07
COL6A3-211ENST00000491233 ERVK-5Q9HDB9 667 aa15.46■□□□□ 0.07
COL6A3-211ENST00000491233 MAFBQ9Y5Q3 323 aaPredicted RBP15.46■□□□□ 0.07
COL6A3-211ENST00000491233 MYO7AQ13402 2215 aa15.45■□□□□ 0.06
COL6A3-211ENST00000491233 H3BQ06 376 aaPredicted RBP15.45■□□□□ 0.06
COL6A3-211ENST00000491233 PSAPP07602 524 aa15.45■□□□□ 0.06
COL6A3-211ENST00000491233 STAG3L1P0CL83 205 aa15.45■□□□□ 0.06
COL6A3-211ENST00000491233 GATMP50440 423 aa15.45■□□□□ 0.06
COL6A3-211ENST00000491233 NLRP5P59047 1200 aa15.45■□□□□ 0.06
COL6A3-211ENST00000491233 PTCRAQ6ISU1 281 aaPredicted RBP15.45■□□□□ 0.06
COL6A3-211ENST00000491233 EP400NLQ6ZTU2 488 aa15.45■□□□□ 0.06
COL6A3-211ENST00000491233 TRIM22Q8IYM9 498 aa15.45■□□□□ 0.06
COL6A3-211ENST00000491233 CRIPAKQ8N1N5 446 aa15.45■□□□□ 0.06
COL6A3-211ENST00000491233 TMEM40Q8WWA1 233 aa15.45■□□□□ 0.06
COL6A3-211ENST00000491233 PABPC5Q96DU9 382 aaKnown RBP15.45■□□□□ 0.06
COL6A3-211ENST00000491233 CDHR5Q9HBB8 845 aa15.45■□□□□ 0.06
COL6A3-211ENST00000491233 ZSWIM6Q9HCJ5 1215 aa15.45■□□□□ 0.06
COL6A3-211ENST00000491233 GABBR1Q9UBS5 961 aa15.45■□□□□ 0.06
COL6A3-211ENST00000491233 NOC2LQ9Y3T9 749 aaKnown RBP15.45■□□□□ 0.06
COL6A3-211ENST00000491233 SAMM50Q9Y512 469 aa15.45■□□□□ 0.06
COL6A3-211ENST00000491233 PCDHA10Q9Y5I2 948 aa15.45■□□□□ 0.06
COL6A3-211ENST00000491233 WDR64B1ANS9 1081 aa15.44■□□□□ 0.06
COL6A3-211ENST00000491233 EPB41L2O43491 1005 aaKnown RBP15.44■□□□□ 0.06
COL6A3-211ENST00000491233 MGEA5O60502 916 aa15.44■□□□□ 0.06
COL6A3-211ENST00000491233 RPS6KA5O75582 802 aa15.44■□□□□ 0.06
COL6A3-211ENST00000491233 MMP1P03956 469 aa15.44■□□□□ 0.06
COL6A3-211ENST00000491233 COL19A1Q14993 1142 aa15.44■□□□□ 0.06
COL6A3-211ENST00000491233 NEK9Q8TD19 979 aa15.44■□□□□ 0.06
COL6A3-211ENST00000491233 FAM167AQ96KS9 214 aa15.44■□□□□ 0.06
COL6A3-211ENST00000491233 OSMRQ99650 979 aa15.44■□□□□ 0.06
COL6A3-211ENST00000491233 PLVAPQ9BX97 442 aa15.44■□□□□ 0.06
COL6A3-211ENST00000491233 C1QTNF1Q9BXJ1 281 aa15.44■□□□□ 0.06
COL6A3-211ENST00000491233 UPF3BQ9BZI7 483 aaKnown RBP15.44■□□□□ 0.06
COL6A3-211ENST00000491233 EPHX3Q9H6B9 360 aa15.44■□□□□ 0.06
COL6A3-211ENST00000491233 SH3GLB2Q9NR46 395 aa15.44■□□□□ 0.06
COL6A3-211ENST00000491233 CLDND1Q9NY35 253 aa15.44■□□□□ 0.06
COL6A3-211ENST00000491233 RAPGEFL1Q9UHV5 662 aa15.44■□□□□ 0.06
COL6A3-211ENST00000491233 LRFN2Q9ULH4 789 aa15.44■□□□□ 0.06
COL6A3-211ENST00000491233 CEP131Q9UPN4 1083 aa15.44■□□□□ 0.06
COL6A3-211ENST00000491233 CYP46A1Q9Y6A2 500 aa15.44■□□□□ 0.06
COL6A3-211ENST00000491233 BDP1A6H8Y1 2624 aa15.44■□□□□ 0.06
COL6A3-211ENST00000491233 MSH4O15457 936 aa15.43■□□□□ 0.06
COL6A3-211ENST00000491233 CHMP2AO43633 222 aa15.43■□□□□ 0.06
COL6A3-211ENST00000491233 EDIL3O43854 480 aa15.43■□□□□ 0.06
COL6A3-211ENST00000491233 VTNP04004 478 aa15.43■□□□□ 0.06
COL6A3-211ENST00000491233 SARSP49591 514 aaKnown RBP15.43■□□□□ 0.06
COL6A3-211ENST00000491233 CLCN3P51790 818 aa15.43■□□□□ 0.06
COL6A3-211ENST00000491233 SSRP1Q08945 709 aaKnown RBP15.43■□□□□ 0.06
COL6A3-211ENST00000491233 KIZQ2M2Z5 673 aa15.43■□□□□ 0.06
COL6A3-211ENST00000491233 METTL13Q8N6R0 699 aa15.43■□□□□ 0.06
COL6A3-211ENST00000491233 KHSRPQ92945 711 aaKnown RBP eCLIP15.43■□□□□ 0.06
COL6A3-211ENST00000491233 P2RX5Q93086 422 aa15.43■□□□□ 0.06
COL6A3-211ENST00000491233 LARP6Q9BRS8 491 aaKnown RBP15.43■□□□□ 0.06
COL6A3-211ENST00000491233 ALG13Q9NP73 1137 aaKnown RBP15.43■□□□□ 0.06
COL6A3-211ENST00000491233 CD320Q9NPF0 282 aa15.43■□□□□ 0.06
COL6A3-211ENST00000491233 DISC1Q9NRI5 854 aa15.43■□□□□ 0.06
COL6A3-211ENST00000491233 ST3GAL5Q9UNP4 418 aa15.43■□□□□ 0.06
COL6A3-211ENST00000491233 DENND3A2RUS2 1198 aa15.42■□□□□ 0.06
COL6A3-211ENST00000491233 GRXCR2A6NFK2 248 aa15.42■□□□□ 0.06
COL6A3-211ENST00000491233 CPLX1O14810 134 aa15.42■□□□□ 0.06
COL6A3-211ENST00000491233 ZNF862O60290 1169 aa15.42■□□□□ 0.06
COL6A3-211ENST00000491233 GAS7O60861 476 aa15.42■□□□□ 0.06
COL6A3-211ENST00000491233 DEXIO95424 95 aa15.42■□□□□ 0.06
COL6A3-211ENST00000491233 PRKCEQ02156 737 aa15.42■□□□□ 0.06
COL6A3-211ENST00000491233 STK3Q13188 491 aa15.42■□□□□ 0.06
COL6A3-211ENST00000491233 ODR4Q5SWX8 454 aa15.42■□□□□ 0.06
COL6A3-211ENST00000491233 LRCH2Q5VUJ6 765 aa15.42■□□□□ 0.06
COL6A3-211ENST00000491233 FAM228AQ86W67 206 aa15.42■□□□□ 0.06
COL6A3-211ENST00000491233 FAM178BQ8IXR5 827 aa15.42■□□□□ 0.06
COL6A3-211ENST00000491233 TBCKQ8TEA7 893 aa15.42■□□□□ 0.06
COL6A3-211ENST00000491233 SLC5A5Q92911 643 aa15.42■□□□□ 0.06
COL6A3-211ENST00000491233 GJA10Q969M2 543 aa15.42■□□□□ 0.06
COL6A3-211ENST00000491233 ADAM2Q99965 735 aa15.42■□□□□ 0.06
COL6A3-211ENST00000491233 TEKT3Q9BXF9 490 aa15.42■□□□□ 0.06
COL6A3-211ENST00000491233 TM6SF1Q9BZW5 370 aa15.42■□□□□ 0.06
COL6A3-211ENST00000491233 C1orf112Q9NSG2 853 aa15.42■□□□□ 0.06
COL6A3-211ENST00000491233 PCDHA4Q9UN74 947 aa15.42■□□□□ 0.06
COL6A3-211ENST00000491233 PLAGL2Q9UPG8 496 aa15.42■□□□□ 0.06
COL6A3-211ENST00000491233 GPR182O15218 404 aa15.41■□□□□ 0.06
COL6A3-211ENST00000491233 MAGEB2O15479 319 aa15.41■□□□□ 0.06
COL6A3-211ENST00000491233 TDP2O95551 362 aa15.41■□□□□ 0.06
COL6A3-211ENST00000491233 OATP04181 439 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms