RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 CRIPAKQ8N1N5 446 aa19.44■□□□□ 0.7
SMC4-216ENST00000485645 BBXQ8WY36 941 aaPredicted RBP19.44■□□□□ 0.7
SMC4-216ENST00000485645 PABPC5Q96DU9 382 aaKnown RBP19.44■□□□□ 0.7
SMC4-216ENST00000485645 PLVAPQ9BX97 442 aa19.44■□□□□ 0.7
SMC4-216ENST00000485645 MAFBQ9Y5Q3 323 aaPredicted RBP19.44■□□□□ 0.7
SMC4-216ENST00000485645 MYH9P35579 1960 aaKnown RBP19.44■□□□□ 0.7
SMC4-216ENST00000485645 EVPLQ92817 2033 aa19.44■□□□□ 0.7
SMC4-216ENST00000485645 GRM6O15303 877 aa19.43■□□□□ 0.7
SMC4-216ENST00000485645 EPB41L2O43491 1005 aaKnown RBP19.43■□□□□ 0.7
SMC4-216ENST00000485645 RPS6KA5O75582 802 aa19.43■□□□□ 0.7
SMC4-216ENST00000485645 NFX1Q12986 1120 aaKnown RBP19.43■□□□□ 0.7
SMC4-216ENST00000485645 TMEM266Q2M3C6 531 aa19.43■□□□□ 0.7
SMC4-216ENST00000485645 PUS10Q3MIT2 529 aaKnown RBP19.43■□□□□ 0.7
SMC4-216ENST00000485645 ODR4Q5SWX8 454 aa19.43■□□□□ 0.7
SMC4-216ENST00000485645 PTCRAQ6ISU1 281 aaPredicted RBP19.43■□□□□ 0.7
SMC4-216ENST00000485645 EP400NLQ6ZTU2 488 aa19.43■□□□□ 0.7
SMC4-216ENST00000485645 RUFY3Q7L099 469 aa19.43■□□□□ 0.7
SMC4-216ENST00000485645 NEK9Q8TD19 979 aa19.43■□□□□ 0.7
SMC4-216ENST00000485645 TMX1Q9H3N1 280 aa19.43■□□□□ 0.7
SMC4-216ENST00000485645 NCOA5Q9HCD5 579 aaKnown RBP19.43■□□□□ 0.7
SMC4-216ENST00000485645 VPS54Q9P1Q0 977 aa19.43■□□□□ 0.7
SMC4-216ENST00000485645 PCDHA10Q9Y5I2 948 aa19.43■□□□□ 0.7
SMC4-216ENST00000485645 ZBTB42B2RXF5 422 aa19.42■□□□□ 0.7
SMC4-216ENST00000485645 H3BQ06 376 aaPredicted RBP19.42■□□□□ 0.7
SMC4-216ENST00000485645 NCK2O43639 380 aa19.42■□□□□ 0.7
SMC4-216ENST00000485645 TRMT1LQ7Z2T5 733 aaKnown RBP19.42■□□□□ 0.7
SMC4-216ENST00000485645 EPHX3Q9H6B9 360 aa19.42■□□□□ 0.7
SMC4-216ENST00000485645 CDHR5Q9HBB8 845 aa19.42■□□□□ 0.7
SMC4-216ENST00000485645 SH3GLB2Q9NR46 395 aa19.42■□□□□ 0.7
SMC4-216ENST00000485645 GABBR1Q9UBS5 961 aa19.42■□□□□ 0.7
SMC4-216ENST00000485645 LRFN2Q9ULH4 789 aa19.42■□□□□ 0.7
SMC4-216ENST00000485645 NOC2LQ9Y3T9 749 aaKnown RBP19.42■□□□□ 0.7
SMC4-216ENST00000485645 SAMM50Q9Y512 469 aa19.42■□□□□ 0.7
SMC4-216ENST00000485645 MRPL42Q9Y6G3 142 aaKnown RBP19.42■□□□□ 0.7
SMC4-216ENST00000485645 GRXCR2A6NFK2 248 aa19.41■□□□□ 0.7
SMC4-216ENST00000485645 NEFLP07196 543 aa19.41■□□□□ 0.7
SMC4-216ENST00000485645 IL9P15248 144 aa19.41■□□□□ 0.7
SMC4-216ENST00000485645 SARSP49591 514 aaKnown RBP19.41■□□□□ 0.7
SMC4-216ENST00000485645 NLRP5P59047 1200 aa19.41■□□□□ 0.7
SMC4-216ENST00000485645 TOB2Q14106 344 aaPredicted RBP19.41■□□□□ 0.7
SMC4-216ENST00000485645 COL19A1Q14993 1142 aa19.41■□□□□ 0.7
SMC4-216ENST00000485645 PAN2Q504Q3 1202 aaKnown RBP19.41■□□□□ 0.7
SMC4-216ENST00000485645 FAM178BQ8IXR5 827 aa19.41■□□□□ 0.7
SMC4-216ENST00000485645 TRIM22Q8IYM9 498 aa19.41■□□□□ 0.7
SMC4-216ENST00000485645 METTL13Q8N6R0 699 aa19.41■□□□□ 0.7
SMC4-216ENST00000485645 P2RX5Q93086 422 aa19.41■□□□□ 0.7
SMC4-216ENST00000485645 LENG9Q96B70 501 aa19.41■□□□□ 0.7
SMC4-216ENST00000485645 ZSWIM6Q9HCJ5 1215 aa19.41■□□□□ 0.7
SMC4-216ENST00000485645 ERVK-5Q9HDB9 667 aa19.41■□□□□ 0.7
SMC4-216ENST00000485645 ALG13Q9NP73 1137 aaKnown RBP19.41■□□□□ 0.7
SMC4-216ENST00000485645 CLDND1Q9NY35 253 aa19.41■□□□□ 0.7
SMC4-216ENST00000485645 CEP131Q9UPN4 1083 aa19.41■□□□□ 0.7
SMC4-216ENST00000485645 CYP46A1Q9Y6A2 500 aa19.41■□□□□ 0.7
SMC4-216ENST00000485645 DENND3A2RUS2 1198 aa19.4■□□□□ 0.7
SMC4-216ENST00000485645 WDR64B1ANS9 1081 aa19.4■□□□□ 0.7
SMC4-216ENST00000485645 GPR182O15218 404 aa19.4■□□□□ 0.7
SMC4-216ENST00000485645 C22orf31O95567 290 aa19.4■□□□□ 0.7
SMC4-216ENST00000485645 MMP1P03956 469 aa19.4■□□□□ 0.7
SMC4-216ENST00000485645 IBSPP21815 317 aaPredicted RBP19.4■□□□□ 0.7
SMC4-216ENST00000485645 USP11P51784 963 aa19.4■□□□□ 0.7
SMC4-216ENST00000485645 SSRP1Q08945 709 aaKnown RBP19.4■□□□□ 0.7
SMC4-216ENST00000485645 KIZQ2M2Z5 673 aa19.4■□□□□ 0.7
SMC4-216ENST00000485645 NAALADL2Q58DX5 795 aa19.4■□□□□ 0.7
SMC4-216ENST00000485645 TMEM40Q8WWA1 233 aa19.4■□□□□ 0.7
SMC4-216ENST00000485645 FAM167AQ96KS9 214 aa19.4■□□□□ 0.7
SMC4-216ENST00000485645 CD320Q9NPF0 282 aa19.4■□□□□ 0.7
SMC4-216ENST00000485645 RNF216Q9NWF9 866 aaPredicted RBP19.4■□□□□ 0.7
SMC4-216ENST00000485645 ST3GAL5Q9UNP4 418 aa19.4■□□□□ 0.7
SMC4-216ENST00000485645 PLAGL2Q9UPG8 496 aa19.4■□□□□ 0.7
SMC4-216ENST00000485645 PCDHB7Q9Y5E2 793 aa19.4■□□□□ 0.7
SMC4-216ENST00000485645 CPLX1O14810 134 aa19.39■□□□□ 0.69
SMC4-216ENST00000485645 MSH4O15457 936 aa19.39■□□□□ 0.69
SMC4-216ENST00000485645 MAGEB2O15479 319 aa19.39■□□□□ 0.69
SMC4-216ENST00000485645 MGEA5O60502 916 aa19.39■□□□□ 0.69
SMC4-216ENST00000485645 CENPBP07199 599 aaPredicted RBP19.39■□□□□ 0.69
SMC4-216ENST00000485645 CRYBB1P53674 252 aaPredicted RBP19.39■□□□□ 0.69
SMC4-216ENST00000485645 GJD3Q8N144 294 aa19.39■□□□□ 0.69
SMC4-216ENST00000485645 ZNF274Q96GC6 653 aaPredicted RBP19.39■□□□□ 0.69
SMC4-216ENST00000485645 PPP1R16BQ96T49 567 aa19.39■□□□□ 0.69
SMC4-216ENST00000485645 OSMRQ99650 979 aa19.39■□□□□ 0.69
SMC4-216ENST00000485645 ADAM2Q99965 735 aa19.39■□□□□ 0.69
SMC4-216ENST00000485645 C22orf23Q9BZE7 217 aa19.39■□□□□ 0.69
SMC4-216ENST00000485645 DISC1Q9NRI5 854 aa19.39■□□□□ 0.69
SMC4-216ENST00000485645 RGS18Q9NS28 235 aa19.39■□□□□ 0.69
SMC4-216ENST00000485645 C1orf112Q9NSG2 853 aa19.39■□□□□ 0.69
SMC4-216ENST00000485645 FAM50BQ9Y247 325 aa19.39■□□□□ 0.69
SMC4-216ENST00000485645 EDIL3O43854 480 aa19.38■□□□□ 0.69
SMC4-216ENST00000485645 CSPG5O95196 566 aa19.38■□□□□ 0.69
SMC4-216ENST00000485645 VTNP04004 478 aa19.38■□□□□ 0.69
SMC4-216ENST00000485645 SSTR3P32745 418 aaPredicted RBP19.38■□□□□ 0.69
SMC4-216ENST00000485645 GATMP50440 423 aa19.38■□□□□ 0.69
SMC4-216ENST00000485645 HYAL1Q12794 435 aa19.38■□□□□ 0.69
SMC4-216ENST00000485645 SLC24A5Q71RS6 500 aa19.38■□□□□ 0.69
SMC4-216ENST00000485645 TBCKQ8TEA7 893 aa19.38■□□□□ 0.69
SMC4-216ENST00000485645 KHSRPQ92945 711 aaKnown RBP eCLIP19.38■□□□□ 0.691e-6■□□□□ 9
SMC4-216ENST00000485645 RIT2Q99578 217 aa19.38■□□□□ 0.69
SMC4-216ENST00000485645 TM6SF1Q9BZW5 370 aa19.38■□□□□ 0.69
SMC4-216ENST00000485645 NRBP2Q9NSY0 501 aa19.38■□□□□ 0.69
SMC4-216ENST00000485645 RAPGEFL1Q9UHV5 662 aa19.38■□□□□ 0.69
SMC4-216ENST00000485645 ATG2AQ2TAZ0 1938 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms