RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 KRT40Q6A162 431 aa22.06■■□□□ 1.12
SNX5-213ENST00000486039 FAM117BQ6P1L5 589 aa22.06■■□□□ 1.12
SNX5-213ENST00000486039 MYOCDQ8IZQ8 938 aa22.06■■□□□ 1.12
SNX5-213ENST00000486039 ZBED2Q9BTP6 218 aa22.06■■□□□ 1.12
SNX5-213ENST00000486039 KCNMB3Q9NPA1 279 aa22.06■■□□□ 1.12
SNX5-213ENST00000486039 BTBD18B2RXH4 712 aa22.05■■□□□ 1.12
SNX5-213ENST00000486039 CCNT1O60563 726 aaKnown RBP22.05■■□□□ 1.12
SNX5-213ENST00000486039 C22orf31O95567 290 aa22.05■■□□□ 1.12
SNX5-213ENST00000486039 AMHP03971 560 aa22.05■■□□□ 1.12
SNX5-213ENST00000486039 POU3F3P20264 500 aaPredicted RBP22.05■■□□□ 1.12
SNX5-213ENST00000486039 MIER3Q7Z3K6 550 aa22.05■■□□□ 1.12
SNX5-213ENST00000486039 KIAA0319LQ8IZA0 1049 aa22.05■■□□□ 1.12
SNX5-213ENST00000486039 MICALL1Q8N3F8 863 aa22.05■■□□□ 1.12
SNX5-213ENST00000486039 NME8Q8N427 588 aa22.05■■□□□ 1.12
SNX5-213ENST00000486039 RDM1Q8NG50 284 aa22.05■■□□□ 1.12
SNX5-213ENST00000486039 ZSCAN31Q96LW9 406 aaPredicted RBP22.05■■□□□ 1.12
SNX5-213ENST00000486039 ASB2Q96Q27 587 aa22.05■■□□□ 1.12
SNX5-213ENST00000486039 RAD9AQ99638 391 aa22.05■■□□□ 1.12
SNX5-213ENST00000486039 AGO3Q9H9G7 860 aaKnown RBP22.05■■□□□ 1.12
SNX5-213ENST00000486039 BRMS1Q9HCU9 246 aa22.05■■□□□ 1.12
SNX5-213ENST00000486039 TRPV2Q9Y5S1 764 aa22.05■■□□□ 1.12
SNX5-213ENST00000486039 EPOPA6NHQ4 379 aa22.04■■□□□ 1.12
SNX5-213ENST00000486039 OATP04181 439 aa22.04■■□□□ 1.12
SNX5-213ENST00000486039 GCFC2P16383 781 aaKnown RBP22.04■■□□□ 1.12
SNX5-213ENST00000486039 MRPS5P82675 430 aaKnown RBP22.04■■□□□ 1.12
SNX5-213ENST00000486039 TSHZ1Q6ZSZ6 1077 aa22.04■■□□□ 1.12
SNX5-213ENST00000486039 SPRED2Q7Z698 418 aa22.04■■□□□ 1.12
SNX5-213ENST00000486039 DIS3L2Q8IYB7 885 aaKnown RBP22.04■■□□□ 1.12
SNX5-213ENST00000486039 ARNTL2Q8WYA1 636 aa22.04■■□□□ 1.12
SNX5-213ENST00000486039 HAS1Q92839 578 aa22.04■■□□□ 1.12
SNX5-213ENST00000486039 TOP1MTQ969P6 601 aa22.04■■□□□ 1.12
SNX5-213ENST00000486039 FAM167AQ96KS9 214 aa22.04■■□□□ 1.12
SNX5-213ENST00000486039 LLPHQ9BRT6 129 aaKnown RBP22.04■■□□□ 1.12
SNX5-213ENST00000486039 CELF4Q9BZC1 486 aaKnown RBP22.04■■□□□ 1.12
SNX5-213ENST00000486039 TSPYL2Q9H2G4 693 aaPredicted RBP22.04■■□□□ 1.12
SNX5-213ENST00000486039 MTCH2Q9Y6C9 303 aa22.04■■□□□ 1.12
SNX5-213ENST00000486039 MICAL3Q7RTP6 2002 aa22.04■■□□□ 1.12
SNX5-213ENST00000486039 M0QZ92 97 aa22.03■■□□□ 1.12
SNX5-213ENST00000486039 GTPBP6O43824 516 aaPredicted RBP22.03■■□□□ 1.12
SNX5-213ENST00000486039 PRKCEQ02156 737 aa22.03■■□□□ 1.12
SNX5-213ENST00000486039 FAM20AQ96MK3 541 aa22.03■■□□□ 1.12
SNX5-213ENST00000486039 SH2B1Q9NRF2 756 aaPredicted RBP22.03■■□□□ 1.12
SNX5-213ENST00000486039 NRBP2Q9NSY0 501 aa22.03■■□□□ 1.12
SNX5-213ENST00000486039 VAV3Q9UKW4 847 aa22.03■■□□□ 1.12
SNX5-213ENST00000486039 CEP131Q9UPN4 1083 aa22.03■■□□□ 1.12
SNX5-213ENST00000486039 SQORQ9Y6N5 450 aa22.03■■□□□ 1.12
SNX5-213ENST00000486039 KDM3AQ9Y4C1 1321 aa22.03■■□□□ 1.12
SNX5-213ENST00000486039 EML1O00423 815 aa22.02■■□□□ 1.12
SNX5-213ENST00000486039 CD52P31358 61 aa22.02■■□□□ 1.12
SNX5-213ENST00000486039 TRIM29Q14134 588 aa22.02■■□□□ 1.12
SNX5-213ENST00000486039 RABEP1Q15276 862 aa22.02■■□□□ 1.12
SNX5-213ENST00000486039 POTEDQ86YR6 584 aa22.02■■□□□ 1.12
SNX5-213ENST00000486039 NAP1L4Q99733 375 aaKnown RBP22.02■■□□□ 1.12
SNX5-213ENST00000486039 CDHR5Q9HBB8 845 aa22.02■■□□□ 1.12
SNX5-213ENST00000486039 TBX3O15119 743 aa22.01■■□□□ 1.11
SNX5-213ENST00000486039 STBD1O95210 358 aa22.01■■□□□ 1.11
SNX5-213ENST00000486039 HTRA4P83105 476 aaPredicted RBP22.01■■□□□ 1.11
SNX5-213ENST00000486039 PPP2R5CQ13362 524 aa22.01■■□□□ 1.11
SNX5-213ENST00000486039 INSL6Q9Y581 213 aa22.01■■□□□ 1.11
SNX5-213ENST00000486039 TRANK1O15050 2925 aa22■■□□□ 1.11
SNX5-213ENST00000486039 MYH9P35579 1960 aaKnown RBP22■■□□□ 1.11
SNX5-213ENST00000486039 WNT7AO00755 349 aa22■■□□□ 1.11
SNX5-213ENST00000486039 ENPP3O14638 875 aa22■■□□□ 1.11
SNX5-213ENST00000486039 MAGEB2O15479 319 aa22■■□□□ 1.11
SNX5-213ENST00000486039 UPP2O95045 317 aa22■■□□□ 1.11
SNX5-213ENST00000486039 GUCY1B3Q02153 619 aa22■■□□□ 1.11
SNX5-213ENST00000486039 METTL13Q8N6R0 699 aa22■■□□□ 1.11
SNX5-213ENST00000486039 LINC01465Q8N7H1 131 aa22■■□□□ 1.11
SNX5-213ENST00000486039 BANK1Q8NDB2 785 aa22■■□□□ 1.11
SNX5-213ENST00000486039 LINC01599Q8WXQ3 324 aa22■■□□□ 1.11
SNX5-213ENST00000486039 PADI3Q9ULW8 664 aa22■■□□□ 1.11
SNX5-213ENST00000486039 GINS2Q9Y248 185 aa22■■□□□ 1.11
SNX5-213ENST00000486039 TTC28Q96AY4 2481 aa21.99■■□□□ 1.11
SNX5-213ENST00000486039 LINC01553A4QN01 128 aa21.99■■□□□ 1.11
SNX5-213ENST00000486039 TMEM150BA6NC51 233 aa21.99■■□□□ 1.11
SNX5-213ENST00000486039 TNFRSF10AO00220 468 aa21.99■■□□□ 1.11
SNX5-213ENST00000486039 CLCN3P51790 818 aa21.99■■□□□ 1.11
SNX5-213ENST00000486039 TARBP2Q15633 366 aaKnown RBP21.99■■□□□ 1.11
SNX5-213ENST00000486039 EFCAB12Q6NXP0 572 aa21.99■■□□□ 1.11
SNX5-213ENST00000486039 RTN4RL1Q86UN2 441 aaPredicted RBP21.99■■□□□ 1.11
SNX5-213ENST00000486039 SP7Q8TDD2 431 aaPredicted RBP21.99■■□□□ 1.11
SNX5-213ENST00000486039 TMEM40Q8WWA1 233 aa21.99■■□□□ 1.11
SNX5-213ENST00000486039 C8orf76Q96K31 380 aa21.99■■□□□ 1.11
SNX5-213ENST00000486039 CEP89Q96ST8 783 aa21.99■■□□□ 1.11
SNX5-213ENST00000486039 PPP1R16BQ96T49 567 aa21.99■■□□□ 1.11
SNX5-213ENST00000486039 NIFKQ9BYG3 293 aaKnown RBP21.99■■□□□ 1.11
SNX5-213ENST00000486039 WDR81Q562E7 1941 aa21.98■■□□□ 1.11
SNX5-213ENST00000486039 GPR32O75388 356 aa21.98■■□□□ 1.11
SNX5-213ENST00000486039 VTNP04004 478 aa21.98■■□□□ 1.11
SNX5-213ENST00000486039 HMGN5P82970 282 aaKnown RBP21.98■■□□□ 1.11
SNX5-213ENST00000486039 GRB10Q13322 594 aa21.98■■□□□ 1.11
SNX5-213ENST00000486039 SKIV2LQ15477 1246 aaKnown RBP21.98■■□□□ 1.11
SNX5-213ENST00000486039 KIZQ2M2Z5 673 aa21.98■■□□□ 1.11
SNX5-213ENST00000486039 TMEM266Q2M3C6 531 aa21.98■■□□□ 1.11
SNX5-213ENST00000486039 XKR3Q5GH77 459 aa21.98■■□□□ 1.11
SNX5-213ENST00000486039 LRRC71Q8N4P6 559 aa21.98■■□□□ 1.11
SNX5-213ENST00000486039 UPF2Q9HAU5 1272 aaKnown RBP21.98■■□□□ 1.11
SNX5-213ENST00000486039 NOC2LQ9Y3T9 749 aaKnown RBP21.98■■□□□ 1.11
SNX5-213ENST00000486039 MARCH6O60337 910 aa21.97■■□□□ 1.11
SNX5-213ENST00000486039 LPXNO60711 386 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms