RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 KIF2CQ99661 725 aa25.43■■□□□ 1.66
PTP4A1-203ENST00000473334 NAP1L4Q99733 375 aaKnown RBP25.43■■□□□ 1.66
PTP4A1-203ENST00000473334 CELF4Q9BZC1 486 aaKnown RBP25.43■■□□□ 1.66
PTP4A1-203ENST00000473334 UNC80Q8N2C7 3258 aa25.43■■□□□ 1.66
PTP4A1-203ENST00000473334 ZNF862O60290 1169 aa25.42■■□□□ 1.66
PTP4A1-203ENST00000473334 OATP04181 439 aa25.42■■□□□ 1.66
PTP4A1-203ENST00000473334 HTRA4P83105 476 aaPredicted RBP25.42■■□□□ 1.66
PTP4A1-203ENST00000473334 PRKCEQ02156 737 aa25.42■■□□□ 1.66
PTP4A1-203ENST00000473334 NR5A1Q13285 461 aa25.42■■□□□ 1.66
PTP4A1-203ENST00000473334 UGCGQ16739 394 aa25.42■■□□□ 1.66
PTP4A1-203ENST00000473334 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.42■■□□□ 1.66
PTP4A1-203ENST00000473334 COL4A4P53420 1690 aaPredicted RBP25.42■■□□□ 1.66
PTP4A1-203ENST00000473334 CCNT1O60563 726 aaKnown RBP25.41■■□□□ 1.66
PTP4A1-203ENST00000473334 CD52P31358 61 aa25.41■■□□□ 1.66
PTP4A1-203ENST00000473334 RBM25P49756 843 aaKnown RBP25.41■■□□□ 1.66
PTP4A1-203ENST00000473334 TRIM29Q14134 588 aa25.41■■□□□ 1.66
PTP4A1-203ENST00000473334 EARS2Q5JPH6 523 aaKnown RBP25.41■■□□□ 1.66
PTP4A1-203ENST00000473334 KIAA0319LQ8IZA0 1049 aa25.41■■□□□ 1.66
PTP4A1-203ENST00000473334 TNFRSF25Q93038 417 aa25.41■■□□□ 1.66
PTP4A1-203ENST00000473334 AGO3Q9H9G7 860 aaKnown RBP25.41■■□□□ 1.66
PTP4A1-203ENST00000473334 KCNMB3Q9NPA1 279 aa25.41■■□□□ 1.66
PTP4A1-203ENST00000473334 NRBP2Q9NSY0 501 aa25.41■■□□□ 1.66
PTP4A1-203ENST00000473334 LINC01553A4QN01 128 aa25.4■■□□□ 1.66
PTP4A1-203ENST00000473334 EPOPA6NHQ4 379 aa25.4■■□□□ 1.66
PTP4A1-203ENST00000473334 UPP2O95045 317 aa25.4■■□□□ 1.66
PTP4A1-203ENST00000473334 MMP1P03956 469 aa25.4■■□□□ 1.66
PTP4A1-203ENST00000473334 SPRED2Q7Z698 418 aa25.4■■□□□ 1.66
PTP4A1-203ENST00000473334 CCDC83Q8IWF9 413 aa25.4■■□□□ 1.66
PTP4A1-203ENST00000473334 ZSCAN31Q96LW9 406 aaPredicted RBP25.4■■□□□ 1.66
PTP4A1-203ENST00000473334 FAM20AQ96MK3 541 aa25.4■■□□□ 1.66
PTP4A1-203ENST00000473334 COL4A6Q14031 1691 aa25.39■■□□□ 1.66
PTP4A1-203ENST00000473334 FAM205CA6NFA0 338 aa25.39■■□□□ 1.66
PTP4A1-203ENST00000473334 RFXAPO00287 272 aa25.39■■□□□ 1.66
PTP4A1-203ENST00000473334 MAGEB2O15479 319 aa25.39■■□□□ 1.66
PTP4A1-203ENST00000473334 FOSBP53539 338 aa25.39■■□□□ 1.66
PTP4A1-203ENST00000473334 SP7Q8TDD2 431 aaPredicted RBP25.39■■□□□ 1.66
PTP4A1-203ENST00000473334 TGS1Q96RS0 853 aaKnown RBP25.39■■□□□ 1.66
PTP4A1-203ENST00000473334 YME1L1Q96TA2 773 aa25.39■■□□□ 1.66
PTP4A1-203ENST00000473334 TBX3O15119 743 aa25.38■■□□□ 1.65
PTP4A1-203ENST00000473334 ERVK-21P61565 698 aa25.38■■□□□ 1.65
PTP4A1-203ENST00000473334 PAK2Q13177 524 aa25.38■■□□□ 1.65
PTP4A1-203ENST00000473334 KRT40Q6A162 431 aa25.38■■□□□ 1.65
PTP4A1-203ENST00000473334 DIS3L2Q8IYB7 885 aaKnown RBP25.38■■□□□ 1.65
PTP4A1-203ENST00000473334 METTL13Q8N6R0 699 aa25.38■■□□□ 1.65
PTP4A1-203ENST00000473334 PPM1EQ8WY54 764 aa25.38■■□□□ 1.65
PTP4A1-203ENST00000473334 LLPHQ9BRT6 129 aaKnown RBP25.38■■□□□ 1.65
PTP4A1-203ENST00000473334 FTHL17Q9BXU8 183 aa25.38■■□□□ 1.65
PTP4A1-203ENST00000473334 PADI3Q9ULW8 664 aa25.38■■□□□ 1.65
PTP4A1-203ENST00000473334 BTBD18B2RXH4 712 aa25.37■■□□□ 1.65
PTP4A1-203ENST00000473334 ENPP3O14638 875 aa25.37■■□□□ 1.65
PTP4A1-203ENST00000473334 POU3F3P20264 500 aaPredicted RBP25.37■■□□□ 1.65
PTP4A1-203ENST00000473334 PPP2R5CQ13362 524 aa25.37■■□□□ 1.65
PTP4A1-203ENST00000473334 POTEDQ86YR6 584 aa25.37■■□□□ 1.65
PTP4A1-203ENST00000473334 SH2B1Q9NRF2 756 aaPredicted RBP25.37■■□□□ 1.65
PTP4A1-203ENST00000473334 VAV3Q9UKW4 847 aa25.37■■□□□ 1.65
PTP4A1-203ENST00000473334 GINS2Q9Y248 185 aa25.37■■□□□ 1.65
PTP4A1-203ENST00000473334 A0A0C4DFX4 3053 aa25.36■■□□□ 1.65
PTP4A1-203ENST00000473334 GTPBP6O43824 516 aaPredicted RBP25.36■■□□□ 1.65
PTP4A1-203ENST00000473334 TMOD1P28289 359 aa25.36■■□□□ 1.65
PTP4A1-203ENST00000473334 CLCN3P51790 818 aa25.36■■□□□ 1.65
PTP4A1-203ENST00000473334 XKR3Q5GH77 459 aa25.36■■□□□ 1.65
PTP4A1-203ENST00000473334 LINC01465Q8N7H1 131 aa25.36■■□□□ 1.65
PTP4A1-203ENST00000473334 LINC01599Q8WXQ3 324 aa25.36■■□□□ 1.65
PTP4A1-203ENST00000473334 CDHR5Q9HBB8 845 aa25.36■■□□□ 1.65
PTP4A1-203ENST00000473334 TTC3P53804 2025 aa25.36■■□□□ 1.65
PTP4A1-203ENST00000473334 MARCH6O60337 910 aa25.35■■□□□ 1.65
PTP4A1-203ENST00000473334 VTNP04004 478 aa25.35■■□□□ 1.65
PTP4A1-203ENST00000473334 GRB10Q13322 594 aa25.35■■□□□ 1.65
PTP4A1-203ENST00000473334 CCDC85BQ15834 202 aaPredicted RBP25.35■■□□□ 1.65
PTP4A1-203ENST00000473334 EFCAB12Q6NXP0 572 aa25.35■■□□□ 1.65
PTP4A1-203ENST00000473334 HAS1Q92839 578 aa25.35■■□□□ 1.65
PTP4A1-203ENST00000473334 MAP7D2Q96T17 732 aa25.35■■□□□ 1.65
PTP4A1-203ENST00000473334 SEPT9Q9UHD8 586 aaPredicted RBP25.35■■□□□ 1.65
PTP4A1-203ENST00000473334 MTUS1Q9ULD2 1270 aa25.35■■□□□ 1.65
PTP4A1-203ENST00000473334 MTCH2Q9Y6C9 303 aa25.35■■□□□ 1.65
PTP4A1-203ENST00000473334 NLRC5Q86WI3 1866 aa25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 EML1O00423 815 aa25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 BAG4O95429 457 aaKnown RBP25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 CRYBB1P53674 252 aaPredicted RBP25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 PSMC5P62195 406 aa25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 TBC1D8BQ0IIM8 1120 aa25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 RABEP1Q15276 862 aa25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 TARBP2Q15633 366 aaKnown RBP25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 KIZQ2M2Z5 673 aa25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 TMEM266Q2M3C6 531 aa25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 ODR4Q5SWX8 454 aa25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 FAM43BQ6ZT52 329 aaPredicted RBP25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 SLFN12Q8IYM2 578 aa25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 MICALL1Q8N3F8 863 aa25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 LRRC71Q8N4P6 559 aa25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 BANK1Q8NDB2 785 aa25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 GDPD5Q8WTR4 605 aa25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 TMEM40Q8WWA1 233 aa25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 PPP1R16BQ96T49 567 aa25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 NIFKQ9BYG3 293 aaKnown RBP25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 UPF2Q9HAU5 1272 aaKnown RBP25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 ERVK-5Q9HDB9 667 aa25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 AKT3Q9Y243 479 aa25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 NOC2LQ9Y3T9 749 aaKnown RBP25.34■■□□□ 1.65
PTP4A1-203ENST00000473334 LPXNO60711 386 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms