RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 CNTNAP5Q8WYK1 1306 aa22.84■■□□□ 1.25
PHF1-208ENST00000486845 DENND3A2RUS2 1198 aa22.84■■□□□ 1.25
PHF1-208ENST00000486845 TMEM221A6NGB7 291 aa22.84■■□□□ 1.25
PHF1-208ENST00000486845 M0R296 226 aa22.84■■□□□ 1.25
PHF1-208ENST00000486845 MEIS1O00470 390 aa22.84■■□□□ 1.25
PHF1-208ENST00000486845 BACH1O14867 736 aa22.84■■□□□ 1.25
PHF1-208ENST00000486845 PPFIA3O75145 1194 aa22.84■■□□□ 1.25
PHF1-208ENST00000486845 RPS6KA5O75582 802 aa22.84■■□□□ 1.25
PHF1-208ENST00000486845 CBX2Q14781 532 aaPredicted RBP22.84■■□□□ 1.25
PHF1-208ENST00000486845 PKN1Q16512 942 aa22.84■■□□□ 1.25
PHF1-208ENST00000486845 CREB3L3Q68CJ9 461 aa22.84■■□□□ 1.25
PHF1-208ENST00000486845 MICAL1Q8TDZ2 1067 aa22.84■■□□□ 1.25
PHF1-208ENST00000486845 ATP8B4Q8TF62 1192 aa22.84■■□□□ 1.25
PHF1-208ENST00000486845 PGBD1Q96JS3 809 aa22.84■■□□□ 1.25
PHF1-208ENST00000486845 TLR9Q9NR96 1032 aa22.84■■□□□ 1.25
PHF1-208ENST00000486845 RBM28Q9NW13 759 aaKnown RBP22.84■■□□□ 1.25
PHF1-208ENST00000486845 NOC2LQ9Y3T9 749 aaKnown RBP22.84■■□□□ 1.25
PHF1-208ENST00000486845 PCDHGC5Q9Y5F6 944 aa22.84■■□□□ 1.25
PHF1-208ENST00000486845 COL1A2P08123 1366 aa22.84■■□□□ 1.25
PHF1-208ENST00000486845 FNDC1Q4ZHG4 1894 aaPredicted RBP22.83■■□□□ 1.25
PHF1-208ENST00000486845 IGKV6D-21A0A0A0MT36 114 aa22.83■■□□□ 1.25
PHF1-208ENST00000486845 TBKBP1A7MCY6 615 aa22.83■■□□□ 1.25
PHF1-208ENST00000486845 hCG_1984214I3L0E3 225 aa22.83■■□□□ 1.25
PHF1-208ENST00000486845 MGEA5O60502 916 aa22.83■■□□□ 1.25
PHF1-208ENST00000486845 SREBF1P36956 1147 aa22.83■■□□□ 1.25
PHF1-208ENST00000486845 AP3B2Q13367 1082 aa22.83■■□□□ 1.25
PHF1-208ENST00000486845 TYW1BQ6NUM6 668 aa22.83■■□□□ 1.25
PHF1-208ENST00000486845 SLC24A5Q71RS6 500 aa22.83■■□□□ 1.25
PHF1-208ENST00000486845 ZNF713Q8N859 430 aaPredicted RBP22.83■■□□□ 1.25
PHF1-208ENST00000486845 CDCA3Q99618 268 aaPredicted RBP22.83■■□□□ 1.25
PHF1-208ENST00000486845 ADAM2Q99965 735 aa22.83■■□□□ 1.25
PHF1-208ENST00000486845 PHF7Q9BWX1 381 aaPredicted RBP22.83■■□□□ 1.25
PHF1-208ENST00000486845 GLT8D2Q9H1C3 349 aa22.83■■□□□ 1.25
PHF1-208ENST00000486845 RGS18Q9NS28 235 aa22.83■■□□□ 1.25
PHF1-208ENST00000486845 GPR182O15218 404 aa22.82■■□□□ 1.24
PHF1-208ENST00000486845 CCNE2O96020 404 aa22.82■■□□□ 1.24
PHF1-208ENST00000486845 ZNF76P36508 570 aa22.82■■□□□ 1.24
PHF1-208ENST00000486845 ZXDAP98168 799 aa22.82■■□□□ 1.24
PHF1-208ENST00000486845 ZNF484Q5JVG2 852 aa22.82■■□□□ 1.24
PHF1-208ENST00000486845 PDE12Q6L8Q7 609 aaKnown RBP22.82■■□□□ 1.24
PHF1-208ENST00000486845 ABHD15Q6UXT9 468 aa22.82■■□□□ 1.24
PHF1-208ENST00000486845 NIPA1Q7RTP0 329 aa22.82■■□□□ 1.24
PHF1-208ENST00000486845 KIAA0319LQ8IZA0 1049 aa22.82■■□□□ 1.24
PHF1-208ENST00000486845 PBXIP1Q96AQ6 731 aa22.82■■□□□ 1.24
PHF1-208ENST00000486845 C9IYK1 514 aa22.81■■□□□ 1.24
PHF1-208ENST00000486845 DDX39AO00148 427 aaKnown RBP22.81■■□□□ 1.24
PHF1-208ENST00000486845 FGF18O76093 207 aa22.81■■□□□ 1.24
PHF1-208ENST00000486845 NECTIN1Q15223 517 aa22.81■■□□□ 1.24
PHF1-208ENST00000486845 DUSP6Q16828 381 aa22.81■■□□□ 1.24
PHF1-208ENST00000486845 PDXDC2PQ6P474 469 aa22.81■■□□□ 1.24
PHF1-208ENST00000486845 APOA5Q6Q788 366 aa22.81■■□□□ 1.24
PHF1-208ENST00000486845 SUGP1Q8IWZ8 645 aaKnown RBP22.81■■□□□ 1.24
PHF1-208ENST00000486845 THNSL1Q8IYQ7 743 aa22.81■■□□□ 1.24
PHF1-208ENST00000486845 PRRX2Q99811 253 aa22.81■■□□□ 1.24
PHF1-208ENST00000486845 ESYT1Q9BSJ8 1104 aa22.81■■□□□ 1.24
PHF1-208ENST00000486845 CDHR5Q9HBB8 845 aa22.81■■□□□ 1.24
PHF1-208ENST00000486845 ZNF302Q9NR11 478 aa22.81■■□□□ 1.24
PHF1-208ENST00000486845 ST3GAL5Q9UNP4 418 aa22.81■■□□□ 1.24
PHF1-208ENST00000486845 SRGAP2BP0DMP2 458 aa22.8■■□□□ 1.24
PHF1-208ENST00000486845 ATF7P17544 494 aaPredicted RBP22.8■■□□□ 1.24
PHF1-208ENST00000486845 PTPN5P54829 565 aa22.8■■□□□ 1.24
PHF1-208ENST00000486845 RTN1Q16799 776 aa22.8■■□□□ 1.24
PHF1-208ENST00000486845 MIS18BP1Q6P0N0 1132 aa22.8■■□□□ 1.24
PHF1-208ENST00000486845 CCDC60Q8IWA6 550 aaPredicted RBP22.8■■□□□ 1.24
PHF1-208ENST00000486845 COLGALT1Q8NBJ5 622 aa22.8■■□□□ 1.24
PHF1-208ENST00000486845 TMEM40Q8WWA1 233 aa22.8■■□□□ 1.24
PHF1-208ENST00000486845 NEK1Q96PY6 1258 aa22.8■■□□□ 1.24
PHF1-208ENST00000486845 ATP6V0A4Q9HBG4 840 aa22.8■■□□□ 1.24
PHF1-208ENST00000486845 SMCO2A6NFE2 343 aa22.79■■□□□ 1.24
PHF1-208ENST00000486845 PER2O15055 1255 aa22.79■■□□□ 1.24
PHF1-208ENST00000486845 LAG3P18627 525 aa22.79■■□□□ 1.24
PHF1-208ENST00000486845 FAM102BQ5T8I3 360 aa22.79■■□□□ 1.24
PHF1-208ENST00000486845 PLA2G4DQ86XP0 818 aa22.79■■□□□ 1.24
PHF1-208ENST00000486845 PRSS33Q8NF86 280 aa22.79■■□□□ 1.24
PHF1-208ENST00000486845 RPGRIP1Q96KN7 1286 aa22.79■■□□□ 1.24
PHF1-208ENST00000486845 ANO2Q9NQ90 1003 aa22.79■■□□□ 1.24
PHF1-208ENST00000486845 TYW1Q9NV66 732 aaKnown RBP22.79■■□□□ 1.24
PHF1-208ENST00000486845 TMEM161AQ9NX61 479 aa22.79■■□□□ 1.24
PHF1-208ENST00000486845 TMEM260Q9NX78 707 aa22.79■■□□□ 1.24
PHF1-208ENST00000486845 BARHL2Q9NY43 387 aa22.79■■□□□ 1.24
PHF1-208ENST00000486845 V9GY48 417 aaPredicted RBP22.79■■□□□ 1.24
PHF1-208ENST00000486845 EVPLQ92817 2033 aa22.79■■□□□ 1.24
PHF1-208ENST00000486845 ZBTB42B2RXF5 422 aa22.78■■□□□ 1.24
PHF1-208ENST00000486845 FSCN2O14926 492 aa22.78■■□□□ 1.24
PHF1-208ENST00000486845 ZBTB43O43298 467 aa22.78■■□□□ 1.24
PHF1-208ENST00000486845 CLK2P49760 499 aaKnown RBP22.78■■□□□ 1.24
PHF1-208ENST00000486845 CRYBB1P53674 252 aaPredicted RBP22.78■■□□□ 1.24
PHF1-208ENST00000486845 ERVFC1P60507 584 aa22.78■■□□□ 1.24
PHF1-208ENST00000486845 FUT2Q10981 343 aa22.78■■□□□ 1.24
PHF1-208ENST00000486845 RNF20Q5VTR2 975 aa22.78■■□□□ 1.24
PHF1-208ENST00000486845 VN1R2Q8NFZ6 395 aa22.78■■□□□ 1.24
PHF1-208ENST00000486845 SUSD6Q92537 303 aa22.78■■□□□ 1.24
PHF1-208ENST00000486845 ELAC1Q9H777 363 aaKnown RBP22.78■■□□□ 1.24
PHF1-208ENST00000486845 LZTS1Q9Y250 596 aa22.78■■□□□ 1.24
PHF1-208ENST00000486845 ZDBF2Q9HCK1 2354 aa22.77■■□□□ 1.24
PHF1-208ENST00000486845 C22orf31O95567 290 aa22.77■■□□□ 1.24
PHF1-208ENST00000486845 SIGLEC14Q08ET2 396 aa22.77■■□□□ 1.24
PHF1-208ENST00000486845 KIZQ2M2Z5 673 aa22.77■■□□□ 1.24
PHF1-208ENST00000486845 SWSAP1Q6NVH7 229 aa22.77■■□□□ 1.24
PHF1-208ENST00000486845 FAM228AQ86W67 206 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms