RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 ADCY7P51828 1080 aa17.11■□□□□ 0.33
FAM3D-204ENST00000489857 RBM10P98175 930 aaKnown RBP17.11■□□□□ 0.33
FAM3D-204ENST00000489857 CBX2Q14781 532 aaPredicted RBP17.11■□□□□ 0.33
FAM3D-204ENST00000489857 ABHD15Q6UXT9 468 aa17.11■□□□□ 0.33
FAM3D-204ENST00000489857 TRIM67Q6ZTA4 783 aa17.11■□□□□ 0.33
FAM3D-204ENST00000489857 CCDC60Q8IWA6 550 aaPredicted RBP17.11■□□□□ 0.33
FAM3D-204ENST00000489857 VN1R2Q8NFZ6 395 aa17.11■□□□□ 0.33
FAM3D-204ENST00000489857 ATP8B4Q8TF62 1192 aa17.11■□□□□ 0.33
FAM3D-204ENST00000489857 PCDHB7Q9Y5E2 793 aa17.11■□□□□ 0.33
FAM3D-204ENST00000489857 TBKBP1A7MCY6 615 aa17.1■□□□□ 0.33
FAM3D-204ENST00000489857 ZBTB42B2RXF5 422 aa17.1■□□□□ 0.33
FAM3D-204ENST00000489857 C9IYK1 514 aa17.1■□□□□ 0.33
FAM3D-204ENST00000489857 BACH1O14867 736 aa17.1■□□□□ 0.33
FAM3D-204ENST00000489857 PER2O15055 1255 aa17.1■□□□□ 0.33
FAM3D-204ENST00000489857 HBP1O60381 514 aa17.1■□□□□ 0.33
FAM3D-204ENST00000489857 RPS6KA5O75582 802 aa17.1■□□□□ 0.33
FAM3D-204ENST00000489857 CLK2P49760 499 aaKnown RBP17.1■□□□□ 0.33
FAM3D-204ENST00000489857 ERVFC1P60507 584 aa17.1■□□□□ 0.33
FAM3D-204ENST00000489857 FAM102BQ5T8I3 360 aa17.1■□□□□ 0.33
FAM3D-204ENST00000489857 BMP8AQ7Z5Y6 402 aa17.1■□□□□ 0.33
FAM3D-204ENST00000489857 TEX2Q8IWB9 1127 aa17.1■□□□□ 0.33
FAM3D-204ENST00000489857 ADAM2Q99965 735 aa17.1■□□□□ 0.33
FAM3D-204ENST00000489857 TLE6Q9H808 572 aa17.1■□□□□ 0.33
FAM3D-204ENST00000489857 RGS18Q9NS28 235 aa17.1■□□□□ 0.33
FAM3D-204ENST00000489857 BRPF3Q9ULD4 1205 aa17.1■□□□□ 0.33
FAM3D-204ENST00000489857 ST3GAL5Q9UNP4 418 aa17.1■□□□□ 0.33
FAM3D-204ENST00000489857 V9GY48 417 aaPredicted RBP17.1■□□□□ 0.33
FAM3D-204ENST00000489857 PLXNA4Q9HCM2 1894 aa17.1■□□□□ 0.33
FAM3D-204ENST00000489857 LOXHD1Q8IVV2 1947 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 TRIOO75962 3097 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 SMCO2A6NFE2 343 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 TMEM221A6NGB7 291 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 FAM86B1E9PN63 330 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 M0R296 226 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 DHX15O43143 795 aaKnown RBP17.09■□□□□ 0.33
FAM3D-204ENST00000489857 FGF18O76093 207 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 FAM86B2P0C5J1 330 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 ATP4AP20648 1035 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 IRX6P78412 446 aaPredicted RBP17.09■□□□□ 0.33
FAM3D-204ENST00000489857 UBE3AQ05086 875 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 AP3B2Q13367 1082 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 SPOUT1Q5T280 376 aaKnown RBP17.09■□□□□ 0.33
FAM3D-204ENST00000489857 FAM160B1Q5W0V3 765 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 SYNE3Q6ZMZ3 975 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 SLC24A5Q71RS6 500 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 NIPA1Q7RTP0 329 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 PRSS33Q8NF86 280 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 MICAL1Q8TDZ2 1067 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 TCEANC2Q96MN5 208 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 PPP1R16BQ96T49 567 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 PHF7Q9BWX1 381 aaPredicted RBP17.09■□□□□ 0.33
FAM3D-204ENST00000489857 ZNF302Q9NR11 478 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 TLR9Q9NR96 1032 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 C1orf112Q9NSG2 853 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 RBM28Q9NW13 759 aaKnown RBP17.09■□□□□ 0.33
FAM3D-204ENST00000489857 PCDHB12Q9Y5F1 795 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 COL1A2P08123 1366 aa17.09■□□□□ 0.33
FAM3D-204ENST00000489857 DENND3A2RUS2 1198 aa17.08■□□□□ 0.32
FAM3D-204ENST00000489857 ZNF76P36508 570 aa17.08■□□□□ 0.32
FAM3D-204ENST00000489857 ZXDAP98168 799 aa17.08■□□□□ 0.32
FAM3D-204ENST00000489857 EXOSC10Q01780 885 aaKnown RBP17.08■□□□□ 0.32
FAM3D-204ENST00000489857 RTN1Q16799 776 aa17.08■□□□□ 0.32
FAM3D-204ENST00000489857 DUSP6Q16828 381 aa17.08■□□□□ 0.32
FAM3D-204ENST00000489857 KIZQ2M2Z5 673 aa17.08■□□□□ 0.32
FAM3D-204ENST00000489857 ZNF484Q5JVG2 852 aa17.08■□□□□ 0.32
FAM3D-204ENST00000489857 PDXDC2PQ6P474 469 aa17.08■□□□□ 0.32
FAM3D-204ENST00000489857 FAM43BQ6ZT52 329 aaPredicted RBP17.08■□□□□ 0.32
FAM3D-204ENST00000489857 FAM228AQ86W67 206 aa17.08■□□□□ 0.32
FAM3D-204ENST00000489857 PLA2G4DQ86XP0 818 aa17.08■□□□□ 0.32
FAM3D-204ENST00000489857 COLGALT1Q8NBJ5 622 aa17.08■□□□□ 0.32
FAM3D-204ENST00000489857 SUSD6Q92537 303 aa17.08■□□□□ 0.32
FAM3D-204ENST00000489857 PHOX2BQ99453 314 aa17.08■□□□□ 0.32
FAM3D-204ENST00000489857 ANO2Q9NQ90 1003 aa17.08■□□□□ 0.32
FAM3D-204ENST00000489857 AAASQ9NRG9 546 aa17.08■□□□□ 0.32
FAM3D-204ENST00000489857 TYW1Q9NV66 732 aaKnown RBP17.08■□□□□ 0.32
FAM3D-204ENST00000489857 BARHL2Q9NY43 387 aa17.08■□□□□ 0.32
FAM3D-204ENST00000489857 IGLV3-22A0A075B6J6 115 aa17.07■□□□□ 0.32
FAM3D-204ENST00000489857 hCG_1984214I3L0E3 225 aa17.07■□□□□ 0.32
FAM3D-204ENST00000489857 FSCN2O14926 492 aa17.07■□□□□ 0.32
FAM3D-204ENST00000489857 GPR182O15218 404 aa17.07■□□□□ 0.32
FAM3D-204ENST00000489857 ZBTB43O43298 467 aa17.07■□□□□ 0.32
FAM3D-204ENST00000489857 C22orf31O95567 290 aa17.07■□□□□ 0.32
FAM3D-204ENST00000489857 FGFR1P11362 822 aa17.07■□□□□ 0.32
FAM3D-204ENST00000489857 FAM189BP81408 668 aa17.07■□□□□ 0.32
FAM3D-204ENST00000489857 DSC3Q14574 896 aa17.07■□□□□ 0.32
FAM3D-204ENST00000489857 IER5LQ5T953 404 aa17.07■□□□□ 0.32
FAM3D-204ENST00000489857 SWSAP1Q6NVH7 229 aa17.07■□□□□ 0.32
FAM3D-204ENST00000489857 THNSL1Q8IYQ7 743 aa17.07■□□□□ 0.32
FAM3D-204ENST00000489857 ZNF713Q8N859 430 aaPredicted RBP17.07■□□□□ 0.32
FAM3D-204ENST00000489857 CRYGNQ8WXF5 182 aa17.07■□□□□ 0.32
FAM3D-204ENST00000489857 PBXIP1Q96AQ6 731 aa17.07■□□□□ 0.32
FAM3D-204ENST00000489857 RPGRIP1Q96KN7 1286 aa17.07■□□□□ 0.32
FAM3D-204ENST00000489857 NEK1Q96PY6 1258 aa17.07■□□□□ 0.32
FAM3D-204ENST00000489857 OSMRQ99650 979 aa17.07■□□□□ 0.32
FAM3D-204ENST00000489857 CWH43Q9H720 699 aa17.07■□□□□ 0.32
FAM3D-204ENST00000489857 FAM217BQ9NTX9 383 aaPredicted RBP17.07■□□□□ 0.32
FAM3D-204ENST00000489857 WDFY4Q6ZS81 3184 aa17.06■□□□□ 0.32
FAM3D-204ENST00000489857 FNDC1Q4ZHG4 1894 aaPredicted RBP17.06■□□□□ 0.32
FAM3D-204ENST00000489857 ADAMTS3O15072 1205 aa17.06■□□□□ 0.32
FAM3D-204ENST00000489857 CRYBB1P53674 252 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms