RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 EYSQ5T1H1 3165 aa12.62□□□□□ -0.39
CKS1B-206ENST00000474215 IGSF9BQ9UPX0 1349 aa12.62□□□□□ -0.39
CKS1B-206ENST00000474215 GBF1Q92538 1859 aa12.61□□□□□ -0.39
CKS1B-206ENST00000474215 KAT6AQ92794 2004 aa12.61□□□□□ -0.39
CKS1B-206ENST00000474215 RFXAPO00287 272 aa12.61□□□□□ -0.39
CKS1B-206ENST00000474215 ENPP3O14638 875 aa12.61□□□□□ -0.39
CKS1B-206ENST00000474215 SLC37A4O43826 429 aa12.61□□□□□ -0.39
CKS1B-206ENST00000474215 ZNF862O60290 1169 aa12.61□□□□□ -0.39
CKS1B-206ENST00000474215 CCNT1O60563 726 aaKnown RBP12.61□□□□□ -0.39
CKS1B-206ENST00000474215 UPP2O95045 317 aa12.61□□□□□ -0.39
CKS1B-206ENST00000474215 C22orf31O95567 290 aa12.61□□□□□ -0.39
CKS1B-206ENST00000474215 OATP04181 439 aa12.61□□□□□ -0.39
CKS1B-206ENST00000474215 CD52P31358 61 aa12.61□□□□□ -0.39
CKS1B-206ENST00000474215 KRT2P35908 639 aa12.61□□□□□ -0.39
CKS1B-206ENST00000474215 RBM25P49756 843 aaKnown RBP12.61□□□□□ -0.39
CKS1B-206ENST00000474215 NR5A1Q13285 461 aa12.61□□□□□ -0.39
CKS1B-206ENST00000474215 TRIM29Q14134 588 aa12.61□□□□□ -0.39
CKS1B-206ENST00000474215 EARS2Q5JPH6 523 aaKnown RBP12.61□□□□□ -0.39
CKS1B-206ENST00000474215 MIER3Q7Z3K6 550 aa12.61□□□□□ -0.39
CKS1B-206ENST00000474215 TNFRSF25Q93038 417 aa12.61□□□□□ -0.39
CKS1B-206ENST00000474215 ZSCAN31Q96LW9 406 aaPredicted RBP12.61□□□□□ -0.39
CKS1B-206ENST00000474215 CDH23Q9H251 3354 aa12.61□□□□□ -0.39
CKS1B-206ENST00000474215 KDM3AQ9Y4C1 1321 aa12.61□□□□□ -0.39
CKS1B-206ENST00000474215 PRUNE2Q8WUY3 3088 aa12.6□□□□□ -0.39
CKS1B-206ENST00000474215 LINC01553A4QN01 128 aa12.6□□□□□ -0.39
CKS1B-206ENST00000474215 EPOPA6NHQ4 379 aa12.6□□□□□ -0.39
CKS1B-206ENST00000474215 TBX3O15119 743 aa12.6□□□□□ -0.39
CKS1B-206ENST00000474215 MAGEB2O15479 319 aa12.6□□□□□ -0.39
CKS1B-206ENST00000474215 MMP1P03956 469 aa12.6□□□□□ -0.39
CKS1B-206ENST00000474215 POU3F3P20264 500 aaPredicted RBP12.6□□□□□ -0.39
CKS1B-206ENST00000474215 ERVK-21P61565 698 aa12.6□□□□□ -0.39
CKS1B-206ENST00000474215 PRKCEQ02156 737 aa12.6□□□□□ -0.39
CKS1B-206ENST00000474215 ST3GAL1Q11201 340 aa12.6□□□□□ -0.39
CKS1B-206ENST00000474215 UGCGQ16739 394 aa12.6□□□□□ -0.39
CKS1B-206ENST00000474215 KRT40Q6A162 431 aa12.6□□□□□ -0.39
CKS1B-206ENST00000474215 METTL13Q8N6R0 699 aa12.6□□□□□ -0.39
CKS1B-206ENST00000474215 PPM1EQ8WY54 764 aa12.6□□□□□ -0.39
CKS1B-206ENST00000474215 TGS1Q96RS0 853 aaKnown RBP12.6□□□□□ -0.39
CKS1B-206ENST00000474215 LLPHQ9BRT6 129 aaKnown RBP12.6□□□□□ -0.39
CKS1B-206ENST00000474215 CDHR5Q9HBB8 845 aa12.6□□□□□ -0.39
CKS1B-206ENST00000474215 KCNMB3Q9NPA1 279 aa12.6□□□□□ -0.39
CKS1B-206ENST00000474215 PADI3Q9ULW8 664 aa12.6□□□□□ -0.39
CKS1B-206ENST00000474215 FAM205CA6NFA0 338 aa12.59□□□□□ -0.39
CKS1B-206ENST00000474215 BTBD18B2RXH4 712 aa12.59□□□□□ -0.39
CKS1B-206ENST00000474215 MARCH6O60337 910 aa12.59□□□□□ -0.39
CKS1B-206ENST00000474215 TMOD1P28289 359 aa12.59□□□□□ -0.39
CKS1B-206ENST00000474215 PAK2Q13177 524 aa12.59□□□□□ -0.39
CKS1B-206ENST00000474215 CCDC85BQ15834 202 aaPredicted RBP12.59□□□□□ -0.39
CKS1B-206ENST00000474215 XKR3Q5GH77 459 aa12.59□□□□□ -0.39
CKS1B-206ENST00000474215 EFCAB12Q6NXP0 572 aa12.59□□□□□ -0.39
CKS1B-206ENST00000474215 FAM43BQ6ZT52 329 aaPredicted RBP12.59□□□□□ -0.39
CKS1B-206ENST00000474215 SPRED2Q7Z698 418 aa12.59□□□□□ -0.39
CKS1B-206ENST00000474215 RTN4RL1Q86UN2 441 aaPredicted RBP12.59□□□□□ -0.39
CKS1B-206ENST00000474215 CCDC83Q8IWF9 413 aa12.59□□□□□ -0.39
CKS1B-206ENST00000474215 DIS3L2Q8IYB7 885 aaKnown RBP12.59□□□□□ -0.39
CKS1B-206ENST00000474215 SP7Q8TDD2 431 aaPredicted RBP12.59□□□□□ -0.39
CKS1B-206ENST00000474215 HAS1Q92839 578 aa12.59□□□□□ -0.39
CKS1B-206ENST00000474215 YME1L1Q96TA2 773 aa12.59□□□□□ -0.39
CKS1B-206ENST00000474215 FTHL17Q9BXU8 183 aa12.59□□□□□ -0.39
CKS1B-206ENST00000474215 NIFKQ9BYG3 293 aaKnown RBP12.59□□□□□ -0.39
CKS1B-206ENST00000474215 SH2B1Q9NRF2 756 aaPredicted RBP12.59□□□□□ -0.39
CKS1B-206ENST00000474215 VAV3Q9UKW4 847 aa12.59□□□□□ -0.39
CKS1B-206ENST00000474215 GINS2Q9Y248 185 aa12.59□□□□□ -0.39
CKS1B-206ENST00000474215 DDX11L8A8MPP1 907 aa12.58□□□□□ -0.4
CKS1B-206ENST00000474215 EML1O00423 815 aa12.58□□□□□ -0.4
CKS1B-206ENST00000474215 GTPBP6O43824 516 aaPredicted RBP12.58□□□□□ -0.4
CKS1B-206ENST00000474215 STBD1O95210 358 aa12.58□□□□□ -0.4
CKS1B-206ENST00000474215 BAG4O95429 457 aaKnown RBP12.58□□□□□ -0.4
CKS1B-206ENST00000474215 VTNP04004 478 aa12.58□□□□□ -0.4
CKS1B-206ENST00000474215 FOSBP53539 338 aa12.58□□□□□ -0.4
CKS1B-206ENST00000474215 CRYBB1P53674 252 aaPredicted RBP12.58□□□□□ -0.4
CKS1B-206ENST00000474215 PSMC5P62195 406 aa12.58□□□□□ -0.4
CKS1B-206ENST00000474215 NFX1Q12986 1120 aaKnown RBP12.58□□□□□ -0.4
CKS1B-206ENST00000474215 GRB10Q13322 594 aa12.58□□□□□ -0.4
CKS1B-206ENST00000474215 PPP2R5CQ13362 524 aa12.58□□□□□ -0.4
CKS1B-206ENST00000474215 TARBP2Q15633 366 aaKnown RBP12.58□□□□□ -0.4
CKS1B-206ENST00000474215 KIZQ2M2Z5 673 aa12.58□□□□□ -0.4
CKS1B-206ENST00000474215 TMEM266Q2M3C6 531 aa12.58□□□□□ -0.4
CKS1B-206ENST00000474215 ZNF710Q8N1W2 664 aa12.58□□□□□ -0.4
CKS1B-206ENST00000474215 SUGCTQ9HAC7 445 aa12.58□□□□□ -0.4
CKS1B-206ENST00000474215 MTUS1Q9ULD2 1270 aa12.58□□□□□ -0.4
CKS1B-206ENST00000474215 NOC2LQ9Y3T9 749 aaKnown RBP12.58□□□□□ -0.4
CKS1B-206ENST00000474215 MTCH2Q9Y6C9 303 aa12.58□□□□□ -0.4
CKS1B-206ENST00000474215 PTPRSQ13332 1948 aa12.58□□□□□ -0.4
CKS1B-206ENST00000474215 UNC80Q8N2C7 3258 aa12.57□□□□□ -0.4
CKS1B-206ENST00000474215 GPR32O75388 356 aa12.57□□□□□ -0.4
CKS1B-206ENST00000474215 RPS6KA5O75582 802 aa12.57□□□□□ -0.4
CKS1B-206ENST00000474215 QARSP47897 775 aaKnown RBP12.57□□□□□ -0.4
CKS1B-206ENST00000474215 CLCN3P51790 818 aa12.57□□□□□ -0.4
CKS1B-206ENST00000474215 TBC1D8BQ0IIM8 1120 aa12.57□□□□□ -0.4
CKS1B-206ENST00000474215 RABEP1Q15276 862 aa12.57□□□□□ -0.4
CKS1B-206ENST00000474215 SAFBQ15424 915 aaKnown RBP eCLIP12.57□□□□□ -0.4
CKS1B-206ENST00000474215 ODR4Q5SWX8 454 aa12.57□□□□□ -0.4
CKS1B-206ENST00000474215 SLFN12Q8IYM2 578 aa12.57□□□□□ -0.4
CKS1B-206ENST00000474215 LRRC71Q8N4P6 559 aa12.57□□□□□ -0.4
CKS1B-206ENST00000474215 LINC01465Q8N7H1 131 aa12.57□□□□□ -0.4
CKS1B-206ENST00000474215 BANK1Q8NDB2 785 aa12.57□□□□□ -0.4
CKS1B-206ENST00000474215 IL27Q8NEV9 243 aa12.57□□□□□ -0.4
CKS1B-206ENST00000474215 TMEM40Q8WWA1 233 aa12.57□□□□□ -0.4
CKS1B-206ENST00000474215 LINC01599Q8WXQ3 324 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms