RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 CYP4F8P98187 520 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 LRRC32Q14392 662 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 SEC23AQ15436 765 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 PRSS36Q5K4E3 855 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 TMEM240Q5SV17 173 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 BTBD8Q5XKL5 378 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 CCDC70Q6NSX1 233 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 ESRP1Q6NXG1 681 aaKnown RBP5.18□□□□□ -1.58
VPS13D-207ENST00000476169 FRMD7Q6ZUT3 714 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-207ENST00000476169 ZNF354CQ86Y25 554 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 WFDC3Q8IUB2 231 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 CMIPQ8IY22 773 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 ACRBPQ8NEB7 543 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 FLCNQ8NFG4 579 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 PHOSPHO1Q8TCT1 267 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 SEC14L1Q92503 715 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 NMRK2Q9NPI5 230 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 RIC8BQ9NVN3 520 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 MYOTQ9UBF9 498 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 PHTF1Q9UMS5 762 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 INVSQ9Y283 1065 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 BUB1BO60566 1050 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-207ENST00000476169 TADA3O75528 432 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 ASGR2P07307 311 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 HSP90AA1P07900 732 aaKnown RBP5.17□□□□□ -1.58
VPS13D-207ENST00000476169 GLI4P10075 376 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 PTPN1P18031 435 aaKnown RBP5.17□□□□□ -1.58
VPS13D-207ENST00000476169 EPHA5P54756 1037 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 KRT85P78386 507 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 NR0B2Q15466 257 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 ALFQ53S48 1182 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 EFCAB2Q5VUJ9 269 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 SLC23A3Q6PIS1 610 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 SRLQ86TD4 932 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 SKAP1Q86WV1 359 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 TRIM48Q8IWZ4 208 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 TMTC2Q8N394 836 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 NETO2Q8NC67 525 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 LMBR1Q8WVP7 490 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 AIFM3Q96NN9 605 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 TCF7L1Q9HCS4 588 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 NLRC4Q9NPP4 1024 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 MAP3K20Q9NYL2 800 aaKnown RBP5.17□□□□□ -1.58
VPS13D-207ENST00000476169 LUZP4Q9P127 313 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 ASH2LQ9UBL3 628 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 GPR160Q9UJ42 338 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 PALD1Q9ULE6 856 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 DMTF1Q9Y222 760 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 SIT1Q9Y3P8 196 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 TELO2Q9Y4R8 837 aa5.17□□□□□ -1.58
VPS13D-207ENST00000476169 LCHNA4D1U4 455 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 PRAMEF25A6NGN4 478 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 TRIM75PA6NK02 468 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 FAM90A27PA6NNH2 459 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 F5H423 210 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-207ENST00000476169 FOXP2O15409 715 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 SLC26A4O43511 780 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 AP1G1O43747 822 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 PSPNO60542 156 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 CTNND1O60716 968 aaKnown RBP5.16□□□□□ -1.58
VPS13D-207ENST00000476169 H2AFYO75367 372 aaKnown RBP5.16□□□□□ -1.58
VPS13D-207ENST00000476169 EFEMP2O95967 443 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 C4BPAP04003 597 aaKnown RBP5.16□□□□□ -1.58
VPS13D-207ENST00000476169 TMEM253P0C7T8 217 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 MYBP10242 640 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 FUT4P22083 530 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 ARL4AP40617 200 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 FNTBP49356 437 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 SETQ01105 290 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-207ENST00000476169 BIRC3Q13489 604 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 ODF1Q14990 250 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 EPHA7Q15375 998 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 LONRF1Q17RB8 773 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 SLC4A8Q2Y0W8 1093 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 CATSPEREQ5SY80 951 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 KRBA2Q6ZNG9 492 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 CATIPQ7Z7H3 387 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 NLRX1Q86UT6 975 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 FAM186BQ8IYM0 893 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 CMTR2Q8IYT2 770 aaKnown RBP5.16□□□□□ -1.58
VPS13D-207ENST00000476169 FAM9BQ8IZU0 186 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 TEX19Q8NA77 164 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 TGFBRAP1Q8WUH2 860 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 RTF1Q92541 710 aaKnown RBP5.16□□□□□ -1.58
VPS13D-207ENST00000476169 GJA10Q969M2 543 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 ACAP3Q96P50 834 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 HERPUD2Q9BSE4 406 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 SEMA6BQ9H3T3 888 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 AS3MTQ9HBK9 375 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 C1orf112Q9NSG2 853 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 CCM2LQ9NUG4 571 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-207ENST00000476169 CCDC39Q9UFE4 941 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 MSRAQ9UJ68 235 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 NUDT5Q9UKK9 219 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 ANGEL1Q9UNK9 670 aaKnown RBP5.16□□□□□ -1.58
VPS13D-207ENST00000476169 GTF2A1LQ9UNN4 478 aa5.16□□□□□ -1.58
VPS13D-207ENST00000476169 MORC2Q9Y6X9 1032 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-207ENST00000476169 TCRBV5S2A0A599 114 aa5.15□□□□□ -1.59
VPS13D-207ENST00000476169 KLHL33A6NCF5 533 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms