RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 MYO1BO43795 1136 aa5.84□□□□□ -1.47
SNRNP40-205ENST00000486941 EPHB4P54760 987 aa5.84□□□□□ -1.47
SNRNP40-205ENST00000486941 R3HDM1Q15032 1099 aaKnown RBP5.84□□□□□ -1.47
SNRNP40-205ENST00000486941 GLB1LQ6UWU2 654 aa5.84□□□□□ -1.47
SNRNP40-205ENST00000486941 CELF2-AS1Q8N7Q2 184 aa5.84□□□□□ -1.47
SNRNP40-205ENST00000486941 PIP4K2CQ8TBX8 421 aa5.84□□□□□ -1.47
SNRNP40-205ENST00000486941 SH3RF3Q8TEJ3 882 aaPredicted RBP5.84□□□□□ -1.47
SNRNP40-205ENST00000486941 CHAMP1Q96JM3 812 aa5.84□□□□□ -1.47
SNRNP40-205ENST00000486941 TMEM168Q9H0V1 697 aa5.84□□□□□ -1.47
SNRNP40-205ENST00000486941 MEGF9Q9H1U4 602 aa5.84□□□□□ -1.47
SNRNP40-205ENST00000486941 ZNF408Q9H9D4 720 aa5.84□□□□□ -1.47
SNRNP40-205ENST00000486941 NGRNQ9NPE2 291 aaKnown RBP5.84□□□□□ -1.47
SNRNP40-205ENST00000486941 HSPBP1Q9NZL4 362 aa5.84□□□□□ -1.47
SNRNP40-205ENST00000486941 MYOTQ9UBF9 498 aa5.84□□□□□ -1.47
SNRNP40-205ENST00000486941 ASH2LQ9UBL3 628 aa5.84□□□□□ -1.47
SNRNP40-205ENST00000486941 COA3Q9Y2R0 106 aaPredicted RBP5.84□□□□□ -1.47
SNRNP40-205ENST00000486941 CDC42BPGQ6DT37 1551 aa5.84□□□□□ -1.48
SNRNP40-205ENST00000486941 MYOM2P54296 1465 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 BCL9LQ86UU0 1499 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 TECPR2O15040 1411 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 ATRNO75882 1429 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 ABCC11Q96J66 1382 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 ANKRD30BQ9BXX2 1392 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 ADGRF5Q8IZF2 1346 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 SLC27A2O14975 620 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 KLHL18O94889 574 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 LTFP02788 710 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 SLPIP03973 132 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 CYP1A1P04798 512 aaPredicted RBP5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 PPP2CBP62714 309 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 PPP2CAP67775 309 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 GRIN1Q05586 938 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 FAM124AQ86V42 546 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 KBTBD2Q8IY47 623 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 CLIC6Q96NY7 704 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 YIPF4Q9BSR8 244 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 SMOC1Q9H4F8 434 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 EPB41L1Q9H4G0 881 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 L2HGDHQ9H9P8 463 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 TSC22D4Q9Y3Q8 395 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 PXDNQ92626 1479 aa5.83□□□□□ -1.48
SNRNP40-205ENST00000486941 CCDC144AA2RUR9 1427 aa5.82□□□□□ -1.48
SNRNP40-205ENST00000486941 SPATA31E1Q6ZUB1 1445 aa5.82□□□□□ -1.48
SNRNP40-205ENST00000486941 IFT172Q9UG01 1749 aa5.82□□□□□ -1.48
SNRNP40-205ENST00000486941 B4GALT4O60513 344 aa5.82□□□□□ -1.48
SNRNP40-205ENST00000486941 FGRP09769 529 aa5.82□□□□□ -1.48
SNRNP40-205ENST00000486941 NTRK3Q16288 839 aa5.82□□□□□ -1.48
SNRNP40-205ENST00000486941 CRIP3Q6Q6R5 217 aa5.82□□□□□ -1.48
SNRNP40-205ENST00000486941 KCNT2Q6UVM3 1135 aa5.82□□□□□ -1.48
SNRNP40-205ENST00000486941 DTX3Q8N9I9 347 aa5.82□□□□□ -1.48
SNRNP40-205ENST00000486941 CHST13Q8NET6 341 aa5.82□□□□□ -1.48
SNRNP40-205ENST00000486941 IER2Q9BTL4 223 aa5.82□□□□□ -1.48
SNRNP40-205ENST00000486941 KLC2Q9H0B6 622 aa5.82□□□□□ -1.48
SNRNP40-205ENST00000486941 SLC6A20Q9NP91 592 aa5.82□□□□□ -1.48
SNRNP40-205ENST00000486941 STK26Q9P289 416 aa5.82□□□□□ -1.48
SNRNP40-205ENST00000486941 KNDC1Q76NI1 1749 aa5.82□□□□□ -1.48
SNRNP40-205ENST00000486941 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.82□□□□□ -1.48
SNRNP40-205ENST00000486941 SPATA31A3Q5VYP0 1347 aa5.81□□□□□ -1.48
SNRNP40-205ENST00000486941 RGPD8O14715 1765 aaPredicted RBP5.81□□□□□ -1.48
SNRNP40-205ENST00000486941 NPEPPSL1A6NEC2 478 aa5.81□□□□□ -1.48
SNRNP40-205ENST00000486941 PATE3B3GLJ2 98 aa5.81□□□□□ -1.48
SNRNP40-205ENST00000486941 DGKIO75912 1065 aa5.81□□□□□ -1.48
SNRNP40-205ENST00000486941 COL6A2P12110 1019 aa5.81□□□□□ -1.48
SNRNP40-205ENST00000486941 C6P13671 934 aa5.81□□□□□ -1.48
SNRNP40-205ENST00000486941 MAP4K2Q12851 820 aa5.81□□□□□ -1.48
SNRNP40-205ENST00000486941 NFATC3Q12968 1075 aa5.81□□□□□ -1.48
SNRNP40-205ENST00000486941 CHRNA2Q15822 529 aa5.81□□□□□ -1.48
SNRNP40-205ENST00000486941 ZNF585AQ6P3V2 769 aa5.81□□□□□ -1.48
SNRNP40-205ENST00000486941 UNC5CLQ8IV45 518 aa5.81□□□□□ -1.48
SNRNP40-205ENST00000486941 TMEM209Q96SK2 561 aa5.81□□□□□ -1.48
SNRNP40-205ENST00000486941 MPHOSPH9Q99550 1183 aa5.81□□□□□ -1.48
SNRNP40-205ENST00000486941 ZNF747Q9BV97 191 aa5.81□□□□□ -1.48
SNRNP40-205ENST00000486941 GPR27Q9NS67 375 aa5.81□□□□□ -1.48
SNRNP40-205ENST00000486941 FMN2Q9NZ56 1722 aa5.81□□□□□ -1.48
SNRNP40-205ENST00000486941 KIF1AQ12756 1690 aa5.81□□□□□ -1.48
SNRNP40-205ENST00000486941 SLIT2O94813 1529 aa5.8□□□□□ -1.48
SNRNP40-205ENST00000486941 NKRFO15226 690 aaKnown RBP eCLIP5.8□□□□□ -1.48
SNRNP40-205ENST00000486941 CNOT4O95628 575 aaKnown RBP5.8□□□□□ -1.48
SNRNP40-205ENST00000486941 SSBP05455 408 aaKnown RBP eCLIP5.8□□□□□ -1.48
SNRNP40-205ENST00000486941 ACVRL1P37023 503 aa5.8□□□□□ -1.48
SNRNP40-205ENST00000486941 FXNQ16595 210 aa5.8□□□□□ -1.48
SNRNP40-205ENST00000486941 TNNI3KQ59H18 835 aa5.8□□□□□ -1.48
SNRNP40-205ENST00000486941 HABP4Q5JVS0 413 aaKnown RBP5.8□□□□□ -1.48
SNRNP40-205ENST00000486941 TRMT10BQ6PF06 316 aaKnown RBP5.8□□□□□ -1.48
SNRNP40-205ENST00000486941 KRT28Q7Z3Y7 464 aa5.8□□□□□ -1.48
SNRNP40-205ENST00000486941 MCF2L2Q86YR7 1114 aa5.8□□□□□ -1.48
SNRNP40-205ENST00000486941 KLHL36Q8N4N3 616 aa5.8□□□□□ -1.48
SNRNP40-205ENST00000486941 SORCS2Q96PQ0 1159 aa5.8□□□□□ -1.48
SNRNP40-205ENST00000486941 PHF20Q9BVI0 1012 aa5.8□□□□□ -1.48
SNRNP40-205ENST00000486941 C14orf93Q9H972 538 aaKnown RBP5.8□□□□□ -1.48
SNRNP40-205ENST00000486941 CAPN10Q9HC96 672 aa5.8□□□□□ -1.48
SNRNP40-205ENST00000486941 ST7Q9NRC1 585 aa5.8□□□□□ -1.48
SNRNP40-205ENST00000486941 ADAM29Q9UKF5 820 aa5.8□□□□□ -1.48
SNRNP40-205ENST00000486941 ZDHHC9Q9Y397 364 aa5.8□□□□□ -1.48
SNRNP40-205ENST00000486941 PIK3C2GO75747 1445 aa5.8□□□□□ -1.48
SNRNP40-205ENST00000486941 YTHDC2Q9H6S0 1430 aaKnown RBP5.8□□□□□ -1.48
SNRNP40-205ENST00000486941 PLEKHH1Q9ULM0 1364 aa5.8□□□□□ -1.48
SNRNP40-205ENST00000486941 BRWD3Q6RI45 1802 aa5.79□□□□□ -1.48
SNRNP40-205ENST00000486941 IL18BPO95998 194 aa5.79□□□□□ -1.48
SNRNP40-205ENST00000486941 KNG1P01042 644 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms