RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 STBD1O95210 358 aa15.39■□□□□ 0.05
SMPD4-219ENST00000491128 TXNP10599 105 aaKnown RBP15.39■□□□□ 0.05
SMPD4-219ENST00000491128 TCF7P36402 384 aaPredicted RBP15.39■□□□□ 0.05
SMPD4-219ENST00000491128 MTIF2P46199 727 aaKnown RBP15.39■□□□□ 0.05
SMPD4-219ENST00000491128 GCLCP48506 637 aaPredicted RBP15.39■□□□□ 0.05
SMPD4-219ENST00000491128 FAM178BQ8IXR5 827 aa15.39■□□□□ 0.05
SMPD4-219ENST00000491128 CCDC155Q8N6L0 562 aa15.39■□□□□ 0.05
SMPD4-219ENST00000491128 NEK9Q8TD19 979 aa15.39■□□□□ 0.05
SMPD4-219ENST00000491128 PPP1R13LQ8WUF5 828 aa15.39■□□□□ 0.05
SMPD4-219ENST00000491128 MORF4L1Q9UBU8 362 aa15.39■□□□□ 0.05
SMPD4-219ENST00000491128 SLC45A1Q9Y2W3 748 aa15.39■□□□□ 0.05
SMPD4-219ENST00000491128 NFASCO94856 1347 aa15.38■□□□□ 0.05
SMPD4-219ENST00000491128 FAM155AB1AL88 458 aaPredicted RBP15.38■□□□□ 0.05
SMPD4-219ENST00000491128 UBXN1Q04323 297 aa15.38■□□□□ 0.05
SMPD4-219ENST00000491128 ZNF792Q3KQV3 632 aa15.38■□□□□ 0.05
SMPD4-219ENST00000491128 MIS18BP1Q6P0N0 1132 aa15.38■□□□□ 0.05
SMPD4-219ENST00000491128 SMAP1Q8IYB5 467 aaPredicted RBP15.38■□□□□ 0.05
SMPD4-219ENST00000491128 SHCBP1Q8NEM2 672 aa15.38■□□□□ 0.05
SMPD4-219ENST00000491128 NPLOC4Q8TAT6 608 aa15.38■□□□□ 0.05
SMPD4-219ENST00000491128 TUBGCP2Q9BSJ2 902 aa15.38■□□□□ 0.05
SMPD4-219ENST00000491128 ZNF302Q9NR11 478 aa15.38■□□□□ 0.05
SMPD4-219ENST00000491128 MAGEC2Q9UBF1 373 aaPredicted RBP15.38■□□□□ 0.05
SMPD4-219ENST00000491128 LIMA1Q9UHB6 759 aaKnown RBP15.38■□□□□ 0.05
SMPD4-219ENST00000491128 USP20Q9Y2K6 914 aa15.38■□□□□ 0.05
SMPD4-219ENST00000491128 ADCYAP1R1P41586 468 aa15.38■□□□□ 0.05
SMPD4-219ENST00000491128 PEX3P56589 373 aa15.38■□□□□ 0.05
SMPD4-219ENST00000491128 FAM110CQ1W6H9 321 aa15.38■□□□□ 0.05
SMPD4-219ENST00000491128 ZCWPW2Q504Y3 356 aa15.38■□□□□ 0.05
SMPD4-219ENST00000491128 LRRC55Q6ZSA7 311 aa15.38■□□□□ 0.05
SMPD4-219ENST00000491128 IFNL1Q8IU54 200 aa15.38■□□□□ 0.05
SMPD4-219ENST00000491128 SENP7Q9BQF6 1050 aa15.38■□□□□ 0.05
SMPD4-219ENST00000491128 MCM3APO60318 1980 aa15.38■□□□□ 0.05
SMPD4-219ENST00000491128 RNF225M0QZC1 329 aaPredicted RBP15.37■□□□□ 0.05
SMPD4-219ENST00000491128 HS1BP3Q53T59 392 aa15.37■□□□□ 0.05
SMPD4-219ENST00000491128 ATP6V0A1Q93050 837 aa15.37■□□□□ 0.05
SMPD4-219ENST00000491128 SPATA33Q96N06 139 aa15.37■□□□□ 0.05
SMPD4-219ENST00000491128 THAP9Q9H5L6 903 aa15.37■□□□□ 0.05
SMPD4-219ENST00000491128 K7ENM7 598 aa15.37■□□□□ 0.05
SMPD4-219ENST00000491128 SLC16A4O15374 487 aa15.37■□□□□ 0.05
SMPD4-219ENST00000491128 SLC10A3P09131 477 aa15.37■□□□□ 0.05
SMPD4-219ENST00000491128 COPB2P35606 906 aa15.37■□□□□ 0.05
SMPD4-219ENST00000491128 KNOP1Q1ED39 458 aaKnown RBP15.37■□□□□ 0.05
SMPD4-219ENST00000491128 SPECC1LQ69YQ0 1117 aa15.37■□□□□ 0.05
SMPD4-219ENST00000491128 EPM2AIP1Q7L775 607 aaPredicted RBP15.37■□□□□ 0.05
SMPD4-219ENST00000491128 ZNF720Q7Z2F6 126 aa15.37■□□□□ 0.05
SMPD4-219ENST00000491128 DHX37Q8IY37 1157 aaKnown RBP15.37■□□□□ 0.05
SMPD4-219ENST00000491128 NOC3LQ8WTT2 800 aaKnown RBP15.37■□□□□ 0.05
SMPD4-219ENST00000491128 DBR1Q9UK59 544 aaKnown RBP15.37■□□□□ 0.05
SMPD4-219ENST00000491128 TLL2Q9Y6L7 1015 aa15.37■□□□□ 0.05
SMPD4-219ENST00000491128 NOP56O00567 594 aaKnown RBP15.36■□□□□ 0.05
SMPD4-219ENST00000491128 AOC2O75106 756 aa15.36■□□□□ 0.05
SMPD4-219ENST00000491128 GUCY2CP25092 1073 aa15.36■□□□□ 0.05
SMPD4-219ENST00000491128 IRX5P78411 483 aaPredicted RBP15.36■□□□□ 0.05
SMPD4-219ENST00000491128 CRHR2Q13324 411 aa15.36■□□□□ 0.05
SMPD4-219ENST00000491128 ADAM9Q13443 819 aa15.36■□□□□ 0.05
SMPD4-219ENST00000491128 CCL14Q16627 93 aa15.36■□□□□ 0.05
SMPD4-219ENST00000491128 FILIP1LQ4L180 1135 aa15.36■□□□□ 0.05
SMPD4-219ENST00000491128 COBLL1Q53SF7 1204 aa15.36■□□□□ 0.05
SMPD4-219ENST00000491128 PLEKHH3Q7Z736 793 aa15.36■□□□□ 0.05
SMPD4-219ENST00000491128 BSNDQ8WZ55 320 aa15.36■□□□□ 0.05
SMPD4-219ENST00000491128 GLG1Q92896 1179 aa15.36■□□□□ 0.05
SMPD4-219ENST00000491128 TMEM143Q96AN5 459 aa15.36■□□□□ 0.05
SMPD4-219ENST00000491128 LENG1Q96BZ8 264 aaPredicted RBP15.36■□□□□ 0.05
SMPD4-219ENST00000491128 TSG101Q99816 390 aa15.36■□□□□ 0.05
SMPD4-219ENST00000491128 NOC4LQ9BVI4 516 aaKnown RBP15.36■□□□□ 0.05
SMPD4-219ENST00000491128 MANSC4A6NHS7 340 aaPredicted RBP15.36■□□□□ 0.05
SMPD4-219ENST00000491128 CCDC169A6NNP5 214 aa15.36■□□□□ 0.05
SMPD4-219ENST00000491128 LYPLA2O95372 231 aa15.36■□□□□ 0.05
SMPD4-219ENST00000491128 SNAI1O95863 264 aaPredicted RBP15.36■□□□□ 0.05
SMPD4-219ENST00000491128 TPM3P06753 285 aa15.36■□□□□ 0.05
SMPD4-219ENST00000491128 MUTP22033 750 aa15.36■□□□□ 0.05
SMPD4-219ENST00000491128 NR2F2P24468 414 aa15.36■□□□□ 0.05
SMPD4-219ENST00000491128 CASP4P49662 377 aa15.36■□□□□ 0.05
SMPD4-219ENST00000491128 RBL2Q08999 1139 aa15.36■□□□□ 0.05
SMPD4-219ENST00000491128 NEDD9Q14511 834 aa15.36■□□□□ 0.05
SMPD4-219ENST00000491128 METTL7BQ6UX53 244 aa15.36■□□□□ 0.05
SMPD4-219ENST00000491128 ZNF668Q96K58 619 aaPredicted RBP15.36■□□□□ 0.05
SMPD4-219ENST00000491128 ZHX1Q9UKY1 873 aaPredicted RBP15.36■□□□□ 0.05
SMPD4-219ENST00000491128 LRRC10BA6NIK2 292 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 TGFB1I1O43294 461 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 SKILP12757 684 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 STAT5BP51692 787 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 CHMP4BP1P59074 171 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 HTRA3P83110 453 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 MIIPQ5JXC2 388 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 CELF3Q5SZQ8 465 aaKnown RBP15.35■□□□□ 0.05
SMPD4-219ENST00000491128 TAPT1Q6NXT6 567 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 CCDC62Q6P9F0 684 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 RDH13Q8NBN7 331 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 ANKRD20A12PQ8NF67 263 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 GTF3C2Q8WUA4 911 aaPredicted RBP15.35■□□□□ 0.05
SMPD4-219ENST00000491128 TRAPPC12Q8WVT3 735 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 MAML3Q96JK9 1138 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 CTAGE1Q96RT6 745 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 CYP26B1Q9NR63 512 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.35■□□□□ 0.05
SMPD4-219ENST00000491128 FLRT1Q9NZU1 646 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 ATG7O95352 703 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 CYP2B6P20813 491 aa15.35■□□□□ 0.05
SMPD4-219ENST00000491128 CTGFP29279 349 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms