RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 BTBD18B2RXH4 712 aa14.55□□□□□ -0.08
HDAC1-209ENST00000484305 CCNT1O60563 726 aaKnown RBP14.55□□□□□ -0.08
HDAC1-209ENST00000484305 C22orf31O95567 290 aa14.55□□□□□ -0.08
HDAC1-209ENST00000484305 PRKCEQ02156 737 aa14.55□□□□□ -0.08
HDAC1-209ENST00000484305 KRT40Q6A162 431 aa14.55□□□□□ -0.08
HDAC1-209ENST00000484305 PPP4R3AQ6IN85 833 aa14.55□□□□□ -0.08
HDAC1-209ENST00000484305 KIAA0319LQ8IZA0 1049 aa14.55□□□□□ -0.08
HDAC1-209ENST00000484305 NME8Q8N427 588 aa14.55□□□□□ -0.08
HDAC1-209ENST00000484305 ZSCAN31Q96LW9 406 aaPredicted RBP14.55□□□□□ -0.08
HDAC1-209ENST00000484305 CELF4Q9BZC1 486 aaKnown RBP14.55□□□□□ -0.08
HDAC1-209ENST00000484305 AGO3Q9H9G7 860 aaKnown RBP14.55□□□□□ -0.08
HDAC1-209ENST00000484305 BRMS1Q9HCU9 246 aa14.55□□□□□ -0.08
HDAC1-209ENST00000484305 KCNMB3Q9NPA1 279 aa14.55□□□□□ -0.08
HDAC1-209ENST00000484305 TRPV2Q9Y5S1 764 aa14.55□□□□□ -0.08
HDAC1-209ENST00000484305 EPOPA6NHQ4 379 aa14.54□□□□□ -0.08
HDAC1-209ENST00000484305 M0QZ92 97 aa14.54□□□□□ -0.08
HDAC1-209ENST00000484305 RFXAPO00287 272 aa14.54□□□□□ -0.08
HDAC1-209ENST00000484305 OATP04181 439 aa14.54□□□□□ -0.08
HDAC1-209ENST00000484305 GCFC2P16383 781 aaKnown RBP14.54□□□□□ -0.08
HDAC1-209ENST00000484305 CD52P31358 61 aa14.54□□□□□ -0.08
HDAC1-209ENST00000484305 TSHZ1Q6ZSZ6 1077 aa14.54□□□□□ -0.08
HDAC1-209ENST00000484305 DIS3L2Q8IYB7 885 aaKnown RBP14.54□□□□□ -0.08
HDAC1-209ENST00000484305 RDM1Q8NG50 284 aa14.54□□□□□ -0.08
HDAC1-209ENST00000484305 HAS1Q92839 578 aa14.54□□□□□ -0.08
HDAC1-209ENST00000484305 TOP1MTQ969P6 601 aa14.54□□□□□ -0.08
HDAC1-209ENST00000484305 FAM167AQ96KS9 214 aa14.54□□□□□ -0.08
HDAC1-209ENST00000484305 LLPHQ9BRT6 129 aaKnown RBP14.54□□□□□ -0.08
HDAC1-209ENST00000484305 CDHR5Q9HBB8 845 aa14.54□□□□□ -0.08
HDAC1-209ENST00000484305 NRBP2Q9NSY0 501 aa14.54□□□□□ -0.08
HDAC1-209ENST00000484305 TTC3P53804 2025 aa14.53□□□□□ -0.08
HDAC1-209ENST00000484305 KDM3AQ9Y4C1 1321 aa14.53□□□□□ -0.08
HDAC1-209ENST00000484305 EML1O00423 815 aa14.53□□□□□ -0.08
HDAC1-209ENST00000484305 UPP2O95045 317 aa14.53□□□□□ -0.08
HDAC1-209ENST00000484305 IGFBP4P22692 258 aa14.53□□□□□ -0.08
HDAC1-209ENST00000484305 HTRA4P83105 476 aaPredicted RBP14.53□□□□□ -0.08
HDAC1-209ENST00000484305 GUCY1B3Q02153 619 aa14.53□□□□□ -0.08
HDAC1-209ENST00000484305 TRIM29Q14134 588 aa14.53□□□□□ -0.08
HDAC1-209ENST00000484305 METTL13Q8N6R0 699 aa14.53□□□□□ -0.08
HDAC1-209ENST00000484305 ARNTL2Q8WYA1 636 aa14.53□□□□□ -0.08
HDAC1-209ENST00000484305 FAM20AQ96MK3 541 aa14.53□□□□□ -0.08
HDAC1-209ENST00000484305 SH2B1Q9NRF2 756 aaPredicted RBP14.53□□□□□ -0.08
HDAC1-209ENST00000484305 VAV3Q9UKW4 847 aa14.53□□□□□ -0.08
HDAC1-209ENST00000484305 CEP131Q9UPN4 1083 aa14.53□□□□□ -0.08
HDAC1-209ENST00000484305 INSL6Q9Y581 213 aa14.53□□□□□ -0.08
HDAC1-209ENST00000484305 SQORQ9Y6N5 450 aa14.53□□□□□ -0.08
HDAC1-209ENST00000484305 LINC01553A4QN01 128 aa14.52□□□□□ -0.09
HDAC1-209ENST00000484305 TMEM150BA6NC51 233 aa14.52□□□□□ -0.09
HDAC1-209ENST00000484305 ENPP3O14638 875 aa14.52□□□□□ -0.09
HDAC1-209ENST00000484305 TBX3O15119 743 aa14.52□□□□□ -0.09
HDAC1-209ENST00000484305 STBD1O95210 358 aa14.52□□□□□ -0.09
HDAC1-209ENST00000484305 VTNP04004 478 aa14.52□□□□□ -0.09
HDAC1-209ENST00000484305 CLCN3P51790 818 aa14.52□□□□□ -0.09
HDAC1-209ENST00000484305 PPP2R5CQ13362 524 aa14.52□□□□□ -0.09
HDAC1-209ENST00000484305 RTN4RL1Q86UN2 441 aaPredicted RBP14.52□□□□□ -0.09
HDAC1-209ENST00000484305 USP38Q8NB14 1042 aa14.52□□□□□ -0.09
HDAC1-209ENST00000484305 BANK1Q8NDB2 785 aa14.52□□□□□ -0.09
HDAC1-209ENST00000484305 TMEM40Q8WWA1 233 aa14.52□□□□□ -0.09
HDAC1-209ENST00000484305 PPP1R16BQ96T49 567 aa14.52□□□□□ -0.09
HDAC1-209ENST00000484305 NAP1L4Q99733 375 aaKnown RBP14.52□□□□□ -0.09
HDAC1-209ENST00000484305 PADI3Q9ULW8 664 aa14.52□□□□□ -0.09
HDAC1-209ENST00000484305 GINS2Q9Y248 185 aa14.52□□□□□ -0.09
HDAC1-209ENST00000484305 PRUNE2Q8WUY3 3088 aa14.52□□□□□ -0.09
HDAC1-209ENST00000484305 COL4A4P53420 1690 aaPredicted RBP14.52□□□□□ -0.09
HDAC1-209ENST00000484305 PRRC2BQ5JSZ5 2229 aaKnown RBP14.51□□□□□ -0.09
HDAC1-209ENST00000484305 NLRC5Q86WI3 1866 aa14.51□□□□□ -0.09
HDAC1-209ENST00000484305 TRANK1O15050 2925 aa14.51□□□□□ -0.09
HDAC1-209ENST00000484305 WNT7AO00755 349 aa14.51□□□□□ -0.09
HDAC1-209ENST00000484305 MAGEB2O15479 319 aa14.51□□□□□ -0.09
HDAC1-209ENST00000484305 PAK2Q13177 524 aa14.51□□□□□ -0.09
HDAC1-209ENST00000484305 RABEP1Q15276 862 aa14.51□□□□□ -0.09
HDAC1-209ENST00000484305 TARBP2Q15633 366 aaKnown RBP14.51□□□□□ -0.09
HDAC1-209ENST00000484305 CCDC85BQ15834 202 aaPredicted RBP14.51□□□□□ -0.09
HDAC1-209ENST00000484305 KIZQ2M2Z5 673 aa14.51□□□□□ -0.09
HDAC1-209ENST00000484305 TMEM266Q2M3C6 531 aa14.51□□□□□ -0.09
HDAC1-209ENST00000484305 XKR3Q5GH77 459 aa14.51□□□□□ -0.09
HDAC1-209ENST00000484305 EFCAB12Q6NXP0 572 aa14.51□□□□□ -0.09
HDAC1-209ENST00000484305 LRRC71Q8N4P6 559 aa14.51□□□□□ -0.09
HDAC1-209ENST00000484305 LINC01465Q8N7H1 131 aa14.51□□□□□ -0.09
HDAC1-209ENST00000484305 LINC01599Q8WXQ3 324 aa14.51□□□□□ -0.09
HDAC1-209ENST00000484305 PPM1EQ8WY54 764 aa14.51□□□□□ -0.09
HDAC1-209ENST00000484305 C8orf76Q96K31 380 aa14.51□□□□□ -0.09
HDAC1-209ENST00000484305 SH2D3AQ9BRG2 576 aa14.51□□□□□ -0.09
HDAC1-209ENST00000484305 NIFKQ9BYG3 293 aaKnown RBP14.51□□□□□ -0.09
HDAC1-209ENST00000484305 MTUS1Q9ULD2 1270 aa14.51□□□□□ -0.09
HDAC1-209ENST00000484305 NOC2LQ9Y3T9 749 aaKnown RBP14.51□□□□□ -0.09
HDAC1-209ENST00000484305 UNC80Q8N2C7 3258 aa14.5□□□□□ -0.09
HDAC1-209ENST00000484305 MARCH6O60337 910 aa14.5□□□□□ -0.09
HDAC1-209ENST00000484305 GPR32O75388 356 aa14.5□□□□□ -0.09
HDAC1-209ENST00000484305 SPIRE1Q08AE8 756 aa14.5□□□□□ -0.09
HDAC1-209ENST00000484305 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.5□□□□□ -0.09
HDAC1-209ENST00000484305 SP7Q8TDD2 431 aaPredicted RBP14.5□□□□□ -0.09
HDAC1-209ENST00000484305 TGS1Q96RS0 853 aaKnown RBP14.5□□□□□ -0.09
HDAC1-209ENST00000484305 CEP89Q96ST8 783 aa14.5□□□□□ -0.09
HDAC1-209ENST00000484305 YME1L1Q96TA2 773 aa14.5□□□□□ -0.09
HDAC1-209ENST00000484305 TMX1Q9H3N1 280 aa14.5□□□□□ -0.09
HDAC1-209ENST00000484305 UPF2Q9HAU5 1272 aaKnown RBP14.5□□□□□ -0.09
HDAC1-209ENST00000484305 SEPT9Q9UHD8 586 aaPredicted RBP14.5□□□□□ -0.09
HDAC1-209ENST00000484305 DDX11L8A8MPP1 907 aa14.49□□□□□ -0.09
HDAC1-209ENST00000484305 LPXNO60711 386 aa14.49□□□□□ -0.09
HDAC1-209ENST00000484305 RPS6KA5O75582 802 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms