RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 MGEA5O60502 916 aa23.34■■□□□ 1.33
VPS36-203ENST00000475375 SRGAP2BP0DMP2 458 aa23.34■■□□□ 1.33
VPS36-203ENST00000475375 ARP10275 920 aa23.34■■□□□ 1.33
VPS36-203ENST00000475375 SIGLEC14Q08ET2 396 aa23.34■■□□□ 1.33
VPS36-203ENST00000475375 ODR4Q5SWX8 454 aa23.34■■□□□ 1.33
VPS36-203ENST00000475375 PGBD1Q96JS3 809 aa23.34■■□□□ 1.33
VPS36-203ENST00000475375 ERVK-5Q9HDB9 667 aa23.34■■□□□ 1.33
VPS36-203ENST00000475375 C1orf112Q9NSG2 853 aa23.34■■□□□ 1.33
VPS36-203ENST00000475375 LOXHD1Q8IVV2 1947 aa23.33■■□□□ 1.33
VPS36-203ENST00000475375 PLXNA4Q9HCM2 1894 aa23.33■■□□□ 1.33
VPS36-203ENST00000475375 SLC26A2P50443 739 aa23.33■■□□□ 1.33
VPS36-203ENST00000475375 FAM102BQ5T8I3 360 aa23.33■■□□□ 1.33
VPS36-203ENST00000475375 FAM160B1Q5W0V3 765 aa23.33■■□□□ 1.33
VPS36-203ENST00000475375 TMTC3Q6ZXV5 915 aa23.33■■□□□ 1.33
VPS36-203ENST00000475375 SLC24A5Q71RS6 500 aa23.33■■□□□ 1.33
VPS36-203ENST00000475375 ZBTB33Q86T24 672 aa23.33■■□□□ 1.33
VPS36-203ENST00000475375 MICU3Q86XE3 530 aa23.33■■□□□ 1.33
VPS36-203ENST00000475375 COLGALT1Q8NBJ5 622 aa23.33■■□□□ 1.33
VPS36-203ENST00000475375 VN1R2Q8NFZ6 395 aa23.33■■□□□ 1.33
VPS36-203ENST00000475375 PPP1R16BQ96T49 567 aa23.33■■□□□ 1.33
VPS36-203ENST00000475375 CDCA3Q99618 268 aaPredicted RBP23.33■■□□□ 1.33
VPS36-203ENST00000475375 TYW1Q9NV66 732 aaKnown RBP23.33■■□□□ 1.33
VPS36-203ENST00000475375 HCSTQ9UBK5 93 aa23.33■■□□□ 1.33
VPS36-203ENST00000475375 ST3GAL5Q9UNP4 418 aa23.33■■□□□ 1.33
VPS36-203ENST00000475375 ATF7P17544 494 aaPredicted RBP23.32■■□□□ 1.32
VPS36-203ENST00000475375 NAPAP54920 295 aa23.32■■□□□ 1.32
VPS36-203ENST00000475375 ERVFC1P60507 584 aa23.32■■□□□ 1.32
VPS36-203ENST00000475375 TCF15Q12870 199 aa23.32■■□□□ 1.32
VPS36-203ENST00000475375 ITGB3BPQ13352 177 aaPredicted RBP23.32■■□□□ 1.32
VPS36-203ENST00000475375 DUSP6Q16828 381 aa23.32■■□□□ 1.32
VPS36-203ENST00000475375 CEP55Q53EZ4 464 aa23.32■■□□□ 1.32
VPS36-203ENST00000475375 PLPP4Q5VZY2 271 aa23.32■■□□□ 1.32
VPS36-203ENST00000475375 FANCBQ8NB91 859 aa23.32■■□□□ 1.32
VPS36-203ENST00000475375 ATP8B4Q8TF62 1192 aa23.32■■□□□ 1.32
VPS36-203ENST00000475375 LRRC2Q9BYS8 371 aa23.32■■□□□ 1.32
VPS36-203ENST00000475375 CDHR5Q9HBB8 845 aa23.32■■□□□ 1.32
VPS36-203ENST00000475375 ATP6V0A4Q9HBG4 840 aa23.32■■□□□ 1.32
VPS36-203ENST00000475375 AGO4Q9HCK5 861 aaKnown RBP23.32■■□□□ 1.32
VPS36-203ENST00000475375 RGS18Q9NS28 235 aa23.32■■□□□ 1.32
VPS36-203ENST00000475375 USP34Q70CQ2 3546 aa23.32■■□□□ 1.32
VPS36-203ENST00000475375 GPR182O15218 404 aa23.31■■□□□ 1.32
VPS36-203ENST00000475375 HBP1O60381 514 aa23.31■■□□□ 1.32
VPS36-203ENST00000475375 ZNF76P36508 570 aa23.31■■□□□ 1.32
VPS36-203ENST00000475375 TECP42680 631 aa23.31■■□□□ 1.32
VPS36-203ENST00000475375 LIFRP42702 1097 aa23.31■■□□□ 1.32
VPS36-203ENST00000475375 APOBRQ0VD83 1088 aa23.31■■□□□ 1.32
VPS36-203ENST00000475375 WWC2Q6AWC2 1192 aa23.31■■□□□ 1.32
VPS36-203ENST00000475375 PDE12Q6L8Q7 609 aaKnown RBP23.31■■□□□ 1.32
VPS36-203ENST00000475375 KIAA0319LQ8IZA0 1049 aa23.31■■□□□ 1.32
VPS36-203ENST00000475375 TMEM40Q8WWA1 233 aa23.31■■□□□ 1.32
VPS36-203ENST00000475375 SUSD6Q92537 303 aa23.31■■□□□ 1.32
VPS36-203ENST00000475375 APOL5Q9BWW9 433 aa23.31■■□□□ 1.32
VPS36-203ENST00000475375 FAM86C1Q9NVL1 165 aa23.31■■□□□ 1.32
VPS36-203ENST00000475375 ST18O60284 1047 aa23.3■■□□□ 1.32
VPS36-203ENST00000475375 FGFR1P11362 822 aa23.3■■□□□ 1.32
VPS36-203ENST00000475375 LAG3P18627 525 aa23.3■■□□□ 1.32
VPS36-203ENST00000475375 SP100P23497 879 aaPredicted RBP23.3■■□□□ 1.32
VPS36-203ENST00000475375 ADCY7P51828 1080 aa23.3■■□□□ 1.32
VPS36-203ENST00000475375 LLGL2Q6P1M3 1020 aa23.3■■□□□ 1.32
VPS36-203ENST00000475375 PDXDC2PQ6P474 469 aa23.3■■□□□ 1.32
VPS36-203ENST00000475375 SYNE3Q6ZMZ3 975 aa23.3■■□□□ 1.32
VPS36-203ENST00000475375 ANO3Q9BYT9 981 aa23.3■■□□□ 1.32
VPS36-203ENST00000475375 RIC8AQ9NPQ8 531 aa23.3■■□□□ 1.32
VPS36-203ENST00000475375 ENTPD7Q9NQZ7 604 aa23.3■■□□□ 1.32
VPS36-203ENST00000475375 PUF60Q9UHX1 559 aaKnown RBP23.3■■□□□ 1.32
VPS36-203ENST00000475375 C9IYK1 514 aa23.29■■□□□ 1.32
VPS36-203ENST00000475375 ATG7O95352 703 aa23.29■■□□□ 1.32
VPS36-203ENST00000475375 FOSP01100 380 aaPredicted RBP23.29■■□□□ 1.32
VPS36-203ENST00000475375 VCPP55072 806 aaKnown RBP23.29■■□□□ 1.32
VPS36-203ENST00000475375 PTPN21Q16825 1174 aa23.29■■□□□ 1.32
VPS36-203ENST00000475375 KIZQ2M2Z5 673 aa23.29■■□□□ 1.32
VPS36-203ENST00000475375 FAM43BQ6ZT52 329 aaPredicted RBP23.29■■□□□ 1.32
VPS36-203ENST00000475375 CKAP2LQ8IYA6 745 aa23.29■■□□□ 1.32
VPS36-203ENST00000475375 OSMRQ99650 979 aa23.29■■□□□ 1.32
VPS36-203ENST00000475375 ZNF302Q9NR11 478 aa23.29■■□□□ 1.32
VPS36-203ENST00000475375 FSCN2O14926 492 aa23.28■■□□□ 1.32
VPS36-203ENST00000475375 CCNE2O96020 404 aa23.28■■□□□ 1.32
VPS36-203ENST00000475375 COL9A3Q14050 684 aaPredicted RBP23.28■■□□□ 1.32
VPS36-203ENST00000475375 ZNF484Q5JVG2 852 aa23.28■■□□□ 1.32
VPS36-203ENST00000475375 ANKRD54Q6NXT1 300 aa23.28■■□□□ 1.32
VPS36-203ENST00000475375 ABHD15Q6UXT9 468 aa23.28■■□□□ 1.32
VPS36-203ENST00000475375 TRMT1LQ7Z2T5 733 aaKnown RBP23.28■■□□□ 1.32
VPS36-203ENST00000475375 METTL13Q8N6R0 699 aa23.28■■□□□ 1.32
VPS36-203ENST00000475375 ASIC4Q96FT7 647 aa23.28■■□□□ 1.32
VPS36-203ENST00000475375 YTHDC1Q96MU7 727 aaKnown RBP23.28■■□□□ 1.32
VPS36-203ENST00000475375 TCF25Q9BQ70 676 aa23.28■■□□□ 1.32
VPS36-203ENST00000475375 TSHZ2Q9NRE2 1034 aa23.28■■□□□ 1.32
VPS36-203ENST00000475375 TMEM161AQ9NX61 479 aa23.28■■□□□ 1.32
VPS36-203ENST00000475375 COL1A2P08123 1366 aa23.27■■□□□ 1.32
VPS36-203ENST00000475375 IGKV6D-21A0A0A0MT36 114 aa23.27■■□□□ 1.32
VPS36-203ENST00000475375 MEIS1O00470 390 aa23.27■■□□□ 1.32
VPS36-203ENST00000475375 SLC27A2O14975 620 aa23.27■■□□□ 1.32
VPS36-203ENST00000475375 GFRA3O60609 400 aa23.27■■□□□ 1.32
VPS36-203ENST00000475375 AVPR2P30518 371 aa23.27■■□□□ 1.32
VPS36-203ENST00000475375 CRYBB1P53674 252 aaPredicted RBP23.27■■□□□ 1.32
VPS36-203ENST00000475375 SWSAP1Q6NVH7 229 aa23.27■■□□□ 1.32
VPS36-203ENST00000475375 PPP1R18Q6NYC8 613 aa23.27■■□□□ 1.32
VPS36-203ENST00000475375 MIS18BP1Q6P0N0 1132 aa23.27■■□□□ 1.32
VPS36-203ENST00000475375 FAM228AQ86W67 206 aa23.27■■□□□ 1.32
VPS36-203ENST00000475375 CCDC60Q8IWA6 550 aaPredicted RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms