RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 ZSCAN16Q9H4T2 348 aaPredicted RBP17.43■□□□□ 0.38
SEMA4D-219ENST00000486935 CDY2AQ9Y6F7 541 aa17.43■□□□□ 0.38
SEMA4D-219ENST00000486935 VCANP13611 3396 aa17.43■□□□□ 0.38
SEMA4D-219ENST00000486935 DOCK5Q9H7D0 1870 aa17.42■□□□□ 0.38
SEMA4D-219ENST00000486935 IGLV3-22A0A075B6J6 115 aa17.42■□□□□ 0.38
SEMA4D-219ENST00000486935 CCDC194A0A1B0GVG4 234 aa17.42■□□□□ 0.38
SEMA4D-219ENST00000486935 POTEB3A0JP26 581 aa17.42■□□□□ 0.38
SEMA4D-219ENST00000486935 FAM205CA6NFA0 338 aa17.42■□□□□ 0.38
SEMA4D-219ENST00000486935 M0R2N6 131 aa17.42■□□□□ 0.38
SEMA4D-219ENST00000486935 IPO5O00410 1097 aaKnown RBP17.42■□□□□ 0.38
SEMA4D-219ENST00000486935 U2AF2P26368 475 aaKnown RBP eCLIP17.42■□□□□ 0.38
SEMA4D-219ENST00000486935 HTRA4P83105 476 aaPredicted RBP17.42■□□□□ 0.38
SEMA4D-219ENST00000486935 IER5Q5VY09 327 aa17.42■□□□□ 0.38
SEMA4D-219ENST00000486935 FAM173BQ6P4H8 233 aa17.42■□□□□ 0.38
SEMA4D-219ENST00000486935 POTEBQ6S5H4 581 aa17.42■□□□□ 0.38
SEMA4D-219ENST00000486935 ABHD15Q6UXT9 468 aa17.42■□□□□ 0.38
SEMA4D-219ENST00000486935 BRAPQ7Z569 592 aa17.42■□□□□ 0.38
SEMA4D-219ENST00000486935 CRYGNQ8WXF5 182 aa17.42■□□□□ 0.38
SEMA4D-219ENST00000486935 TNFRSF25Q93038 417 aa17.42■□□□□ 0.38
SEMA4D-219ENST00000486935 YME1L1Q96TA2 773 aa17.42■□□□□ 0.38
SEMA4D-219ENST00000486935 C17orf80Q9BSJ5 609 aa17.42■□□□□ 0.38
SEMA4D-219ENST00000486935 ZNF577Q9BSK1 485 aa17.42■□□□□ 0.38
SEMA4D-219ENST00000486935 PCDHA2Q9Y5H9 948 aa17.42■□□□□ 0.38
SEMA4D-219ENST00000486935 IGKV6D-21A0A0A0MT36 114 aa17.41■□□□□ 0.38
SEMA4D-219ENST00000486935 DHX15O43143 795 aaKnown RBP17.41■□□□□ 0.38
SEMA4D-219ENST00000486935 MRPS6P82932 125 aaKnown RBP17.41■□□□□ 0.38
SEMA4D-219ENST00000486935 TFF2Q03403 129 aa17.41■□□□□ 0.38
SEMA4D-219ENST00000486935 TMEM62Q0P6H9 643 aa17.41■□□□□ 0.38
SEMA4D-219ENST00000486935 PRR16Q569H4 304 aa17.41■□□□□ 0.38
SEMA4D-219ENST00000486935 EARS2Q5JPH6 523 aaKnown RBP17.41■□□□□ 0.38
SEMA4D-219ENST00000486935 FBXO47Q5MNV8 452 aa17.41■□□□□ 0.38
SEMA4D-219ENST00000486935 FAM160B1Q5W0V3 765 aa17.41■□□□□ 0.38
SEMA4D-219ENST00000486935 SWSAP1Q6NVH7 229 aa17.41■□□□□ 0.38
SEMA4D-219ENST00000486935 MIS18BP1Q6P0N0 1132 aa17.41■□□□□ 0.38
SEMA4D-219ENST00000486935 KRT25Q7Z3Z0 450 aa17.41■□□□□ 0.38
SEMA4D-219ENST00000486935 REV3LO60673 3130 aa17.41■□□□□ 0.38
SEMA4D-219ENST00000486935 M0QZ92 97 aa17.4■□□□□ 0.38
SEMA4D-219ENST00000486935 ENPP3O14638 875 aa17.4■□□□□ 0.38
SEMA4D-219ENST00000486935 KLRC1P26715 233 aa17.4■□□□□ 0.38
SEMA4D-219ENST00000486935 SLC26A2P50443 739 aa17.4■□□□□ 0.38
SEMA4D-219ENST00000486935 NONOQ15233 471 aaKnown RBP eCLIP17.4■□□□□ 0.38
SEMA4D-219ENST00000486935 PDXDC2PQ6P474 469 aa17.4■□□□□ 0.38
SEMA4D-219ENST00000486935 FBXO22Q8NEZ5 403 aa17.4■□□□□ 0.38
SEMA4D-219ENST00000486935 ZNF302Q9NR11 478 aa17.4■□□□□ 0.38
SEMA4D-219ENST00000486935 TBC1D22BQ9NU19 505 aa17.4■□□□□ 0.38
SEMA4D-219ENST00000486935 LMCD1Q9NZU5 365 aa17.4■□□□□ 0.38
SEMA4D-219ENST00000486935 TRANK1O15050 2925 aa17.4■□□□□ 0.38
SEMA4D-219ENST00000486935 HBP1O60381 514 aa17.39■□□□□ 0.37
SEMA4D-219ENST00000486935 RPLP2P05387 115 aaKnown RBP17.39■□□□□ 0.37
SEMA4D-219ENST00000486935 ATP2B1P20020 1258 aa17.39■□□□□ 0.37
SEMA4D-219ENST00000486935 SETQ01105 290 aaPredicted RBP17.39■□□□□ 0.37
SEMA4D-219ENST00000486935 INF2Q27J81 1249 aa17.39■□□□□ 0.37
SEMA4D-219ENST00000486935 MTHFD1LQ6UB35 978 aa17.39■□□□□ 0.37
SEMA4D-219ENST00000486935 TSHZ1Q6ZSZ6 1077 aa17.39■□□□□ 0.37
SEMA4D-219ENST00000486935 TRMT1LQ7Z2T5 733 aaKnown RBP17.39■□□□□ 0.37
SEMA4D-219ENST00000486935 CCDC60Q8IWA6 550 aaPredicted RBP17.39■□□□□ 0.37
SEMA4D-219ENST00000486935 CKAP2LQ8IYA6 745 aa17.39■□□□□ 0.37
SEMA4D-219ENST00000486935 SP7Q8TDD2 431 aaPredicted RBP17.39■□□□□ 0.37
SEMA4D-219ENST00000486935 ATP8B4Q8TF62 1192 aa17.39■□□□□ 0.37
SEMA4D-219ENST00000486935 CHAMP1Q96JM3 812 aa17.39■□□□□ 0.37
SEMA4D-219ENST00000486935 AGO3Q9H9G7 860 aaKnown RBP17.39■□□□□ 0.37
SEMA4D-219ENST00000486935 NOL7Q9UMY1 257 aaKnown RBP17.39■□□□□ 0.37
SEMA4D-219ENST00000486935 ATP6V1DQ9Y5K8 247 aa17.39■□□□□ 0.37
SEMA4D-219ENST00000486935 CD52P31358 61 aa17.38■□□□□ 0.37
SEMA4D-219ENST00000486935 CIITAP33076 1130 aa17.38■□□□□ 0.37
SEMA4D-219ENST00000486935 AAK1Q2M2I8 961 aa17.38■□□□□ 0.37
SEMA4D-219ENST00000486935 EPC2Q52LR7 807 aa17.38■□□□□ 0.37
SEMA4D-219ENST00000486935 NME8Q8N427 588 aa17.38■□□□□ 0.37
SEMA4D-219ENST00000486935 ADAMTS19Q8TE59 1207 aa17.38■□□□□ 0.37
SEMA4D-219ENST00000486935 CELF4Q9BZC1 486 aaKnown RBP17.38■□□□□ 0.37
SEMA4D-219ENST00000486935 TCEAL9Q9UHQ7 104 aa17.38■□□□□ 0.37
SEMA4D-219ENST00000486935 TRPV2Q9Y5S1 764 aa17.38■□□□□ 0.37
SEMA4D-219ENST00000486935 XIRP2A4UGR9 3374 aa17.37■□□□□ 0.37
SEMA4D-219ENST00000486935 SMIM35A0A1B0GVV1 85 aa17.37■□□□□ 0.37
SEMA4D-219ENST00000486935 NCLP19338 710 aaKnown RBP17.37■□□□□ 0.37
SEMA4D-219ENST00000486935 ATP4AP20648 1035 aa17.37■□□□□ 0.37
SEMA4D-219ENST00000486935 KRT76Q01546 638 aa17.37■□□□□ 0.37
SEMA4D-219ENST00000486935 DNM1Q05193 864 aaKnown RBP17.37■□□□□ 0.37
SEMA4D-219ENST00000486935 ZNF484Q5JVG2 852 aa17.37■□□□□ 0.37
SEMA4D-219ENST00000486935 ZNF746Q6NUN9 644 aaPredicted RBP17.37■□□□□ 0.37
SEMA4D-219ENST00000486935 TBCKQ8TEA7 893 aa17.37■□□□□ 0.37
SEMA4D-219ENST00000486935 HLA-CQ95604 372 aa17.37■□□□□ 0.37
SEMA4D-219ENST00000486935 COG5Q9UP83 839 aa17.37■□□□□ 0.37
SEMA4D-219ENST00000486935 SAMM50Q9Y512 469 aa17.37■□□□□ 0.37
SEMA4D-219ENST00000486935 PTPRSQ13332 1948 aa17.37■□□□□ 0.37
SEMA4D-219ENST00000486935 SPTBN5Q9NRC6 3674 aaKnown RBP17.36■□□□□ 0.37
SEMA4D-219ENST00000486935 TNFRSF10AO00220 468 aa17.36■□□□□ 0.37
SEMA4D-219ENST00000486935 EDIL3O43854 480 aa17.36■□□□□ 0.37
SEMA4D-219ENST00000486935 PSAPP07602 524 aa17.36■□□□□ 0.37
SEMA4D-219ENST00000486935 BMP1P13497 986 aa17.36■□□□□ 0.37
SEMA4D-219ENST00000486935 USP11P51784 963 aa17.36■□□□□ 0.37
SEMA4D-219ENST00000486935 KCNQ1P51787 676 aa17.36■□□□□ 0.37
SEMA4D-219ENST00000486935 NBR1Q14596 966 aa17.36■□□□□ 0.37
SEMA4D-219ENST00000486935 RTN4RL1Q86UN2 441 aaPredicted RBP17.36■□□□□ 0.37
SEMA4D-219ENST00000486935 TMEM192Q8IY95 271 aa17.36■□□□□ 0.37
SEMA4D-219ENST00000486935 SMAP1Q8IYB5 467 aaPredicted RBP17.36■□□□□ 0.37
SEMA4D-219ENST00000486935 FIBCD1Q8N539 461 aa17.36■□□□□ 0.37
SEMA4D-219ENST00000486935 ZNF396Q96N95 335 aaPredicted RBP17.36■□□□□ 0.37
SEMA4D-219ENST00000486935 SAMD11Q96NU1 681 aa17.36■□□□□ 0.37
SEMA4D-219ENST00000486935 GABBR1Q9UBS5 961 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms