RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 TCAF1Q9Y4C2 921 aa6.8□□□□□ -1.32
VPS50-213ENST00000477572 B3GALT1Q9Y5Z6 326 aa6.8□□□□□ -1.32
VPS50-213ENST00000477572 CCDC163A0A0D9SF12 145 aa6.79□□□□□ -1.32
VPS50-213ENST00000477572 C1QTNF3-AMACRE9PGA6 284 aa6.79□□□□□ -1.32
VPS50-213ENST00000477572 M0R2C6 588 aa6.79□□□□□ -1.32
VPS50-213ENST00000477572 PPP1R12AO14974 1030 aaPredicted RBP6.79□□□□□ -1.32
VPS50-213ENST00000477572 HIP1RO75146 1068 aa6.79□□□□□ -1.32
VPS50-213ENST00000477572 STAT5BP51692 787 aa6.79□□□□□ -1.32
VPS50-213ENST00000477572 ZXDAP98168 799 aa6.79□□□□□ -1.32
VPS50-213ENST00000477572 ZNF460Q14592 562 aa6.79□□□□□ -1.32
VPS50-213ENST00000477572 CATSPEREQ5SY80 951 aa6.79□□□□□ -1.32
VPS50-213ENST00000477572 KANK2Q63ZY3 851 aa6.79□□□□□ -1.32
VPS50-213ENST00000477572 FILIP1Q7Z7B0 1213 aa6.79□□□□□ -1.32
VPS50-213ENST00000477572 DLG3Q92796 817 aa6.79□□□□□ -1.32
VPS50-213ENST00000477572 OR10A5Q9H207 317 aa6.79□□□□□ -1.32
VPS50-213ENST00000477572 ZFR2Q9UPR6 939 aaKnown RBP6.79□□□□□ -1.32
VPS50-213ENST00000477572 TSC22D4Q9Y3Q8 395 aa6.79□□□□□ -1.32
VPS50-213ENST00000477572 PLD2O14939 933 aa6.78□□□□□ -1.32
VPS50-213ENST00000477572 KCNQ2O43526 872 aa6.78□□□□□ -1.32
VPS50-213ENST00000477572 CDC14BO60729 498 aa6.78□□□□□ -1.32
VPS50-213ENST00000477572 GLRX3O76003 335 aaKnown RBP6.78□□□□□ -1.32
VPS50-213ENST00000477572 ZBTB48P10074 688 aaPredicted RBP6.78□□□□□ -1.32
VPS50-213ENST00000477572 SELENOPP49908 381 aa6.78□□□□□ -1.32
VPS50-213ENST00000477572 MOGSQ13724 837 aa6.78□□□□□ -1.32
VPS50-213ENST00000477572 PCOLCEQ15113 449 aa6.78□□□□□ -1.32
VPS50-213ENST00000477572 STILQ15468 1287 aa6.78□□□□□ -1.32
VPS50-213ENST00000477572 ZMAT1Q5H9K5 638 aa6.78□□□□□ -1.32
VPS50-213ENST00000477572 SPDYAQ5MJ70 313 aa6.78□□□□□ -1.32
VPS50-213ENST00000477572 SH3TC2Q8TF17 1288 aa6.78□□□□□ -1.32
VPS50-213ENST00000477572 MRFAP1L1Q96HT8 127 aa6.78□□□□□ -1.32
VPS50-213ENST00000477572 SAMD15Q9P1V8 674 aa6.78□□□□□ -1.32
VPS50-213ENST00000477572 MAGEL2Q9UJ55 1249 aa6.78□□□□□ -1.32
VPS50-213ENST00000477572 FAM184BQ9ULE4 1060 aa6.78□□□□□ -1.32
VPS50-213ENST00000477572 TNPO3Q9Y5L0 923 aaKnown RBP6.78□□□□□ -1.32
VPS50-213ENST00000477572 OPA1O60313 960 aa6.77□□□□□ -1.33
VPS50-213ENST00000477572 MRE11P49959 708 aa6.77□□□□□ -1.33
VPS50-213ENST00000477572 NFE2L2Q16236 605 aa6.77□□□□□ -1.33
VPS50-213ENST00000477572 CXXC5Q7LFL8 322 aaKnown RBP6.77□□□□□ -1.33
VPS50-213ENST00000477572 DDX53Q86TM3 631 aaKnown RBP6.77□□□□□ -1.33
VPS50-213ENST00000477572 RTKN2Q8IZC4 609 aa6.77□□□□□ -1.33
VPS50-213ENST00000477572 FUKQ8N0W3 1084 aa6.77□□□□□ -1.33
VPS50-213ENST00000477572 OR14K1Q8NGZ2 314 aa6.77□□□□□ -1.33
VPS50-213ENST00000477572 OR14A2Q96R54 314 aa6.77□□□□□ -1.33
VPS50-213ENST00000477572 OAZ3Q9UMX2 235 aa6.77□□□□□ -1.33
VPS50-213ENST00000477572 A0A0G2JNJ9 132 aa6.76□□□□□ -1.33
VPS50-213ENST00000477572 GOLGA6L22H0YM25 854 aa6.76□□□□□ -1.33
VPS50-213ENST00000477572 MATN2O00339 956 aa6.76□□□□□ -1.33
VPS50-213ENST00000477572 MUSKO15146 869 aa6.76□□□□□ -1.33
VPS50-213ENST00000477572 DNAJC8O75937 253 aaPredicted RBP6.76□□□□□ -1.33
VPS50-213ENST00000477572 FSHBP01225 129 aa6.76□□□□□ -1.33
VPS50-213ENST00000477572 AMHP03971 560 aa6.76□□□□□ -1.33
VPS50-213ENST00000477572 CR2P20023 1033 aa6.76□□□□□ -1.33
VPS50-213ENST00000477572 R3HDM1Q15032 1099 aaKnown RBP6.76□□□□□ -1.33
VPS50-213ENST00000477572 EIF4HQ15056 248 aaKnown RBP6.76□□□□□ -1.33
VPS50-213ENST00000477572 C21orf62-AS1Q17RA5 79 aa6.76□□□□□ -1.33
VPS50-213ENST00000477572 CCDC144BQ3MJ40 725 aa6.76□□□□□ -1.33
VPS50-213ENST00000477572 GRAMD4Q6IC98 578 aa6.76□□□□□ -1.33
VPS50-213ENST00000477572 ZCCHC8Q6NZY4 707 aaKnown RBP6.76□□□□□ -1.33
VPS50-213ENST00000477572 SCYL1Q96KG9 808 aa6.76□□□□□ -1.33
VPS50-213ENST00000477572 ADOQ96SZ5 270 aa6.76□□□□□ -1.33
VPS50-213ENST00000477572 CDK5RAP1Q96SZ6 601 aaKnown RBP6.76□□□□□ -1.33
VPS50-213ENST00000477572 BOCQ9BWV1 1114 aa6.76□□□□□ -1.33
VPS50-213ENST00000477572 Q9UFV3 132 aa6.76□□□□□ -1.33
VPS50-213ENST00000477572 FBXO10Q9UK96 956 aa6.76□□□□□ -1.33
VPS50-213ENST00000477572 ASB1Q9Y576 335 aa6.76□□□□□ -1.33
VPS50-213ENST00000477572 DVL2O14641 736 aa6.75□□□□□ -1.33
VPS50-213ENST00000477572 ARHGAP6O43182 974 aa6.75□□□□□ -1.33
VPS50-213ENST00000477572 SDSP20132 328 aa6.75□□□□□ -1.33
VPS50-213ENST00000477572 MEOX1P50221 254 aa6.75□□□□□ -1.33
VPS50-213ENST00000477572 KIF11P52732 1056 aa6.75□□□□□ -1.33
VPS50-213ENST00000477572 AGBL4Q5VU57 503 aa6.75□□□□□ -1.33
VPS50-213ENST00000477572 PLA2G12BQ9BX93 195 aa6.75□□□□□ -1.33
VPS50-213ENST00000477572 NPTXRO95502 500 aa6.74□□□□□ -1.33
VPS50-213ENST00000477572 SDHAP31040 664 aa6.74□□□□□ -1.33
VPS50-213ENST00000477572 IGFALSP35858 605 aa6.74□□□□□ -1.33
VPS50-213ENST00000477572 MECP2P51608 486 aaKnown RBP6.74□□□□□ -1.33
VPS50-213ENST00000477572 HS1BP3Q53T59 392 aa6.74□□□□□ -1.33
VPS50-213ENST00000477572 PIK3R6Q5UE93 754 aa6.74□□□□□ -1.33
VPS50-213ENST00000477572 TMEM200BQ69YZ2 307 aa6.74□□□□□ -1.33
VPS50-213ENST00000477572 TRIM68Q6AZZ1 485 aa6.74□□□□□ -1.33
VPS50-213ENST00000477572 USP30Q70CQ3 517 aa6.74□□□□□ -1.33
VPS50-213ENST00000477572 RTN4RL1Q86UN2 441 aaPredicted RBP6.74□□□□□ -1.33
VPS50-213ENST00000477572 CHST14Q8NCH0 376 aa6.74□□□□□ -1.33
VPS50-213ENST00000477572 CFHR4Q92496 578 aa6.74□□□□□ -1.33
VPS50-213ENST00000477572 FOXRED1Q96CU9 486 aaPredicted RBP6.74□□□□□ -1.33
VPS50-213ENST00000477572 PUF60Q9UHX1 559 aaKnown RBP6.74□□□□□ -1.33
VPS50-213ENST00000477572 PTPDC1A2A3K4 754 aa6.73□□□□□ -1.33
VPS50-213ENST00000477572 TRAF5O00463 557 aa6.73□□□□□ -1.33
VPS50-213ENST00000477572 AKAP8O43823 692 aaKnown RBP6.73□□□□□ -1.33
VPS50-213ENST00000477572 ASMTLO95671 621 aa6.73□□□□□ -1.33
VPS50-213ENST00000477572 C6P13671 934 aa6.73□□□□□ -1.33
VPS50-213ENST00000477572 COMTP21964 271 aa6.73□□□□□ -1.33
VPS50-213ENST00000477572 APEX1P27695 318 aaKnown RBP6.73□□□□□ -1.33
VPS50-213ENST00000477572 RGS3P49796 1198 aa6.73□□□□□ -1.33
VPS50-213ENST00000477572 ACAP1Q15027 740 aa6.73□□□□□ -1.33
VPS50-213ENST00000477572 FNDC3BQ53EP0 1204 aaKnown RBP6.73□□□□□ -1.33
VPS50-213ENST00000477572 OTOP1Q7RTM1 612 aa6.73□□□□□ -1.33
VPS50-213ENST00000477572 CALML6Q8TD86 181 aa6.73□□□□□ -1.33
VPS50-213ENST00000477572 OR10A2Q9H208 303 aa6.73□□□□□ -1.33
VPS50-213ENST00000477572 PIF1Q9H611 641 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms