RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 MAFO75444 373 aaPredicted RBP7.43□□□□□ -1.22
USP48-209ENST00000487880 CYP7B1O75881 506 aa7.43□□□□□ -1.22
USP48-209ENST00000487880 KNG1P01042 644 aa7.43□□□□□ -1.22
USP48-209ENST00000487880 IBSPP21815 317 aaPredicted RBP7.43□□□□□ -1.22
USP48-209ENST00000487880 LSP1P33241 339 aa7.43□□□□□ -1.22
USP48-209ENST00000487880 ECE1P42892 770 aa7.43□□□□□ -1.22
USP48-209ENST00000487880 GLRBP48167 497 aa7.43□□□□□ -1.22
USP48-209ENST00000487880 AFF3P51826 1226 aaKnown RBP7.43□□□□□ -1.22
USP48-209ENST00000487880 MLLT6P55198 1093 aaPredicted RBP7.43□□□□□ -1.22
USP48-209ENST00000487880 SESN3P58005 492 aa7.43□□□□□ -1.22
USP48-209ENST00000487880 TMPRSS15P98073 1019 aa7.43□□□□□ -1.22
USP48-209ENST00000487880 KANK2Q63ZY3 851 aa7.43□□□□□ -1.22
USP48-209ENST00000487880 LRSAM1Q6UWE0 723 aa7.43□□□□□ -1.22
USP48-209ENST00000487880 NECAB2Q7Z6G3 386 aa7.43□□□□□ -1.22
USP48-209ENST00000487880 STPG3Q8N7X2 389 aa7.43□□□□□ -1.22
USP48-209ENST00000487880 CLRN3Q8NCR9 226 aa7.43□□□□□ -1.22
USP48-209ENST00000487880 ZCCHC14Q8WYQ9 949 aaKnown RBP7.43□□□□□ -1.22
USP48-209ENST00000487880 RTF1Q92541 710 aaKnown RBP7.43□□□□□ -1.22
USP48-209ENST00000487880 ERCC4Q92889 916 aaPredicted RBP7.43□□□□□ -1.22
USP48-209ENST00000487880 MS4A5Q9H3V2 200 aa7.43□□□□□ -1.22
USP48-209ENST00000487880 USP36Q9P275 1121 aaKnown RBP7.43□□□□□ -1.22
USP48-209ENST00000487880 UBA6A0AVT1 1052 aaPredicted RBP7.42□□□□□ -1.22
USP48-209ENST00000487880 IL13RA1P78552 427 aa7.42□□□□□ -1.22
USP48-209ENST00000487880 TTC38Q5R3I4 469 aa7.42□□□□□ -1.22
USP48-209ENST00000487880 RASSF3Q86WH2 238 aa7.42□□□□□ -1.22
USP48-209ENST00000487880 TMEM151BQ8IW70 566 aa7.42□□□□□ -1.22
USP48-209ENST00000487880 LINC01356Q8N9X3 169 aa7.42□□□□□ -1.22
USP48-209ENST00000487880 TP53I13Q8NBR0 393 aaPredicted RBP7.42□□□□□ -1.22
USP48-209ENST00000487880 ZNF496Q96IT1 587 aaPredicted RBP7.42□□□□□ -1.22
USP48-209ENST00000487880 MAML3Q96JK9 1138 aa7.42□□□□□ -1.22
USP48-209ENST00000487880 TACO1Q9BSH4 297 aaKnown RBP7.42□□□□□ -1.22
USP48-209ENST00000487880 OR10A5Q9H207 317 aa7.42□□□□□ -1.22
USP48-209ENST00000487880 NTMQ9P121 344 aa7.42□□□□□ -1.22
USP48-209ENST00000487880 CROTQ9UKG9 612 aa7.42□□□□□ -1.22
USP48-209ENST00000487880 hCG_2014768A0A024R1R8 64 aa7.41□□□□□ -1.22
USP48-209ENST00000487880 NUAK1O60285 661 aa7.41□□□□□ -1.22
USP48-209ENST00000487880 FBXO21O94952 628 aa7.41□□□□□ -1.22
USP48-209ENST00000487880 SLC6A3Q01959 620 aa7.41□□□□□ -1.22
USP48-209ENST00000487880 MOGSQ13724 837 aa7.41□□□□□ -1.22
USP48-209ENST00000487880 MYBPC3Q14896 1274 aa7.41□□□□□ -1.22
USP48-209ENST00000487880 CIAPIN1Q6FI81 312 aa7.41□□□□□ -1.22
USP48-209ENST00000487880 CXXC5Q7LFL8 322 aaKnown RBP7.41□□□□□ -1.22
USP48-209ENST00000487880 KANSL1Q7Z3B3 1105 aa7.41□□□□□ -1.22
USP48-209ENST00000487880 C1QL4Q86Z23 238 aa7.41□□□□□ -1.22
USP48-209ENST00000487880 PHYKPLQ8IUZ5 450 aa7.41□□□□□ -1.22
USP48-209ENST00000487880 CALML6Q8TD86 181 aa7.41□□□□□ -1.22
USP48-209ENST00000487880 ZDHHC5Q9C0B5 715 aa7.41□□□□□ -1.22
USP48-209ENST00000487880 IRF2BPLQ9H1B7 796 aa7.41□□□□□ -1.22
USP48-209ENST00000487880 SEMA4AQ9H3S1 761 aa7.41□□□□□ -1.22
USP48-209ENST00000487880 K7ESF4 209 aa7.4□□□□□ -1.22
USP48-209ENST00000487880 IL13P35225 146 aa7.4□□□□□ -1.22
USP48-209ENST00000487880 ROM1Q03395 351 aa7.4□□□□□ -1.22
USP48-209ENST00000487880 SLFN12LQ6IEE8 588 aa7.4□□□□□ -1.22
USP48-209ENST00000487880 DPP8Q6V1X1 898 aaPredicted RBP7.4□□□□□ -1.22
USP48-209ENST00000487880 TTLL7Q6ZT98 887 aa7.4□□□□□ -1.22
USP48-209ENST00000487880 FRMD7Q6ZUT3 714 aa7.4□□□□□ -1.22
USP48-209ENST00000487880 HDGFL2Q7Z4V5 671 aaPredicted RBP7.4□□□□□ -1.22
USP48-209ENST00000487880 C7orf31Q8N865 590 aa7.4□□□□□ -1.22
USP48-209ENST00000487880 COG1Q8WTW3 980 aa7.4□□□□□ -1.22
USP48-209ENST00000487880 POFUT1Q9H488 388 aa7.4□□□□□ -1.22
USP48-209ENST00000487880 SLC5A4Q9NY91 659 aa7.4□□□□□ -1.22
USP48-209ENST00000487880 MSRAQ9UJ68 235 aa7.4□□□□□ -1.22
USP48-209ENST00000487880 ARID1BQ8NFD5 2236 aaPredicted RBP7.39□□□□□ -1.23
USP48-209ENST00000487880 LCHNA4D1U4 455 aa7.39□□□□□ -1.23
USP48-209ENST00000487880 DBX1A6NMT0 343 aa7.39□□□□□ -1.23
USP48-209ENST00000487880 ALG1L2C9J202 215 aa7.39□□□□□ -1.23
USP48-209ENST00000487880 PRKD3O94806 890 aa7.39□□□□□ -1.23
USP48-209ENST00000487880 KLHL18O94889 574 aa7.39□□□□□ -1.23
USP48-209ENST00000487880 CFPP27918 469 aa7.39□□□□□ -1.23
USP48-209ENST00000487880 RGS3P49796 1198 aa7.39□□□□□ -1.23
USP48-209ENST00000487880 TCERG1LQ5VWI1 586 aa7.39□□□□□ -1.23
USP48-209ENST00000487880 LRRC56Q8IYG6 542 aaPredicted RBP7.39□□□□□ -1.23
USP48-209ENST00000487880 ADGRG2Q8IZP9 1017 aa7.39□□□□□ -1.23
USP48-209ENST00000487880 CARFQ8N187 725 aa7.39□□□□□ -1.23
USP48-209ENST00000487880 YTHDC1Q96MU7 727 aaKnown RBP7.39□□□□□ -1.23
USP48-209ENST00000487880 TOX2Q96NM4 488 aa7.39□□□□□ -1.23
USP48-209ENST00000487880 TUBGCP5Q96RT8 1024 aa7.39□□□□□ -1.23
USP48-209ENST00000487880 PUS7LQ9H0K6 701 aaKnown RBP7.39□□□□□ -1.23
USP48-209ENST00000487880 VTA1Q9NP79 307 aa7.39□□□□□ -1.23
USP48-209ENST00000487880 TOPORSQ9NS56 1045 aaPredicted RBP7.39□□□□□ -1.23
USP48-209ENST00000487880 A0A1B0GTL3 188 aa7.38□□□□□ -1.23
USP48-209ENST00000487880 ELL2O00472 640 aaPredicted RBP7.38□□□□□ -1.23
USP48-209ENST00000487880 DDX3XO00571 662 aaKnown RBP eCLIP7.38□□□□□ -1.23
USP48-209ENST00000487880 KDM1AO60341 852 aa7.38□□□□□ -1.23
USP48-209ENST00000487880 APEX1P27695 318 aaKnown RBP7.38□□□□□ -1.23
USP48-209ENST00000487880 SARSP49591 514 aaKnown RBP7.38□□□□□ -1.23
USP48-209ENST00000487880 ERVK-21P61565 698 aa7.38□□□□□ -1.23
USP48-209ENST00000487880 FAPQ12884 760 aa7.38□□□□□ -1.23
USP48-209ENST00000487880 IQSEC1Q6DN90 963 aa7.38□□□□□ -1.23
USP48-209ENST00000487880 TRMT10BQ6PF06 316 aaKnown RBP7.38□□□□□ -1.23
USP48-209ENST00000487880 MYL10Q9BUA6 226 aa7.38□□□□□ -1.23
USP48-209ENST00000487880 TRIM8Q9BZR9 551 aa7.38□□□□□ -1.23
USP48-209ENST00000487880 H0Y858 1186 aa7.37□□□□□ -1.23
USP48-209ENST00000487880 PRPF6O94906 941 aaKnown RBP7.37□□□□□ -1.23
USP48-209ENST00000487880 GUCY2FP51841 1108 aa7.37□□□□□ -1.23
USP48-209ENST00000487880 EVA1CP58658 441 aa7.37□□□□□ -1.23
USP48-209ENST00000487880 ANAPC15P60006 121 aa7.37□□□□□ -1.23
USP48-209ENST00000487880 IGBP1P78318 339 aa7.37□□□□□ -1.23
USP48-209ENST00000487880 CD83Q01151 205 aa7.37□□□□□ -1.23
USP48-209ENST00000487880 FZD5Q13467 585 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms