RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 C5orf60A6NFR6 353 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 BTBD19C9JJ37 291 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 E7EVH7 732 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 MATN2O00339 956 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 PRPF3O43395 683 aaKnown RBP4.49□□□□□ -1.69
CD55-208ENST00000476590 TSPAN6O43657 245 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 KCNJ13O60928 360 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 SERPINB7O75635 380 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 EIF2S1P05198 315 aaKnown RBP4.49□□□□□ -1.69
CD55-208ENST00000476590 PDHA1P08559 390 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 CYP2C9P11712 490 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 CPA3P15088 417 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 PRKACBP22694 351 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 MDH1P40925 334 aaKnown RBP4.49□□□□□ -1.69
CD55-208ENST00000476590 USP14P54578 494 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 POLR2FP61218 127 aaKnown RBP4.49□□□□□ -1.69
CD55-208ENST00000476590 APBA1Q02410 837 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 CTDSPL2Q05D32 466 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 BNIP1Q12981 228 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 IKQ13123 557 aaPredicted RBP4.49□□□□□ -1.69
CD55-208ENST00000476590 C15orf59Q2T9L4 293 aaPredicted RBP4.49□□□□□ -1.69
CD55-208ENST00000476590 ARL13BQ3SXY8 428 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 RASIP1Q5U651 963 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 IL23RQ5VWK5 629 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 C11orf57Q6ZUT1 292 aaPredicted RBP4.49□□□□□ -1.69
CD55-208ENST00000476590 NUDT18Q6ZVK8 323 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 SV2AQ7L0J3 742 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 TAS1R3Q7RTX0 852 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 CACNA2D4Q7Z3S7 1137 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 KRT77Q7Z794 578 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 VPS36Q86VN1 386 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 CCDC83Q8IWF9 413 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 DHX40Q8IX18 779 aaKnown RBP4.49□□□□□ -1.69
CD55-208ENST00000476590 FBF1Q8TES7 1133 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 ATP8B4Q8TF62 1192 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 FRS2Q8WU20 508 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 CDHR1Q96JP9 859 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 FRMD6Q96NE9 622 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 SELENOOQ9BVL4 669 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 SEMA4AQ9H3S1 761 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 KCNMB3Q9NPA1 279 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 GPR108Q9NPR9 543 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 NPDC1Q9NQX5 325 aaPredicted RBP4.49□□□□□ -1.69
CD55-208ENST00000476590 HOMER2Q9NSB8 354 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.49□□□□□ -1.69
CD55-208ENST00000476590 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.49□□□□□ -1.692e-6■■■■□ 20.4
CD55-208ENST00000476590 LARSQ9P2J5 1176 aaKnown RBP4.49□□□□□ -1.69
CD55-208ENST00000476590 CFDP1Q9UEE9 299 aaPredicted RBP4.49□□□□□ -1.69
CD55-208ENST00000476590 ASAP1Q9ULH1 1129 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 GIT1Q9Y2X7 761 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 CPSF1Q10570 1443 aaKnown RBP4.49□□□□□ -1.69
CD55-208ENST00000476590 FAM135BQ49AJ0 1406 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 NRXN1Q9ULB1 1477 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 WDR7Q9Y4E6 1490 aa4.49□□□□□ -1.69
CD55-208ENST00000476590 USP17L3A6NCW0 530 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 USP17L4A6NCW7 530 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 EIF4E1BA6NMX2 242 aaKnown RBP4.48□□□□□ -1.69
CD55-208ENST00000476590 GOLGA8TH3BQL2 631 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 KMOO15229 486 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 ASAP2O43150 1006 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 B4GALT4O60513 344 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 LILRB3O75022 631 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 VAMP4O75379 141 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 ZNF254O75437 659 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 DGKIO75912 1065 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 ASMTLO95671 621 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 KRT18P05783 430 aaKnown RBP4.48□□□□□ -1.69
CD55-208ENST00000476590 GOLGA8HP0CJ92 632 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 PCP11498 1178 aaKnown RBP4.48□□□□□ -1.69
CD55-208ENST00000476590 GSPT1P15170 499 aaKnown RBP4.48□□□□□ -1.69
CD55-208ENST00000476590 ATP5DP30049 168 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 PPP2R1AP30153 589 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 GBP1P32455 592 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 TMED10P49755 219 aaKnown RBP4.48□□□□□ -1.69
CD55-208ENST00000476590 SEC13P55735 322 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 LACTBP83111 547 aaPredicted RBP4.48□□□□□ -1.69
CD55-208ENST00000476590 ATP11AP98196 1134 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 ATP8B2P98198 1209 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 PRKG1Q13976 671 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 DPYSQ14117 519 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 SEPT6Q14141 434 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 COG2Q14746 738 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 SPCS2Q15005 226 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 NFE2L2Q16236 605 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 GPR162Q16538 588 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 NFE2Q16621 373 aaPredicted RBP4.48□□□□□ -1.69
CD55-208ENST00000476590 ANKDD1AQ495B1 522 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 DALRD3Q5D0E6 543 aaKnown RBP4.48□□□□□ -1.69
CD55-208ENST00000476590 TTC22Q5TAA0 569 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 DAB2IPQ5VWQ8 1189 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 LVRNQ6Q4G3 990 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 USP17L2Q6R6M4 530 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 TAOK1Q7L7X3 1001 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 USP17L1Q7RTZ2 530 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 DGLUCYQ7Z3D6 616 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 UBE3BQ7Z3V4 1068 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 RELL1Q8IUW5 271 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 SPICE1Q8N0Z3 855 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 ARFGAP2Q8N6H7 521 aa4.48□□□□□ -1.69
CD55-208ENST00000476590 KIAA1958Q8N8K9 716 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms