RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 USP36Q9P275 1121 aaKnown RBP7.58□□□□□ -1.2
CUL3-211ENST00000487558 GABBR1Q9UBS5 961 aa7.58□□□□□ -1.2
CUL3-211ENST00000487558 PALD1Q9ULE6 856 aa7.58□□□□□ -1.2
CUL3-211ENST00000487558 ANKRD6Q9Y2G4 727 aa7.58□□□□□ -1.2
CUL3-211ENST00000487558 CCDC194A0A1B0GVG4 234 aa7.57□□□□□ -1.2
CUL3-211ENST00000487558 TRIM75PA6NK02 468 aa7.57□□□□□ -1.2
CUL3-211ENST00000487558 FAM90A27PA6NNH2 459 aa7.57□□□□□ -1.2
CUL3-211ENST00000487558 FOXP2O15409 715 aa7.57□□□□□ -1.2
CUL3-211ENST00000487558 KDM1AO60341 852 aa7.57□□□□□ -1.2
CUL3-211ENST00000487558 C4BPAP04003 597 aaKnown RBP7.57□□□□□ -1.2
CUL3-211ENST00000487558 CYBBP04839 570 aa7.57□□□□□ -1.2
CUL3-211ENST00000487558 PCBP2Q15366 365 aaKnown RBP eCLIP7.57□□□□□ -1.2
CUL3-211ENST00000487558 NXNQ6DKJ4 435 aa7.57□□□□□ -1.2
CUL3-211ENST00000487558 PAQR3Q6TCH7 311 aa7.57□□□□□ -1.2
CUL3-211ENST00000487558 LMBR1Q8WVP7 490 aa7.57□□□□□ -1.2
CUL3-211ENST00000487558 CLEC4DQ8WXI8 215 aa7.57□□□□□ -1.2
CUL3-211ENST00000487558 C16orf92Q96LL3 132 aa7.57□□□□□ -1.2
CUL3-211ENST00000487558 ACAP3Q96P50 834 aa7.57□□□□□ -1.2
CUL3-211ENST00000487558 RHOBTB2Q9BYZ6 727 aa7.57□□□□□ -1.2
CUL3-211ENST00000487558 DBR1Q9UK59 544 aaKnown RBP7.57□□□□□ -1.2
CUL3-211ENST00000487558 CNOT6Q9ULM6 557 aaKnown RBP7.57□□□□□ -1.2
CUL3-211ENST00000487558 TELO2Q9Y4R8 837 aa7.57□□□□□ -1.2
CUL3-211ENST00000487558 TCRBV5S2A0A599 114 aa7.56□□□□□ -1.2
CUL3-211ENST00000487558 PRAMEF25A6NGN4 478 aa7.56□□□□□ -1.2
CUL3-211ENST00000487558 CAND2O75155 1236 aa7.56□□□□□ -1.2
CUL3-211ENST00000487558 LTFP02788 710 aa7.56□□□□□ -1.2
CUL3-211ENST00000487558 DBHP09172 617 aa7.56□□□□□ -1.2
CUL3-211ENST00000487558 GALK1P51570 392 aa7.56□□□□□ -1.2
CUL3-211ENST00000487558 HERVK_113P62684 666 aa7.56□□□□□ -1.2
CUL3-211ENST00000487558 HLTFQ14527 1009 aaKnown RBP eCLIP7.56□□□□□ -1.2
CUL3-211ENST00000487558 TMEM132EQ6IEE7 984 aa7.56□□□□□ -1.2
CUL3-211ENST00000487558 CXorf57Q6NSI4 855 aaKnown RBP7.56□□□□□ -1.2
CUL3-211ENST00000487558 ESRP1Q6NXG1 681 aaKnown RBP7.56□□□□□ -1.2
CUL3-211ENST00000487558 C14orf80Q86SX3 495 aa7.56□□□□□ -1.2
CUL3-211ENST00000487558 SIRT2Q8IXJ6 389 aa7.56□□□□□ -1.2
CUL3-211ENST00000487558 CCDC146Q8IYE0 955 aa7.56□□□□□ -1.2
CUL3-211ENST00000487558 KCNC2Q96PR1 638 aa7.56□□□□□ -1.2
CUL3-211ENST00000487558 MSRAQ9UJ68 235 aa7.56□□□□□ -1.2
CUL3-211ENST00000487558 NOB1Q9ULX3 412 aaKnown RBP7.56□□□□□ -1.2
CUL3-211ENST00000487558 GIT1Q9Y2X7 761 aa7.56□□□□□ -1.2
CUL3-211ENST00000487558 SIT1Q9Y3P8 196 aa7.56□□□□□ -1.2
CUL3-211ENST00000487558 KCTD3Q9Y597 815 aa7.56□□□□□ -1.2
CUL3-211ENST00000487558 ZC3H12DA2A288 527 aaKnown RBP7.55□□□□□ -1.2
CUL3-211ENST00000487558 KLHL33A6NCF5 533 aa7.55□□□□□ -1.2
CUL3-211ENST00000487558 F8W031 263 aaPredicted RBP7.55□□□□□ -1.2
CUL3-211ENST00000487558 FZD9O00144 591 aa7.55□□□□□ -1.2
CUL3-211ENST00000487558 BMP7P18075 431 aa7.55□□□□□ -1.2
CUL3-211ENST00000487558 VCAM1P19320 739 aa7.55□□□□□ -1.2
CUL3-211ENST00000487558 GPR3P46089 330 aa7.55□□□□□ -1.2
CUL3-211ENST00000487558 SLC9A5Q14940 896 aa7.55□□□□□ -1.2
CUL3-211ENST00000487558 NR1I3Q14994 352 aa7.55□□□□□ -1.2
CUL3-211ENST00000487558 MLC1Q15049 377 aa7.55□□□□□ -1.2
CUL3-211ENST00000487558 CLUL1Q15846 466 aa7.55□□□□□ -1.2
CUL3-211ENST00000487558 TMEM240Q5SV17 173 aa7.55□□□□□ -1.2
CUL3-211ENST00000487558 CATSPEREQ5SY80 951 aa7.55□□□□□ -1.2
CUL3-211ENST00000487558 CCSAPQ6IQ19 270 aaPredicted RBP7.55□□□□□ -1.2
CUL3-211ENST00000487558 TTLL7Q6ZT98 887 aa7.55□□□□□ -1.2
CUL3-211ENST00000487558 CMIPQ8IY22 773 aa7.55□□□□□ -1.2
CUL3-211ENST00000487558 CPA6Q8N4T0 437 aa7.55□□□□□ -1.2
CUL3-211ENST00000487558 TTLL11Q8NHH1 800 aa7.55□□□□□ -1.2
CUL3-211ENST00000487558 TTC8Q8TAM2 541 aa7.55□□□□□ -1.2
CUL3-211ENST00000487558 RTF1Q92541 710 aaKnown RBP7.55□□□□□ -1.2
CUL3-211ENST00000487558 E2F7Q96AV8 911 aa7.55□□□□□ -1.2
CUL3-211ENST00000487558 TNFRSF12AQ9NP84 129 aa7.55□□□□□ -1.2
CUL3-211ENST00000487558 PNMA8BQ9ULN7 279 aaPredicted RBP7.55□□□□□ -1.2
CUL3-211ENST00000487558 MPOP05164 745 aa7.54□□□□□ -1.2
CUL3-211ENST00000487558 GRIN1Q05586 938 aa7.54□□□□□ -1.2
CUL3-211ENST00000487558 PDCD1Q15116 288 aa7.54□□□□□ -1.2
CUL3-211ENST00000487558 GFOD2Q3B7J2 385 aa7.54□□□□□ -1.2
CUL3-211ENST00000487558 ZNF385BQ569K4 471 aa7.54□□□□□ -1.2
CUL3-211ENST00000487558 TIGD7Q6NT04 549 aaPredicted RBP7.54□□□□□ -1.2
CUL3-211ENST00000487558 PHYKPLQ8IUZ5 450 aa7.54□□□□□ -1.2
CUL3-211ENST00000487558 MAGEB6Q8N7X4 407 aa7.54□□□□□ -1.2
CUL3-211ENST00000487558 ZNF496Q96IT1 587 aaPredicted RBP7.54□□□□□ -1.2
CUL3-211ENST00000487558 MS4A5Q9H3V2 200 aa7.54□□□□□ -1.2
CUL3-211ENST00000487558 ZCCHC4Q9H5U6 513 aa7.54□□□□□ -1.2
CUL3-211ENST00000487558 RXFP1Q9HBX9 757 aa7.54□□□□□ -1.2
CUL3-211ENST00000487558 SLC52A1Q9NWF4 448 aa7.54□□□□□ -1.2
CUL3-211ENST00000487558 A0A0G2JLL6 359 aaPredicted RBP7.53□□□□□ -1.2
CUL3-211ENST00000487558 OR14I1A6ND48 311 aa7.53□□□□□ -1.2
CUL3-211ENST00000487558 HRKO00198 91 aa7.53□□□□□ -1.2
CUL3-211ENST00000487558 XPOTO43592 962 aaKnown RBP7.53□□□□□ -1.2
CUL3-211ENST00000487558 MAP4K4O95819 1239 aaPredicted RBP7.53□□□□□ -1.2
CUL3-211ENST00000487558 GNALP38405 381 aa7.53□□□□□ -1.2
CUL3-211ENST00000487558 ERVFRD-1P60508 538 aa7.53□□□□□ -1.2
CUL3-211ENST00000487558 SSPNQ14714 243 aa7.53□□□□□ -1.2
CUL3-211ENST00000487558 PAN2Q504Q3 1202 aaKnown RBP7.53□□□□□ -1.2
CUL3-211ENST00000487558 EFCAB2Q5VUJ9 269 aa7.53□□□□□ -1.2
CUL3-211ENST00000487558 TCERG1LQ5VWI1 586 aa7.53□□□□□ -1.2
CUL3-211ENST00000487558 ESPNLQ6ZVH7 1005 aa7.53□□□□□ -1.2
CUL3-211ENST00000487558 C7orf31Q8N865 590 aa7.53□□□□□ -1.2
CUL3-211ENST00000487558 MARCH10Q8NA82 808 aaPredicted RBP7.53□□□□□ -1.2
CUL3-211ENST00000487558 ARRDC4Q8NCT1 418 aa7.53□□□□□ -1.2
CUL3-211ENST00000487558 GBP4Q96PP9 640 aa7.53□□□□□ -1.2
CUL3-211ENST00000487558 ASB1Q9Y576 335 aa7.53□□□□□ -1.2
CUL3-211ENST00000487558 ARID4BQ4LE39 1312 aaPredicted RBP7.52□□□□□ -1.2
CUL3-211ENST00000487558 LCHNA4D1U4 455 aa7.52□□□□□ -1.21
CUL3-211ENST00000487558 ACOT7O00154 380 aa7.52□□□□□ -1.21
CUL3-211ENST00000487558 H2AFYO75367 372 aaKnown RBP7.52□□□□□ -1.21
CUL3-211ENST00000487558 KRT18P05783 430 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms