RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 NEK9Q8TD19 979 aa20.46■□□□□ 0.87
ATG4B-221ENST00000483778 ERVK-5Q9HDB9 667 aa20.46■□□□□ 0.87
ATG4B-221ENST00000483778 KDM3AQ9Y4C1 1321 aa20.46■□□□□ 0.87
ATG4B-221ENST00000483778 GRXCR2A6NFK2 248 aa20.45■□□□□ 0.86
ATG4B-221ENST00000483778 DTNBO60941 627 aa20.45■□□□□ 0.86
ATG4B-221ENST00000483778 RB1P06400 928 aa20.45■□□□□ 0.86
ATG4B-221ENST00000483778 IFNAR1P17181 557 aa20.45■□□□□ 0.86
ATG4B-221ENST00000483778 LTBRP36941 435 aa20.45■□□□□ 0.86
ATG4B-221ENST00000483778 SLC26A2P50443 739 aa20.45■□□□□ 0.86
ATG4B-221ENST00000483778 NFX1Q12986 1120 aaKnown RBP20.45■□□□□ 0.86
ATG4B-221ENST00000483778 PAK2Q13177 524 aa20.45■□□□□ 0.86
ATG4B-221ENST00000483778 COL19A1Q14993 1142 aa20.45■□□□□ 0.86
ATG4B-221ENST00000483778 PTCRAQ6ISU1 281 aaPredicted RBP20.45■□□□□ 0.86
ATG4B-221ENST00000483778 MIS18BP1Q6P0N0 1132 aa20.45■□□□□ 0.86
ATG4B-221ENST00000483778 EP400NLQ6ZTU2 488 aa20.45■□□□□ 0.86
ATG4B-221ENST00000483778 FAM178BQ8IXR5 827 aa20.45■□□□□ 0.86
ATG4B-221ENST00000483778 NSUN3Q9H649 340 aaKnown RBP20.45■□□□□ 0.86
ATG4B-221ENST00000483778 MAFBQ9Y5Q3 323 aaPredicted RBP20.45■□□□□ 0.86
ATG4B-221ENST00000483778 M0QZ92 97 aa20.44■□□□□ 0.86
ATG4B-221ENST00000483778 C22orf31O95567 290 aa20.44■□□□□ 0.86
ATG4B-221ENST00000483778 CIITAP33076 1130 aa20.44■□□□□ 0.86
ATG4B-221ENST00000483778 DLX2Q07687 328 aaPredicted RBP20.44■□□□□ 0.86
ATG4B-221ENST00000483778 HYAL1Q12794 435 aa20.44■□□□□ 0.86
ATG4B-221ENST00000483778 TIGD5Q53EQ6 642 aa20.44■□□□□ 0.86
ATG4B-221ENST00000483778 ZNF484Q5JVG2 852 aa20.44■□□□□ 0.86
ATG4B-221ENST00000483778 NPAS4Q8IUM7 802 aa20.44■□□□□ 0.86
ATG4B-221ENST00000483778 CKAP2LQ8IYA6 745 aa20.44■□□□□ 0.86
ATG4B-221ENST00000483778 TNPO1Q92973 898 aaKnown RBP20.44■□□□□ 0.86
ATG4B-221ENST00000483778 ZSWIM6Q9HCJ5 1215 aa20.44■□□□□ 0.86
ATG4B-221ENST00000483778 GABBR1Q9UBS5 961 aa20.44■□□□□ 0.86
ATG4B-221ENST00000483778 PLAGL2Q9UPG8 496 aa20.44■□□□□ 0.86
ATG4B-221ENST00000483778 ZNF862O60290 1169 aa20.43■□□□□ 0.86
ATG4B-221ENST00000483778 VTNP04004 478 aa20.43■□□□□ 0.86
ATG4B-221ENST00000483778 KIZQ2M2Z5 673 aa20.43■□□□□ 0.86
ATG4B-221ENST00000483778 ZNF746Q6NUN9 644 aaPredicted RBP20.43■□□□□ 0.86
ATG4B-221ENST00000483778 RUFY3Q7L099 469 aa20.43■□□□□ 0.86
ATG4B-221ENST00000483778 PABPC5Q96DU9 382 aaKnown RBP20.43■□□□□ 0.86
ATG4B-221ENST00000483778 AIFM3Q96NN9 605 aa20.43■□□□□ 0.86
ATG4B-221ENST00000483778 FTHL17Q9BXU8 183 aa20.43■□□□□ 0.86
ATG4B-221ENST00000483778 RNF26Q9BY78 433 aaPredicted RBP20.43■□□□□ 0.86
ATG4B-221ENST00000483778 C11orf16Q9NQ32 467 aa20.43■□□□□ 0.86
ATG4B-221ENST00000483778 TBC1D22BQ9NU19 505 aa20.43■□□□□ 0.86
ATG4B-221ENST00000483778 ST3GAL5Q9UNP4 418 aa20.43■□□□□ 0.86
ATG4B-221ENST00000483778 COL1A2P08123 1366 aa20.43■□□□□ 0.86
ATG4B-221ENST00000483778 MSH4O15457 936 aa20.42■□□□□ 0.86
ATG4B-221ENST00000483778 LINC01565O15544 149 aa20.42■□□□□ 0.86
ATG4B-221ENST00000483778 GPR32O75388 356 aa20.42■□□□□ 0.86
ATG4B-221ENST00000483778 RPLP2P05387 115 aaKnown RBP20.42■□□□□ 0.86
ATG4B-221ENST00000483778 ITGB1P05556 798 aa20.42■□□□□ 0.86
ATG4B-221ENST00000483778 PSMA5P28066 241 aa20.42■□□□□ 0.86
ATG4B-221ENST00000483778 GNA11P29992 359 aa20.42■□□□□ 0.86
ATG4B-221ENST00000483778 AKAP17AQ02040 695 aaKnown RBP20.42■□□□□ 0.86
ATG4B-221ENST00000483778 CMTR2Q8IYT2 770 aaKnown RBP20.42■□□□□ 0.86
ATG4B-221ENST00000483778 SPPL3Q8TCT6 385 aa20.42■□□□□ 0.86
ATG4B-221ENST00000483778 CCDC12Q8WUD4 166 aaPredicted RBP20.42■□□□□ 0.86
ATG4B-221ENST00000483778 ADAM2Q99965 735 aa20.42■□□□□ 0.86
ATG4B-221ENST00000483778 LRFN3Q9BTN0 628 aa20.42■□□□□ 0.86
ATG4B-221ENST00000483778 C11orf84Q9BUA3 381 aaPredicted RBP20.42■□□□□ 0.86
ATG4B-221ENST00000483778 CLDND1Q9NY35 253 aa20.42■□□□□ 0.86
ATG4B-221ENST00000483778 HCSTQ9UBK5 93 aa20.42■□□□□ 0.86
ATG4B-221ENST00000483778 PCDHA10Q9Y5I2 948 aa20.42■□□□□ 0.86
ATG4B-221ENST00000483778 FAM86C2PA6NEL3 165 aa20.41■□□□□ 0.86
ATG4B-221ENST00000483778 RPS6KA5O75582 802 aa20.41■□□□□ 0.86
ATG4B-221ENST00000483778 REC8O95072 547 aa20.41■□□□□ 0.86
ATG4B-221ENST00000483778 UGCGQ16739 394 aa20.41■□□□□ 0.86
ATG4B-221ENST00000483778 CTC1Q2NKJ3 1217 aa20.41■□□□□ 0.86
ATG4B-221ENST00000483778 FAM102BQ5T8I3 360 aa20.41■□□□□ 0.86
ATG4B-221ENST00000483778 MCTP2Q6DN12 878 aa20.41■□□□□ 0.86
ATG4B-221ENST00000483778 METTL13Q8N6R0 699 aa20.41■□□□□ 0.86
ATG4B-221ENST00000483778 KLHL23Q8NBE8 558 aa20.41■□□□□ 0.86
ATG4B-221ENST00000483778 BBXQ8WY36 941 aaPredicted RBP20.41■□□□□ 0.86
ATG4B-221ENST00000483778 ZNF668Q96K58 619 aaPredicted RBP20.41■□□□□ 0.86
ATG4B-221ENST00000483778 OSMRQ99650 979 aa20.41■□□□□ 0.86
ATG4B-221ENST00000483778 UPF3BQ9BZI7 483 aaKnown RBP20.41■□□□□ 0.86
ATG4B-221ENST00000483778 IGFLR1Q9H665 355 aa20.41■□□□□ 0.86
ATG4B-221ENST00000483778 PCDHGC5Q9Y5F6 944 aa20.41■□□□□ 0.86
ATG4B-221ENST00000483778 PSAPP07602 524 aa20.4■□□□□ 0.86
ATG4B-221ENST00000483778 IRS1P35568 1242 aa20.4■□□□□ 0.86
ATG4B-221ENST00000483778 SARSP49591 514 aaKnown RBP20.4■□□□□ 0.86
ATG4B-221ENST00000483778 CLCN3P51790 818 aa20.4■□□□□ 0.86
ATG4B-221ENST00000483778 SETQ01105 290 aaPredicted RBP20.4■□□□□ 0.86
ATG4B-221ENST00000483778 NPY5RQ15761 445 aa20.4■□□□□ 0.86
ATG4B-221ENST00000483778 CLUL1Q15846 466 aa20.4■□□□□ 0.86
ATG4B-221ENST00000483778 ADGRD2Q7Z7M1 963 aa20.4■□□□□ 0.86
ATG4B-221ENST00000483778 FAM228AQ86W67 206 aa20.4■□□□□ 0.86
ATG4B-221ENST00000483778 C1QTNF1Q9BXJ1 281 aa20.4■□□□□ 0.86
ATG4B-221ENST00000483778 C9IYK1 514 aa20.39■□□□□ 0.85
ATG4B-221ENST00000483778 STAG3L1P0CL83 205 aa20.39■□□□□ 0.85
ATG4B-221ENST00000483778 CRYBB1P53674 252 aaPredicted RBP20.39■□□□□ 0.85
ATG4B-221ENST00000483778 NLRP5P59047 1200 aa20.39■□□□□ 0.85
ATG4B-221ENST00000483778 STK3Q13188 491 aa20.39■□□□□ 0.85
ATG4B-221ENST00000483778 DSC3Q14574 896 aa20.39■□□□□ 0.85
ATG4B-221ENST00000483778 SMAP1Q8IYB5 467 aaPredicted RBP20.39■□□□□ 0.85
ATG4B-221ENST00000483778 GJD3Q8N144 294 aa20.39■□□□□ 0.85
ATG4B-221ENST00000483778 LRRC71Q8N4P6 559 aa20.39■□□□□ 0.85
ATG4B-221ENST00000483778 LINC01465Q8N7H1 131 aa20.39■□□□□ 0.85
ATG4B-221ENST00000483778 BICD2Q8TD16 824 aa20.39■□□□□ 0.85
ATG4B-221ENST00000483778 TBCKQ8TEA7 893 aa20.39■□□□□ 0.85
ATG4B-221ENST00000483778 SLC5A5Q92911 643 aa20.39■□□□□ 0.85
ATG4B-221ENST00000483778 PLVAPQ9BX97 442 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms