RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 COL4A6Q14031 1691 aa23.06■■□□□ 1.28
SNX13-206ENST00000474067 LINC01553A4QN01 128 aa23.05■■□□□ 1.28
SNX13-206ENST00000474067 CTDNEP1O95476 244 aa23.05■■□□□ 1.28
SNX13-206ENST00000474067 PRKCEQ02156 737 aa23.05■■□□□ 1.28
SNX13-206ENST00000474067 TCTN1Q2MV58 587 aa23.05■■□□□ 1.28
SNX13-206ENST00000474067 XKR3Q5GH77 459 aa23.05■■□□□ 1.28
SNX13-206ENST00000474067 ETNPPLQ8TBG4 499 aa23.05■■□□□ 1.28
SNX13-206ENST00000474067 SP7Q8TDD2 431 aaPredicted RBP23.05■■□□□ 1.28
SNX13-206ENST00000474067 UNC45AQ9H3U1 944 aa23.05■■□□□ 1.28
SNX13-206ENST00000474067 PPME1Q9Y570 386 aa23.05■■□□□ 1.28
SNX13-206ENST00000474067 UPP2O95045 317 aa23.04■■□□□ 1.28
SNX13-206ENST00000474067 C22orf31O95567 290 aa23.04■■□□□ 1.28
SNX13-206ENST00000474067 MMP1P03956 469 aa23.04■■□□□ 1.28
SNX13-206ENST00000474067 DNM2P50570 870 aa23.04■■□□□ 1.28
SNX13-206ENST00000474067 CRYBB1P53674 252 aaPredicted RBP23.04■■□□□ 1.28
SNX13-206ENST00000474067 TBC1D8BQ0IIM8 1120 aa23.04■■□□□ 1.28
SNX13-206ENST00000474067 AAK1Q2M2I8 961 aa23.04■■□□□ 1.28
SNX13-206ENST00000474067 UIMC1Q96RL1 719 aa23.04■■□□□ 1.28
SNX13-206ENST00000474067 KIF3AQ9Y496 699 aa23.04■■□□□ 1.28
SNX13-206ENST00000474067 LAMA2P24043 3122 aaKnown RBP23.04■■□□□ 1.28
SNX13-206ENST00000474067 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.03■■□□□ 1.28
SNX13-206ENST00000474067 ST18O60284 1047 aa23.03■■□□□ 1.28
SNX13-206ENST00000474067 RPS6KA5O75582 802 aa23.03■■□□□ 1.28
SNX13-206ENST00000474067 SEC24BO95487 1268 aa23.03■■□□□ 1.28
SNX13-206ENST00000474067 ATP4AP20648 1035 aa23.03■■□□□ 1.28
SNX13-206ENST00000474067 CD52P31358 61 aa23.03■■□□□ 1.28
SNX13-206ENST00000474067 PSMC5P62195 406 aa23.03■■□□□ 1.28
SNX13-206ENST00000474067 TMEM62Q0P6H9 643 aa23.03■■□□□ 1.28
SNX13-206ENST00000474067 PPP2R5CQ13362 524 aa23.03■■□□□ 1.28
SNX13-206ENST00000474067 ADGRE1Q14246 886 aa23.03■■□□□ 1.28
SNX13-206ENST00000474067 PTPROQ16827 1216 aa23.03■■□□□ 1.28
SNX13-206ENST00000474067 KIAA0319LQ8IZA0 1049 aa23.03■■□□□ 1.28
SNX13-206ENST00000474067 ATXN2LQ8WWM7 1075 aaKnown RBP23.03■■□□□ 1.28
SNX13-206ENST00000474067 PPM1EQ8WY54 764 aa23.03■■□□□ 1.28
SNX13-206ENST00000474067 CERS4Q9HA82 394 aa23.03■■□□□ 1.28
SNX13-206ENST00000474067 C1orf112Q9NSG2 853 aa23.03■■□□□ 1.28
SNX13-206ENST00000474067 THEGQ9P2T0 379 aa23.03■■□□□ 1.28
SNX13-206ENST00000474067 PADI3Q9ULW8 664 aa23.03■■□□□ 1.28
SNX13-206ENST00000474067 AKT3Q9Y243 479 aa23.03■■□□□ 1.28
SNX13-206ENST00000474067 GINS2Q9Y248 185 aa23.03■■□□□ 1.28
SNX13-206ENST00000474067 PTPRSQ13332 1948 aa23.03■■□□□ 1.28
SNX13-206ENST00000474067 ENPP3O14638 875 aa23.02■■□□□ 1.28
SNX13-206ENST00000474067 C8orf34Q49A92 452 aa23.02■■□□□ 1.28
SNX13-206ENST00000474067 EFCAB12Q6NXP0 572 aa23.02■■□□□ 1.28
SNX13-206ENST00000474067 TRMT1LQ7Z2T5 733 aaKnown RBP23.02■■□□□ 1.28
SNX13-206ENST00000474067 TMCO2Q7Z6W1 182 aaPredicted RBP23.02■■□□□ 1.28
SNX13-206ENST00000474067 NPAS4Q8IUM7 802 aa23.02■■□□□ 1.28
SNX13-206ENST00000474067 FIBCD1Q8N539 461 aa23.02■■□□□ 1.28
SNX13-206ENST00000474067 FAM184AQ8NB25 1140 aa23.02■■□□□ 1.28
SNX13-206ENST00000474067 FBXO22Q8NEZ5 403 aa23.02■■□□□ 1.28
SNX13-206ENST00000474067 KCNMB3Q9NPA1 279 aa23.02■■□□□ 1.28
SNX13-206ENST00000474067 SEPT9Q9UHD8 586 aaPredicted RBP23.02■■□□□ 1.28
SNX13-206ENST00000474067 LRFN2Q9ULH4 789 aa23.02■■□□□ 1.28
SNX13-206ENST00000474067 DENND3A2RUS2 1198 aa23.01■■□□□ 1.27
SNX13-206ENST00000474067 LCHNA4D1U4 455 aa23.01■■□□□ 1.27
SNX13-206ENST00000474067 EDIL3O43854 480 aa23.01■■□□□ 1.27
SNX13-206ENST00000474067 FDPSP14324 419 aaKnown RBP23.01■■□□□ 1.27
SNX13-206ENST00000474067 RBM25P49756 843 aaKnown RBP23.01■■□□□ 1.27
SNX13-206ENST00000474067 NFX1Q12986 1120 aaKnown RBP23.01■■□□□ 1.27
SNX13-206ENST00000474067 RABEP1Q15276 862 aa23.01■■□□□ 1.27
SNX13-206ENST00000474067 DIS3L2Q8IYB7 885 aaKnown RBP23.01■■□□□ 1.27
SNX13-206ENST00000474067 SCLT1Q96NL6 688 aa23.01■■□□□ 1.27
SNX13-206ENST00000474067 NIFKQ9BYG3 293 aaKnown RBP23.01■■□□□ 1.27
SNX13-206ENST00000474067 MTCH2Q9Y6C9 303 aa23.01■■□□□ 1.27
SNX13-206ENST00000474067 MYO9BQ13459 2157 aa23■■□□□ 1.27
SNX13-206ENST00000474067 ZBTB42B2RXF5 422 aa23■■□□□ 1.27
SNX13-206ENST00000474067 DLL1O00548 723 aa23■■□□□ 1.27
SNX13-206ENST00000474067 LARGE1O95461 756 aa23■■□□□ 1.27
SNX13-206ENST00000474067 P4HBP07237 508 aaKnown RBP23■■□□□ 1.27
SNX13-206ENST00000474067 QARSP47897 775 aaKnown RBP23■■□□□ 1.27
SNX13-206ENST00000474067 B3GNT9Q6UX72 402 aa23■■□□□ 1.27
SNX13-206ENST00000474067 OTUD6AQ7L8S5 288 aa23■■□□□ 1.27
SNX13-206ENST00000474067 MICALL1Q8N3F8 863 aa23■■□□□ 1.27
SNX13-206ENST00000474067 C8orf76Q96K31 380 aa23■■□□□ 1.27
SNX13-206ENST00000474067 AGO3Q9H9G7 860 aaKnown RBP23■■□□□ 1.27
SNX13-206ENST00000474067 SIP14410 1827 aa23■■□□□ 1.27
SNX13-206ENST00000474067 ADGRA3Q8IWK6 1321 aa23■■□□□ 1.27
SNX13-206ENST00000474067 SLC37A4O43826 429 aa22.99■■□□□ 1.27
SNX13-206ENST00000474067 ZNF862O60290 1169 aa22.99■■□□□ 1.27
SNX13-206ENST00000474067 RB1P06400 928 aa22.99■■□□□ 1.27
SNX13-206ENST00000474067 GRB10Q13322 594 aa22.99■■□□□ 1.27
SNX13-206ENST00000474067 ORC2Q13416 577 aaPredicted RBP22.99■■□□□ 1.27
SNX13-206ENST00000474067 GNL2Q13823 731 aaKnown RBP22.99■■□□□ 1.27
SNX13-206ENST00000474067 SKIV2LQ15477 1246 aaKnown RBP22.99■■□□□ 1.27
SNX13-206ENST00000474067 KRT40Q6A162 431 aa22.99■■□□□ 1.27
SNX13-206ENST00000474067 ZBTB10Q96DT7 871 aa22.99■■□□□ 1.27
SNX13-206ENST00000474067 INO80BQ9C086 356 aaPredicted RBP22.99■■□□□ 1.27
SNX13-206ENST00000474067 COG5Q9UP83 839 aa22.99■■□□□ 1.27
SNX13-206ENST00000474067 GAS2O43903 313 aaKnown RBP22.98■■□□□ 1.27
SNX13-206ENST00000474067 BTG3Q14201 252 aaPredicted RBP22.98■■□□□ 1.27
SNX13-206ENST00000474067 CCDC85BQ15834 202 aaPredicted RBP22.98■■□□□ 1.27
SNX13-206ENST00000474067 TJAP1Q5JTD0 557 aa22.98■■□□□ 1.27
SNX13-206ENST00000474067 CCDC83Q8IWF9 413 aa22.98■■□□□ 1.27
SNX13-206ENST00000474067 NEK9Q8TD19 979 aa22.98■■□□□ 1.27
SNX13-206ENST00000474067 OXER1Q8TDS5 423 aa22.98■■□□□ 1.27
SNX13-206ENST00000474067 SLC7A3Q8WY07 619 aa22.98■■□□□ 1.27
SNX13-206ENST00000474067 SUGCTQ9HAC7 445 aa22.98■■□□□ 1.27
SNX13-206ENST00000474067 MTUS1Q9ULD2 1270 aa22.98■■□□□ 1.27
SNX13-206ENST00000474067 NEMFO60524 1076 aa22.97■■□□□ 1.27
SNX13-206ENST00000474067 JAK2O60674 1132 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms