RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 UTP14CQ5TAP6 766 aaKnown RBP7.78□□□□□ -1.16
BRCA1-216ENST00000484087 PCNX4Q63HM2 1172 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 ARL6IP4Q66PJ3 421 aaKnown RBP7.78□□□□□ -1.16
BRCA1-216ENST00000484087 GDF6Q6KF10 455 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-216ENST00000484087 SLC43A3Q8NBI5 491 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 GJA10Q969M2 543 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 FAM161BQ96MY7 647 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 CLIC6Q96NY7 704 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 CTAGE1Q96RT6 745 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 MTG1Q9BT17 334 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-216ENST00000484087 DNAJC25Q9H1X3 360 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 RIC8AQ9NPQ8 531 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 USP25Q9UHP3 1055 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 Q9Y3F1 56 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 UNC80Q8N2C7 3258 aa7.78□□□□□ -1.16
BRCA1-216ENST00000484087 LOXHD1Q8IVV2 1947 aa7.77□□□□□ -1.16
BRCA1-216ENST00000484087 GRXCR1A8MXD5 290 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 GOLGA6L6A8MZA4 724 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 B4DLN1 442 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 SPATA31C2B4DYI2 1134 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 NKRFO15226 690 aaKnown RBP eCLIP7.77□□□□□ -1.17
BRCA1-216ENST00000484087 POLR2DO15514 142 aaKnown RBP7.77□□□□□ -1.17
BRCA1-216ENST00000484087 ZEB2O60315 1214 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 KCNA2P16389 499 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 MARK3P27448 753 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 MCM7P33993 719 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 PSEN2P49810 448 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 MRPL12P52815 198 aaKnown RBP7.77□□□□□ -1.17
BRCA1-216ENST00000484087 NLRP12P59046 1061 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 ATP2C1P98194 919 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-216ENST00000484087 FPGSQ05932 587 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 PTGDRQ13258 359 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 KIAA0753Q2KHM9 967 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 EARS2Q5JPH6 523 aaKnown RBP7.77□□□□□ -1.17
BRCA1-216ENST00000484087 KRBA2Q6ZNG9 492 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 C16orf59Q7L2K0 433 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 REXO1Q8N1G1 1221 aaKnown RBP7.77□□□□□ -1.17
BRCA1-216ENST00000484087 DHX38Q92620 1227 aaKnown RBP7.77□□□□□ -1.17
BRCA1-216ENST00000484087 VWCEQ96DN2 955 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 PDLIM2Q96JY6 352 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.77□□□□□ -1.17
BRCA1-216ENST00000484087 OSBPL7Q9BZF2 842 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 CSRNP2Q9H175 543 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 HIPK3Q9H422 1215 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 MLXIPQ9HAP2 919 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 MAP3K20Q9NYL2 800 aaKnown RBP7.77□□□□□ -1.17
BRCA1-216ENST00000484087 HDAC6Q9UBN7 1215 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 CCDC39Q9UFE4 941 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 DACH1Q9UI36 760 aa7.77□□□□□ -1.17
BRCA1-216ENST00000484087 VWA3AA6NCI4 1184 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 SMTNL1A8MU46 457 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 FAM86B1E9PN63 330 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 M0R2N6 131 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 TK2O00142 265 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 TLR3O15455 904 aaKnown RBP7.76□□□□□ -1.17
BRCA1-216ENST00000484087 EDIL3O43854 480 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 SMC2O95347 1197 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 F2P00734 622 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 TIMP1P01033 207 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 LGALS2P05162 132 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 FAM86B2P0C5J1 330 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 BMP8BP34820 402 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 LONP1P36776 959 aaKnown RBP7.76□□□□□ -1.17
BRCA1-216ENST00000484087 ITGB3BPQ13352 177 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-216ENST00000484087 MTMR1Q13613 665 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 TCTN1Q2MV58 587 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 GNPTABQ3T906 1256 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 MCTP2Q6DN12 878 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 DTHD1Q6ZMT9 781 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 DEFB128Q7Z7B8 93 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 NEK8Q86SG6 692 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 PPTC7Q8NI37 304 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 TOX2Q96NM4 488 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 GPR20Q99678 358 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 NAP1L4Q99733 375 aaKnown RBP7.76□□□□□ -1.17
BRCA1-216ENST00000484087 C16orf70Q9BSU1 422 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 NOC4LQ9BVI4 516 aaKnown RBP7.76□□□□□ -1.17
BRCA1-216ENST00000484087 ZMYND15Q9H091 742 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 CBX8Q9HC52 389 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 UBIAD1Q9Y5Z9 338 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 MROH7Q68CQ1 1323 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 KAT6AQ92794 2004 aa7.76□□□□□ -1.17
BRCA1-216ENST00000484087 NOP56O00567 594 aaKnown RBP7.75□□□□□ -1.17
BRCA1-216ENST00000484087 HRO43593 1189 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 CABYRO75952 493 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 ADCY5O95622 1261 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 TPM3P06753 285 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 MSNP26038 577 aaKnown RBP7.75□□□□□ -1.17
BRCA1-216ENST00000484087 ICAM3P32942 547 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 TCF7P36402 384 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-216ENST00000484087 PRPHP41219 470 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 ARHGAP4P98171 946 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 LAMC2Q13753 1193 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 POSTNQ15063 836 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 PTGISQ16647 500 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 DGKDQ16760 1214 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 INF2Q27J81 1249 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 LETM2Q2VYF4 491 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 LONRF3Q496Y0 759 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 SPECC1Q5M775 1068 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms