RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 FAM184BQ9ULE4 1060 aa5.51□□□□□ -1.53
TMEM50B-208ENST00000474272 TRBV23-1A0A0A0MS06 115 aa5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 CCDC66A2RUB6 948 aa5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 ZNF561-AS1K7EIQ3 104 aa5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 AQP7O14520 342 aa5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 WNT9AO14904 365 aa5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 MMEP08473 750 aa5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 TGM1P22735 817 aa5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 MCM7P33993 719 aa5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 GTF2F1P35269 517 aaKnown RBP eCLIP5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 STAT5BP51692 787 aa5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 ACAP1Q15027 740 aa5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 EIF4HQ15056 248 aaKnown RBP5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 CRY1Q16526 586 aa5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 TM4SF20Q53R12 229 aa5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 FIGNQ5HY92 759 aa5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 C16orf59Q7L2K0 433 aa5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 DPH6Q7L8W6 267 aa5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 SGMS1Q86VZ5 419 aa5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 CISD2Q8N5K1 135 aaKnown RBP5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 CACTINQ8WUQ7 758 aaKnown RBP5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 UBXN4Q92575 508 aa5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 ARMC5Q96C12 935 aa5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 WNK4Q96J92 1243 aa5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 TRIM55Q9BYV6 548 aa5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 MMRN2Q9H8L6 949 aa5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 AGO3Q9H9G7 860 aaKnown RBP5.5□□□□□ -1.53
TMEM50B-208ENST00000474272 ARVCFO00192 962 aa5.49□□□□□ -1.53
TMEM50B-208ENST00000474272 SCDO00767 359 aa5.49□□□□□ -1.53
TMEM50B-208ENST00000474272 DIAPH1O60610 1272 aaKnown RBP5.49□□□□□ -1.53
TMEM50B-208ENST00000474272 CRTAMO95727 393 aa5.49□□□□□ -1.53
TMEM50B-208ENST00000474272 ACRV1P26436 265 aa5.49□□□□□ -1.53
TMEM50B-208ENST00000474272 GJA4P35212 333 aa5.49□□□□□ -1.53
TMEM50B-208ENST00000474272 STAT3P40763 770 aa5.49□□□□□ -1.53
TMEM50B-208ENST00000474272 ECE1P42892 770 aa5.49□□□□□ -1.53
TMEM50B-208ENST00000474272 KRTAP1-1Q07627 177 aa5.49□□□□□ -1.53
TMEM50B-208ENST00000474272 GRM7Q14831 915 aa5.49□□□□□ -1.53
TMEM50B-208ENST00000474272 STILQ15468 1287 aa5.49□□□□□ -1.53
TMEM50B-208ENST00000474272 TRIM68Q6AZZ1 485 aa5.49□□□□□ -1.53
TMEM50B-208ENST00000474272 MAMDC2Q7Z304 686 aaPredicted RBP5.49□□□□□ -1.53
TMEM50B-208ENST00000474272 RTKN2Q8IZC4 609 aa5.49□□□□□ -1.53
TMEM50B-208ENST00000474272 DNAJC2Q99543 621 aaKnown RBP5.49□□□□□ -1.53
TMEM50B-208ENST00000474272 BTBD2Q9BX70 525 aa5.49□□□□□ -1.53
TMEM50B-208ENST00000474272 WDR33Q9C0J8 1336 aaKnown RBP5.48□□□□□ -1.53
TMEM50B-208ENST00000474272 A0A0G2JNJ9 132 aa5.48□□□□□ -1.53
TMEM50B-208ENST00000474272 FAM153BP0C7A2 387 aa5.48□□□□□ -1.53
TMEM50B-208ENST00000474272 RPS19P39019 145 aaKnown RBP5.48□□□□□ -1.53
TMEM50B-208ENST00000474272 MEOX1P50221 254 aa5.48□□□□□ -1.53
TMEM50B-208ENST00000474272 DPTQ07507 201 aa5.48□□□□□ -1.53
TMEM50B-208ENST00000474272 MOGSQ13724 837 aa5.48□□□□□ -1.53
TMEM50B-208ENST00000474272 TUBA3CQ13748 450 aa5.48□□□□□ -1.53
TMEM50B-208ENST00000474272 MTERF2Q49AM1 385 aa5.48□□□□□ -1.53
TMEM50B-208ENST00000474272 KANK2Q63ZY3 851 aa5.48□□□□□ -1.53
TMEM50B-208ENST00000474272 SPTY2D1Q68D10 685 aaPredicted RBP5.48□□□□□ -1.53
TMEM50B-208ENST00000474272 TUBA3EQ6PEY2 450 aa5.48□□□□□ -1.53
TMEM50B-208ENST00000474272 CXXC5Q7LFL8 322 aaKnown RBP5.48□□□□□ -1.53
TMEM50B-208ENST00000474272 ZC3H7AQ8IWR0 971 aaKnown RBP5.48□□□□□ -1.53
TMEM50B-208ENST00000474272 WDR48Q8TAF3 677 aa5.48□□□□□ -1.53
TMEM50B-208ENST00000474272 EXOC2Q96KP1 924 aa5.48□□□□□ -1.53
TMEM50B-208ENST00000474272 OR10A2Q9H208 303 aa5.48□□□□□ -1.53
TMEM50B-208ENST00000474272 Q9UFV3 132 aa5.48□□□□□ -1.53
TMEM50B-208ENST00000474272 PRAMEF22A3QJZ6 481 aa5.47□□□□□ -1.53
TMEM50B-208ENST00000474272 PDPK1O15530 556 aa5.47□□□□□ -1.53
TMEM50B-208ENST00000474272 STK10O94804 968 aaKnown RBP5.47□□□□□ -1.53
TMEM50B-208ENST00000474272 SSRP1Q08945 709 aaKnown RBP5.47□□□□□ -1.53
TMEM50B-208ENST00000474272 SMN1Q16637 294 aaKnown RBP5.47□□□□□ -1.53
TMEM50B-208ENST00000474272 D2HGDHQ8N465 521 aa5.47□□□□□ -1.53
TMEM50B-208ENST00000474272 ZBTB38Q8NAP3 1195 aaPredicted RBP5.47□□□□□ -1.53
TMEM50B-208ENST00000474272 LARP4BQ92615 738 aaKnown RBP5.47□□□□□ -1.53
TMEM50B-208ENST00000474272 OR10A5Q9H207 317 aa5.47□□□□□ -1.53
TMEM50B-208ENST00000474272 SLC2A4RGQ9NR83 387 aa5.47□□□□□ -1.53
TMEM50B-208ENST00000474272 MAGEL2Q9UJ55 1249 aa5.47□□□□□ -1.53
TMEM50B-208ENST00000474272 FBXO10Q9UK96 956 aa5.47□□□□□ -1.53
TMEM50B-208ENST00000474272 COQ6Q9Y2Z9 468 aa5.47□□□□□ -1.53
TMEM50B-208ENST00000474272 A0A087X1B8 175 aa5.46□□□□□ -1.54
TMEM50B-208ENST00000474272 RASSF10A6NK89 507 aa5.46□□□□□ -1.54
TMEM50B-208ENST00000474272 U2SURPO15042 1029 aaKnown RBP5.46□□□□□ -1.54
TMEM50B-208ENST00000474272 CLASP2O75122 1294 aaKnown RBP5.46□□□□□ -1.54
TMEM50B-208ENST00000474272 HERVK_113P62684 666 aa5.46□□□□□ -1.54
TMEM50B-208ENST00000474272 SUMO1P63165 101 aaKnown RBP5.46□□□□□ -1.54
TMEM50B-208ENST00000474272 HGFACQ04756 655 aa5.46□□□□□ -1.54
TMEM50B-208ENST00000474272 ZNF627Q7L945 461 aa5.46□□□□□ -1.54
TMEM50B-208ENST00000474272 HIPK4Q8NE63 616 aa5.46□□□□□ -1.54
TMEM50B-208ENST00000474272 SHCBP1Q8NEM2 672 aa5.46□□□□□ -1.54
TMEM50B-208ENST00000474272 ASB15Q8WXK1 588 aa5.46□□□□□ -1.54
TMEM50B-208ENST00000474272 IPO9Q96P70 1041 aaKnown RBP5.46□□□□□ -1.54
TMEM50B-208ENST00000474272 GBP4Q96PP9 640 aa5.46□□□□□ -1.54
TMEM50B-208ENST00000474272 CEP72Q9P209 647 aa5.46□□□□□ -1.54
TMEM50B-208ENST00000474272 REXO2Q9Y3B8 237 aaKnown RBP5.46□□□□□ -1.54
TMEM50B-208ENST00000474272 MSRB2Q9Y3D2 182 aa5.46□□□□□ -1.54
TMEM50B-208ENST00000474272 CAPN14A8MX76 684 aa5.45□□□□□ -1.54
TMEM50B-208ENST00000474272 INHBEP58166 350 aa5.45□□□□□ -1.54
TMEM50B-208ENST00000474272 LACTBP83111 547 aaPredicted RBP5.45□□□□□ -1.54
TMEM50B-208ENST00000474272 RBL2Q08999 1139 aa5.45□□□□□ -1.54
TMEM50B-208ENST00000474272 ADAM15Q13444 863 aa5.45□□□□□ -1.54
TMEM50B-208ENST00000474272 SAFB2Q14151 953 aaKnown RBP eCLIP5.45□□□□□ -1.54
TMEM50B-208ENST00000474272 FAM47CQ5HY64 1035 aa5.45□□□□□ -1.54
TMEM50B-208ENST00000474272 TMEM200BQ69YZ2 307 aa5.45□□□□□ -1.54
TMEM50B-208ENST00000474272 GRAMD4Q6IC98 578 aa5.45□□□□□ -1.54
TMEM50B-208ENST00000474272 NOSTRINQ8IVI9 506 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms