RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 NBPF6Q5VWK0 638 aa6.21□□□□□ -1.42
UBR3-209ENST00000477461 HIPK4Q8NE63 616 aa6.21□□□□□ -1.42
UBR3-209ENST00000477461 ERCC4Q92889 916 aaPredicted RBP6.21□□□□□ -1.42
UBR3-209ENST00000477461 WNK4Q96J92 1243 aa6.21□□□□□ -1.42
UBR3-209ENST00000477461 SCYL1Q96KG9 808 aa6.21□□□□□ -1.42
UBR3-209ENST00000477461 NBPF4Q96M43 638 aa6.21□□□□□ -1.42
UBR3-209ENST00000477461 GBP4Q96PP9 640 aa6.21□□□□□ -1.42
UBR3-209ENST00000477461 SRPK1Q96SB4 655 aaKnown RBP6.21□□□□□ -1.42
UBR3-209ENST00000477461 HIRIP3Q9BW71 556 aaPredicted RBP6.21□□□□□ -1.42
UBR3-209ENST00000477461 SNTG2Q9NY99 539 aa6.21□□□□□ -1.42
UBR3-209ENST00000477461 FAM184BQ9ULE4 1060 aa6.21□□□□□ -1.42
UBR3-209ENST00000477461 BICRAQ9NZM4 1560 aa6.2□□□□□ -1.42
UBR3-209ENST00000477461 NPIPB8E9PQR5 432 aa6.2□□□□□ -1.42
UBR3-209ENST00000477461 STAT5BP51692 787 aa6.2□□□□□ -1.42
UBR3-209ENST00000477461 PCOLCEQ15113 449 aa6.2□□□□□ -1.42
UBR3-209ENST00000477461 Q6ZSN1 163 aa6.2□□□□□ -1.42
UBR3-209ENST00000477461 USP51Q70EK9 711 aa6.2□□□□□ -1.42
UBR3-209ENST00000477461 PMFBP1Q8TBY8 1022 aa6.2□□□□□ -1.42
UBR3-209ENST00000477461 ASB15Q8WXK1 588 aa6.2□□□□□ -1.42
UBR3-209ENST00000477461 SCLYQ96I15 445 aa6.2□□□□□ -1.42
UBR3-209ENST00000477461 BTBD2Q9BX70 525 aa6.2□□□□□ -1.42
UBR3-209ENST00000477461 PLA2G12BQ9BX93 195 aa6.2□□□□□ -1.42
UBR3-209ENST00000477461 MAGEL2Q9UJ55 1249 aa6.2□□□□□ -1.42
UBR3-209ENST00000477461 ING1Q9UK53 422 aaPredicted RBP6.2□□□□□ -1.42
UBR3-209ENST00000477461 ARHGAP6O43182 974 aa6.19□□□□□ -1.42
UBR3-209ENST00000477461 RAD17O75943 681 aa6.19□□□□□ -1.42
UBR3-209ENST00000477461 MRE11P49959 708 aa6.19□□□□□ -1.42
UBR3-209ENST00000477461 HERVK_113P62684 666 aa6.19□□□□□ -1.42
UBR3-209ENST00000477461 DGCR2P98153 550 aa6.19□□□□□ -1.42
UBR3-209ENST00000477461 KLF10Q13118 480 aa6.19□□□□□ -1.42
UBR3-209ENST00000477461 FOXE3Q13461 319 aa6.19□□□□□ -1.42
UBR3-209ENST00000477461 SERINC3Q13530 473 aa6.19□□□□□ -1.42
UBR3-209ENST00000477461 MOGSQ13724 837 aa6.19□□□□□ -1.42
UBR3-209ENST00000477461 USP30Q70CQ3 517 aa6.19□□□□□ -1.42
UBR3-209ENST00000477461 NOSTRINQ8IVI9 506 aa6.19□□□□□ -1.42
UBR3-209ENST00000477461 RTKN2Q8IZC4 609 aa6.19□□□□□ -1.42
UBR3-209ENST00000477461 OR14K1Q8NGZ2 314 aa6.19□□□□□ -1.42
UBR3-209ENST00000477461 CSRNP2Q9H175 543 aa6.19□□□□□ -1.42
UBR3-209ENST00000477461 PUF60Q9UHX1 559 aaKnown RBP6.19□□□□□ -1.42
UBR3-209ENST00000477461 A0A0G2JNJ9 132 aa6.18□□□□□ -1.42
UBR3-209ENST00000477461 RASSF10A6NK89 507 aa6.18□□□□□ -1.42
UBR3-209ENST00000477461 FOXP2O15409 715 aa6.18□□□□□ -1.42
UBR3-209ENST00000477461 SUV39H1O43463 412 aa6.18□□□□□ -1.42
UBR3-209ENST00000477461 APPP05067 770 aa6.18□□□□□ -1.42
UBR3-209ENST00000477461 MEOX1P50221 254 aa6.18□□□□□ -1.42
UBR3-209ENST00000477461 EIF4HQ15056 248 aaKnown RBP6.18□□□□□ -1.42
UBR3-209ENST00000477461 STILQ15468 1287 aa6.18□□□□□ -1.42
UBR3-209ENST00000477461 LONRF2Q1L5Z9 754 aa6.18□□□□□ -1.42
UBR3-209ENST00000477461 KANK2Q63ZY3 851 aa6.18□□□□□ -1.42
UBR3-209ENST00000477461 IGFL4Q6B9Z1 124 aa6.18□□□□□ -1.42
UBR3-209ENST00000477461 ABHD17CQ6PCB6 329 aa6.18□□□□□ -1.42
UBR3-209ENST00000477461 CXXC5Q7LFL8 322 aaKnown RBP6.18□□□□□ -1.42
UBR3-209ENST00000477461 OVCH1Q7RTY7 1134 aa6.18□□□□□ -1.42
UBR3-209ENST00000477461 FGD2Q7Z6J4 655 aa6.18□□□□□ -1.42
UBR3-209ENST00000477461 IGSF22Q8N9C0 903 aa6.18□□□□□ -1.42
UBR3-209ENST00000477461 TMEM176AQ96HP8 235 aa6.18□□□□□ -1.42
UBR3-209ENST00000477461 OR10A5Q9H207 317 aa6.18□□□□□ -1.42
UBR3-209ENST00000477461 KCNH7Q9NS40 1196 aa6.18□□□□□ -1.42
UBR3-209ENST00000477461 Q9UFV3 132 aa6.18□□□□□ -1.42
UBR3-209ENST00000477461 SLC12A8A0AV02 714 aa6.17□□□□□ -1.42
UBR3-209ENST00000477461 CYR61O00622 381 aa6.17□□□□□ -1.42
UBR3-209ENST00000477461 EFCAB14O75071 495 aa6.17□□□□□ -1.42
UBR3-209ENST00000477461 KRT37O76014 449 aa6.17□□□□□ -1.42
UBR3-209ENST00000477461 MSX2P35548 267 aaPredicted RBP6.17□□□□□ -1.42
UBR3-209ENST00000477461 RBL2Q08999 1139 aa6.17□□□□□ -1.42
UBR3-209ENST00000477461 FOXL1Q12952 345 aa6.17□□□□□ -1.42
UBR3-209ENST00000477461 ACAP1Q15027 740 aa6.17□□□□□ -1.42
UBR3-209ENST00000477461 RNF207Q6ZRF8 634 aa6.17□□□□□ -1.42
UBR3-209ENST00000477461 BRAPQ7Z569 592 aa6.17□□□□□ -1.42
UBR3-209ENST00000477461 ZNF808Q8N4W9 903 aaPredicted RBP6.17□□□□□ -1.42
UBR3-209ENST00000477461 C2orf69Q8N8R5 385 aa6.17□□□□□ -1.42
UBR3-209ENST00000477461 GSTCDQ8NEC7 633 aa6.17□□□□□ -1.42
UBR3-209ENST00000477461 ARMC5Q96C12 935 aa6.17□□□□□ -1.42
UBR3-209ENST00000477461 SFMBT1Q9UHJ3 866 aa6.17□□□□□ -1.42
UBR3-209ENST00000477461 FBXO10Q9UK96 956 aa6.17□□□□□ -1.42
UBR3-209ENST00000477461 KCNA6P17658 529 aa6.16□□□□□ -1.42
UBR3-209ENST00000477461 TRIM68Q6AZZ1 485 aa6.16□□□□□ -1.42
UBR3-209ENST00000477461 GRAMD4Q6IC98 578 aa6.16□□□□□ -1.42
UBR3-209ENST00000477461 POLNQ7Z5Q5 900 aa6.16□□□□□ -1.42
UBR3-209ENST00000477461 C1orf210Q8IVY1 113 aa6.16□□□□□ -1.42
UBR3-209ENST00000477461 CFHR4Q92496 578 aa6.16□□□□□ -1.42
UBR3-209ENST00000477461 EDAQ92838 391 aa6.16□□□□□ -1.42
UBR3-209ENST00000477461 PCED1AQ9H1Q7 454 aa6.16□□□□□ -1.42
UBR3-209ENST00000477461 TCRBV16S1A1N1A0A5B0 115 aa6.15□□□□□ -1.42
UBR3-209ENST00000477461 GOLGA6L22H0YM25 854 aa6.15□□□□□ -1.42
UBR3-209ENST00000477461 HIBADHP31937 336 aaKnown RBP6.15□□□□□ -1.42
UBR3-209ENST00000477461 STAT3P40763 770 aa6.15□□□□□ -1.42
UBR3-209ENST00000477461 DUSP8Q13202 625 aa6.15□□□□□ -1.42
UBR3-209ENST00000477461 NFYCQ13952 458 aa6.15□□□□□ -1.42
UBR3-209ENST00000477461 SGMS1Q86VZ5 419 aa6.15□□□□□ -1.42
UBR3-209ENST00000477461 GPR135Q8IZ08 494 aa6.15□□□□□ -1.42
UBR3-209ENST00000477461 DLG3Q92796 817 aa6.15□□□□□ -1.42
UBR3-209ENST00000477461 ZNF503Q96F45 646 aa6.15□□□□□ -1.42
UBR3-209ENST00000477461 CELF4Q9BZC1 486 aaKnown RBP6.15□□□□□ -1.42
UBR3-209ENST00000477461 OR10A2Q9H208 303 aa6.15□□□□□ -1.42
UBR3-209ENST00000477461 PLA2G3Q9NZ20 509 aa6.15□□□□□ -1.42
UBR3-209ENST00000477461 B3GALT1Q9Y5Z6 326 aa6.15□□□□□ -1.42
UBR3-209ENST00000477461 RAPGEF3O95398 923 aa6.14□□□□□ -1.43
UBR3-209ENST00000477461 C1SP09871 688 aa6.14□□□□□ -1.43
UBR3-209ENST00000477461 IRF9Q00978 393 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms