RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 MAN1C1Q9NR34 630 aa6.63□□□□□ -1.35
UPF3B-203ENST00000478840 HSPBP1Q9NZL4 362 aa6.63□□□□□ -1.35
UPF3B-203ENST00000478840 PPP2R3BQ9Y5P8 575 aa6.63□□□□□ -1.35
UPF3B-203ENST00000478840 UBA6A0AVT1 1052 aaPredicted RBP6.62□□□□□ -1.35
UPF3B-203ENST00000478840 ELL2O00472 640 aaPredicted RBP6.62□□□□□ -1.35
UPF3B-203ENST00000478840 OFD1O75665 1012 aa6.62□□□□□ -1.35
UPF3B-203ENST00000478840 HPXP02790 462 aa6.62□□□□□ -1.35
UPF3B-203ENST00000478840 C5AR1P21730 350 aa6.62□□□□□ -1.35
UPF3B-203ENST00000478840 SNX17Q15036 470 aa6.62□□□□□ -1.35
UPF3B-203ENST00000478840 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.62□□□□□ -1.35
UPF3B-203ENST00000478840 CT83Q5H943 113 aa6.62□□□□□ -1.35
UPF3B-203ENST00000478840 PITRM1Q5JRX3 1037 aa6.62□□□□□ -1.35
UPF3B-203ENST00000478840 TOR2AQ5JU69 321 aa6.62□□□□□ -1.35
UPF3B-203ENST00000478840 IFIT1BQ5T764 474 aaKnown RBP6.62□□□□□ -1.35
UPF3B-203ENST00000478840 KANSL1Q7Z3B3 1105 aa6.62□□□□□ -1.35
UPF3B-203ENST00000478840 LILRA2Q8N149 483 aa6.62□□□□□ -1.35
UPF3B-203ENST00000478840 C7orf31Q8N865 590 aa6.62□□□□□ -1.35
UPF3B-203ENST00000478840 LRGUKQ96M69 825 aa6.62□□□□□ -1.35
UPF3B-203ENST00000478840 TNFRSF12AQ9NP84 129 aa6.62□□□□□ -1.35
UPF3B-203ENST00000478840 DDX20Q9UHI6 824 aaKnown RBP6.62□□□□□ -1.35
UPF3B-203ENST00000478840 PALD1Q9ULE6 856 aa6.62□□□□□ -1.35
UPF3B-203ENST00000478840 NUMBLQ9Y6R0 609 aa6.62□□□□□ -1.35
UPF3B-203ENST00000478840 FRMPD2Q68DX3 1309 aaPredicted RBP6.61□□□□□ -1.35
UPF3B-203ENST00000478840 A0A1W2PQJ5 194 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 PRAMEF25A6NGN4 478 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 LDHAP00338 332 aaKnown RBP6.61□□□□□ -1.35
UPF3B-203ENST00000478840 MMEP08473 750 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 POU2F2P09086 479 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 PNLIPP16233 465 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 FAHP16930 419 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 AOAHP28039 575 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 SLC5A3P53794 718 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 PAN2Q504Q3 1202 aaKnown RBP6.61□□□□□ -1.35
UPF3B-203ENST00000478840 TTC38Q5R3I4 469 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 ZBTB41Q5SVQ8 909 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 BICRALQ6AI39 1079 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 SLC23A3Q6PIS1 610 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 C11orf96Q7Z7L8 435 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 CILP2Q8IUL8 1156 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 MIER2Q8N344 545 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 HPS3Q969F9 1004 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 EAF2Q96CJ1 260 aaPredicted RBP6.61□□□□□ -1.35
UPF3B-203ENST00000478840 SHISA4Q96DD7 197 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 PEX11GQ96HA9 241 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 GBP4Q96PP9 640 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 FOXB1Q99853 325 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 ANO3Q9BYT9 981 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 POFUT1Q9H488 388 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 BTBD7Q9P203 1132 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 USP25Q9UHP3 1055 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 TUBD1Q9UJT1 453 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 NUDT5Q9UKK9 219 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 TMPRSS11EQ9UL52 423 aa6.61□□□□□ -1.35
UPF3B-203ENST00000478840 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.6□□□□□ -1.35
UPF3B-203ENST00000478840 PRSS38A1L453 326 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 AP1G1O43747 822 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 PSPNO60542 156 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 NDUFS2O75306 463 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 ZBTB7AO95365 584 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 PRLP01236 227 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 HRGP04196 525 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 CYBBP04839 570 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 DBHP09172 617 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 FUT4P22083 530 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 GDNFP39905 211 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 HK2P52789 917 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 PICALMQ13492 652 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 MORC3Q14149 939 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 SAFBQ15424 915 aaKnown RBP eCLIP6.6□□□□□ -1.35
UPF3B-203ENST00000478840 MUM1Q2TAK8 710 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 ANO4Q32M45 955 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 TIGD7Q6NT04 549 aaPredicted RBP6.6□□□□□ -1.35
UPF3B-203ENST00000478840 LILRA6Q6PI73 481 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 PAQR3Q6TCH7 311 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 MILR1Q7Z6M3 343 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 PRR18Q8N4B5 295 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 ARRDC4Q8NCT1 418 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 RSAD2Q8WXG1 361 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 AUTS2Q8WXX7 1259 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 RNF38Q9H0F5 515 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 QRSL1Q9H0R6 528 aaKnown RBP6.6□□□□□ -1.35
UPF3B-203ENST00000478840 C19orf73Q9NVV2 129 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 SIT1Q9Y3P8 196 aa6.6□□□□□ -1.35
UPF3B-203ENST00000478840 CTNND1O60716 968 aaKnown RBP6.59□□□□□ -1.35
UPF3B-203ENST00000478840 PRPF6O94906 941 aaKnown RBP6.59□□□□□ -1.35
UPF3B-203ENST00000478840 CLEC2LP0C7M8 214 aa6.59□□□□□ -1.35
UPF3B-203ENST00000478840 OSMP13725 252 aa6.59□□□□□ -1.35
UPF3B-203ENST00000478840 ARL4AP40617 200 aa6.59□□□□□ -1.35
UPF3B-203ENST00000478840 HTR3AP46098 478 aa6.59□□□□□ -1.35
UPF3B-203ENST00000478840 USP14P54578 494 aa6.59□□□□□ -1.35
UPF3B-203ENST00000478840 DBPQ10586 325 aaPredicted RBP6.59□□□□□ -1.35
UPF3B-203ENST00000478840 MYBPC3Q14896 1274 aa6.59□□□□□ -1.35
UPF3B-203ENST00000478840 SLC9A5Q14940 896 aa6.59□□□□□ -1.35
UPF3B-203ENST00000478840 MBNL2Q5VZF2 373 aaKnown RBP6.59□□□□□ -1.35
UPF3B-203ENST00000478840 KIAA1841Q6NSI8 718 aa6.59□□□□□ -1.35
UPF3B-203ENST00000478840 CCDC62Q6P9F0 684 aa6.59□□□□□ -1.35
UPF3B-203ENST00000478840 TSHZ1Q6ZSZ6 1077 aa6.59□□□□□ -1.35
UPF3B-203ENST00000478840 SRGAP1Q7Z6B7 1085 aa6.59□□□□□ -1.35
UPF3B-203ENST00000478840 VSIG10LQ86VR7 867 aa6.59□□□□□ -1.35
UPF3B-203ENST00000478840 LYSMD2Q8IV50 215 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms