RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 DOCK5Q9H7D0 1870 aa13.44□□□□□ -0.26
HDAC6-230ENST00000488543 DNAJC25-GNG10A0A024R161 153 aa13.44□□□□□ -0.26
HDAC6-230ENST00000488543 N4BP3O15049 544 aa13.44□□□□□ -0.26
HDAC6-230ENST00000488543 ZCWPW2Q504Y3 356 aa13.44□□□□□ -0.26
HDAC6-230ENST00000488543 RINT1Q6NUQ1 792 aa13.44□□□□□ -0.26
HDAC6-230ENST00000488543 FOXR2Q6PJQ5 311 aa13.44□□□□□ -0.26
HDAC6-230ENST00000488543 MYOCDQ8IZQ8 938 aa13.44□□□□□ -0.26
HDAC6-230ENST00000488543 TC2NQ8N9U0 490 aa13.44□□□□□ -0.26
HDAC6-230ENST00000488543 MAF1Q9H063 256 aa13.44□□□□□ -0.26
HDAC6-230ENST00000488543 TBC1D7Q9P0N9 293 aa13.44□□□□□ -0.26
HDAC6-230ENST00000488543 MORF4L1Q9UBU8 362 aa13.44□□□□□ -0.26
HDAC6-230ENST00000488543 RSPH10B2B2RC85 870 aa13.44□□□□□ -0.26
HDAC6-230ENST00000488543 KRT18P05783 430 aaKnown RBP13.44□□□□□ -0.26
HDAC6-230ENST00000488543 RSPH10BP0C881 870 aa13.44□□□□□ -0.26
HDAC6-230ENST00000488543 STXBP2Q15833 593 aa13.44□□□□□ -0.26
HDAC6-230ENST00000488543 HERC4Q5GLZ8 1057 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-230ENST00000488543 TRMT1LQ7Z2T5 733 aaKnown RBP13.44□□□□□ -0.26
HDAC6-230ENST00000488543 NEK9Q8TD19 979 aa13.44□□□□□ -0.26
HDAC6-230ENST00000488543 ITIH6Q6UXX5 1313 aa13.43□□□□□ -0.26
HDAC6-230ENST00000488543 LGALS16A8MUM7 142 aa13.43□□□□□ -0.26
HDAC6-230ENST00000488543 KIF2AO00139 706 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-230ENST00000488543 NKRFO15226 690 aaKnown RBP eCLIP13.43□□□□□ -0.26
HDAC6-230ENST00000488543 NRDCO43847 1150 aa13.43□□□□□ -0.26
HDAC6-230ENST00000488543 AOC2O75106 756 aa13.43□□□□□ -0.26
HDAC6-230ENST00000488543 ADORA2AP29274 412 aa13.43□□□□□ -0.26
HDAC6-230ENST00000488543 CCNA1P78396 465 aa13.43□□□□□ -0.26
HDAC6-230ENST00000488543 SP4Q02446 784 aa13.43□□□□□ -0.26
HDAC6-230ENST00000488543 LRRC55Q6ZSA7 311 aa13.43□□□□□ -0.26
HDAC6-230ENST00000488543 C1orf186Q6ZWK4 172 aa13.43□□□□□ -0.26
HDAC6-230ENST00000488543 MIER3Q7Z3K6 550 aa13.43□□□□□ -0.26
HDAC6-230ENST00000488543 BANK1Q8NDB2 785 aa13.43□□□□□ -0.26
HDAC6-230ENST00000488543 ANKRD20A12PQ8NF67 263 aa13.43□□□□□ -0.26
HDAC6-230ENST00000488543 ZNF507Q8TCN5 953 aa13.43□□□□□ -0.26
HDAC6-230ENST00000488543 SCFD1Q8WVM8 642 aa13.43□□□□□ -0.26
HDAC6-230ENST00000488543 CCDC102AQ96A19 550 aa13.43□□□□□ -0.26
HDAC6-230ENST00000488543 EEF2KMTQ96G04 330 aa13.43□□□□□ -0.26
HDAC6-230ENST00000488543 CNOT6LQ96LI5 555 aaKnown RBP13.43□□□□□ -0.26
HDAC6-230ENST00000488543 IWS1Q96ST2 819 aa13.43□□□□□ -0.26
HDAC6-230ENST00000488543 BAG1Q99933 345 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-230ENST00000488543 LXNQ9BS40 222 aa13.43□□□□□ -0.26
HDAC6-230ENST00000488543 LRRC37A2A6NM11 1700 aa13.43□□□□□ -0.26
HDAC6-230ENST00000488543 EIF3JO75822 258 aaKnown RBP13.42□□□□□ -0.26
HDAC6-230ENST00000488543 CCNE2O96020 404 aa13.42□□□□□ -0.26
HDAC6-230ENST00000488543 GNG11P61952 73 aa13.42□□□□□ -0.26
HDAC6-230ENST00000488543 HTRA3P83110 453 aa13.42□□□□□ -0.26
HDAC6-230ENST00000488543 LRRC63Q05C16 580 aa13.42□□□□□ -0.26
HDAC6-230ENST00000488543 FAM110CQ1W6H9 321 aa13.42□□□□□ -0.26
HDAC6-230ENST00000488543 EPM2AIP1Q7L775 607 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-230ENST00000488543 GPR142Q7Z601 462 aa13.42□□□□□ -0.26
HDAC6-230ENST00000488543 SFR1Q86XK3 245 aa13.42□□□□□ -0.26
HDAC6-230ENST00000488543 KRT222Q8N1A0 295 aa13.42□□□□□ -0.26
HDAC6-230ENST00000488543 SHCBP1Q8NEM2 672 aa13.42□□□□□ -0.26
HDAC6-230ENST00000488543 GTF3C2Q8WUA4 911 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-230ENST00000488543 NACC1Q96RE7 527 aa13.42□□□□□ -0.26
HDAC6-230ENST00000488543 ZSWIM4Q9H7M6 989 aa13.42□□□□□ -0.26
HDAC6-230ENST00000488543 POLD4Q9HCU8 107 aa13.42□□□□□ -0.26
HDAC6-230ENST00000488543 TBC1D22BQ9NU19 505 aa13.42□□□□□ -0.26
HDAC6-230ENST00000488543 SAMM50Q9Y512 469 aa13.42□□□□□ -0.26
HDAC6-230ENST00000488543 BRCA2P51587 3418 aa13.42□□□□□ -0.26
HDAC6-230ENST00000488543 SOWAHDA6NJG2 315 aa13.42□□□□□ -0.26
HDAC6-230ENST00000488543 TFRCP02786 760 aaKnown RBP13.42□□□□□ -0.26
HDAC6-230ENST00000488543 H2AFXP16104 143 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-230ENST00000488543 CASP5P51878 434 aa13.42□□□□□ -0.26
HDAC6-230ENST00000488543 TMEM63BQ5T3F8 832 aa13.42□□□□□ -0.26
HDAC6-230ENST00000488543 CREBRFQ8IUR6 639 aa13.42□□□□□ -0.26
HDAC6-230ENST00000488543 GPRASP2Q96D09 838 aa13.42□□□□□ -0.26
HDAC6-230ENST00000488543 KCTD10Q9H3F6 313 aa13.42□□□□□ -0.26
HDAC6-230ENST00000488543 MRPL44Q9H9J2 332 aaKnown RBP13.42□□□□□ -0.26
HDAC6-230ENST00000488543 MAGEC2Q9UBF1 373 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-230ENST00000488543 ZNFX1Q9P2E3 1918 aaKnown RBP13.42□□□□□ -0.26
HDAC6-230ENST00000488543 MYH11P35749 1972 aa13.42□□□□□ -0.26
HDAC6-230ENST00000488543 KCNA2P16389 499 aa13.41□□□□□ -0.26
HDAC6-230ENST00000488543 EDNRBP24530 442 aa13.41□□□□□ -0.26
HDAC6-230ENST00000488543 COPB2P35606 906 aa13.41□□□□□ -0.26
HDAC6-230ENST00000488543 NLRX1Q86UT6 975 aa13.41□□□□□ -0.26
HDAC6-230ENST00000488543 FAM114A1Q8IWE2 563 aa13.41□□□□□ -0.26
HDAC6-230ENST00000488543 MNS1Q8NEH6 495 aa13.41□□□□□ -0.26
HDAC6-230ENST00000488543 ERICH4A6NGS2 130 aa13.41□□□□□ -0.26
HDAC6-230ENST00000488543 SPATA31C2B4DYI2 1134 aa13.41□□□□□ -0.26
HDAC6-230ENST00000488543 P4HBP07237 508 aaKnown RBP13.41□□□□□ -0.26
HDAC6-230ENST00000488543 HOXD13P35453 343 aa13.41□□□□□ -0.26
HDAC6-230ENST00000488543 KCNJ6P48051 423 aa13.41□□□□□ -0.26
HDAC6-230ENST00000488543 RBL2Q08999 1139 aa13.41□□□□□ -0.26
HDAC6-230ENST00000488543 CRHR2Q13324 411 aa13.41□□□□□ -0.26
HDAC6-230ENST00000488543 MIIPQ5JXC2 388 aa13.41□□□□□ -0.26
HDAC6-230ENST00000488543 TUBGCP2Q9BSJ2 902 aa13.41□□□□□ -0.26
HDAC6-230ENST00000488543 ZHX3Q9H4I2 956 aa13.41□□□□□ -0.26
HDAC6-230ENST00000488543 FHOD1Q9Y613 1164 aa13.41□□□□□ -0.26
HDAC6-230ENST00000488543 DOCK3Q8IZD9 2030 aa13.41□□□□□ -0.26
HDAC6-230ENST00000488543 TLR2O60603 784 aa13.4□□□□□ -0.26
HDAC6-230ENST00000488543 GYPCP04921 128 aa13.4□□□□□ -0.26
HDAC6-230ENST00000488543 INHBEP58166 350 aa13.4□□□□□ -0.26
HDAC6-230ENST00000488543 UBXN1Q04323 297 aa13.4□□□□□ -0.26
HDAC6-230ENST00000488543 NELFCDQ8IXH7 590 aa13.4□□□□□ -0.26
HDAC6-230ENST00000488543 ZC3H3Q8IXZ2 948 aaKnown RBP13.4□□□□□ -0.26
HDAC6-230ENST00000488543 SH2D3AQ9BRG2 576 aa13.4□□□□□ -0.26
HDAC6-230ENST00000488543 LZTFL1Q9NQ48 299 aa13.4□□□□□ -0.26
HDAC6-230ENST00000488543 IVNS1ABPQ9Y6Y0 642 aa13.4□□□□□ -0.26
HDAC6-230ENST00000488543 PHLPP2Q6ZVD8 1323 aa13.4□□□□□ -0.26
HDAC6-230ENST00000488543 ADGRA2Q96PE1 1338 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms