RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 PLCB1Q9NQ66 1216 aa23.05■■□□□ 1.28
COL18A1-207ENST00000473212 GOLGA6L10A6NI86 522 aa23.05■■□□□ 1.28
COL18A1-207ENST00000473212 MEFVO15553 781 aaPredicted RBP23.05■■□□□ 1.28
COL18A1-207ENST00000473212 KNOP1Q1ED39 458 aaKnown RBP23.05■■□□□ 1.28
COL18A1-207ENST00000473212 ALKBH5Q6P6C2 394 aaKnown RBP23.05■■□□□ 1.28
COL18A1-207ENST00000473212 C1orf131Q8NDD1 294 aaKnown RBP23.05■■□□□ 1.28
COL18A1-207ENST00000473212 CCT8L2Q96SF2 557 aa23.05■■□□□ 1.28
COL18A1-207ENST00000473212 ASTN1O14525 1302 aa23.04■■□□□ 1.28
COL18A1-207ENST00000473212 AFPP02771 609 aaKnown RBP23.04■■□□□ 1.28
COL18A1-207ENST00000473212 HLA-DOAP06340 250 aa23.04■■□□□ 1.28
COL18A1-207ENST00000473212 HNRNPH1P31943 449 aaKnown RBP23.04■■□□□ 1.28
COL18A1-207ENST00000473212 UAP1Q16222 522 aaPredicted RBP23.04■■□□□ 1.28
COL18A1-207ENST00000473212 EXOC3L4Q17RC7 722 aa23.04■■□□□ 1.28
COL18A1-207ENST00000473212 NLRP14Q86W24 1093 aa23.04■■□□□ 1.28
COL18A1-207ENST00000473212 ACTRT1Q8TDG2 376 aa23.04■■□□□ 1.28
COL18A1-207ENST00000473212 PIGOQ8TEQ8 1089 aa23.04■■□□□ 1.28
COL18A1-207ENST00000473212 CRAMP1Q96RY5 1269 aa23.04■■□□□ 1.28
COL18A1-207ENST00000473212 DDX47Q9H0S4 455 aaKnown RBP23.04■■□□□ 1.28
COL18A1-207ENST00000473212 NEUROG2Q9H2A3 272 aa23.04■■□□□ 1.28
COL18A1-207ENST00000473212 PCDHB13Q9Y5F0 798 aa23.04■■□□□ 1.28
COL18A1-207ENST00000473212 UBR3Q6ZT12 1888 aa23.04■■□□□ 1.28
COL18A1-207ENST00000473212 ATXN2Q99700 1313 aaKnown RBP23.04■■□□□ 1.28
COL18A1-207ENST00000473212 TMCO5BA8MYB1 307 aa23.04■■□□□ 1.28
COL18A1-207ENST00000473212 SART1O43290 800 aaKnown RBP23.04■■□□□ 1.28
COL18A1-207ENST00000473212 METTL13Q8N6R0 699 aa23.04■■□□□ 1.28
COL18A1-207ENST00000473212 MYCBPAPQ8TBZ2 947 aa23.04■■□□□ 1.28
COL18A1-207ENST00000473212 SIX2Q9NPC8 291 aa23.04■■□□□ 1.28
COL18A1-207ENST00000473212 NOC2LQ9Y3T9 749 aaKnown RBP23.04■■□□□ 1.28
COL18A1-207ENST00000473212 GREB1LQ9C091 1923 aaPredicted RBP23.03■■□□□ 1.28
COL18A1-207ENST00000473212 CYP3A7-CYP3A51PA0A087WV96 503 aa23.03■■□□□ 1.28
COL18A1-207ENST00000473212 CYP3A7P24462 503 aa23.03■■□□□ 1.28
COL18A1-207ENST00000473212 GUCY2CP25092 1073 aa23.03■■□□□ 1.28
COL18A1-207ENST00000473212 HDLBPQ00341 1268 aaKnown RBP23.03■■□□□ 1.28
COL18A1-207ENST00000473212 IKQ13123 557 aaPredicted RBP23.03■■□□□ 1.28
COL18A1-207ENST00000473212 CUL1Q13616 776 aa23.03■■□□□ 1.28
COL18A1-207ENST00000473212 IFI16Q16666 785 aaKnown RBP23.03■■□□□ 1.28
COL18A1-207ENST00000473212 KCNV1Q6PIU1 500 aa23.03■■□□□ 1.28
COL18A1-207ENST00000473212 FRMD5Q7Z6J6 570 aa23.03■■□□□ 1.28
COL18A1-207ENST00000473212 SP8Q8IXZ3 490 aa23.03■■□□□ 1.28
COL18A1-207ENST00000473212 TPCN2Q8NHX9 752 aa23.03■■□□□ 1.28
COL18A1-207ENST00000473212 TEKT1Q969V4 418 aa23.03■■□□□ 1.28
COL18A1-207ENST00000473212 MBOAT7Q96N66 472 aa23.03■■□□□ 1.28
COL18A1-207ENST00000473212 BZW2Q9Y6E2 419 aaKnown RBP23.03■■□□□ 1.28
COL18A1-207ENST00000473212 GCOM1H8Y6P7 765 aaPredicted RBP23.03■■□□□ 1.28
COL18A1-207ENST00000473212 PGRMC1O00264 195 aaKnown RBP23.03■■□□□ 1.28
COL18A1-207ENST00000473212 OPLAHO14841 1288 aa23.03■■□□□ 1.28
COL18A1-207ENST00000473212 MYZAPP0CAP1 466 aa23.03■■□□□ 1.28
COL18A1-207ENST00000473212 ITGA4P13612 1032 aa23.03■■□□□ 1.28
COL18A1-207ENST00000473212 EPM2AIP1Q7L775 607 aaPredicted RBP23.03■■□□□ 1.28
COL18A1-207ENST00000473212 SPATS2Q86XZ4 545 aaKnown RBP23.03■■□□□ 1.28
COL18A1-207ENST00000473212 SPICE1Q8N0Z3 855 aa23.03■■□□□ 1.28
COL18A1-207ENST00000473212 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.03■■□□□ 1.28
COL18A1-207ENST00000473212 DNM3Q9UQ16 869 aa23.03■■□□□ 1.28
COL18A1-207ENST00000473212 E7EVH7 732 aa23.02■■□□□ 1.28
COL18A1-207ENST00000473212 H0YGN5 161 aa23.02■■□□□ 1.28
COL18A1-207ENST00000473212 MSH4O15457 936 aa23.02■■□□□ 1.28
COL18A1-207ENST00000473212 GCNT3O95395 438 aa23.02■■□□□ 1.28
COL18A1-207ENST00000473212 CRKP46108 304 aa23.02■■□□□ 1.28
COL18A1-207ENST00000473212 COG2Q14746 738 aa23.02■■□□□ 1.28
COL18A1-207ENST00000473212 EPHA7Q15375 998 aa23.02■■□□□ 1.28
COL18A1-207ENST00000473212 CERKLQ49MI3 558 aaPredicted RBP23.02■■□□□ 1.28
COL18A1-207ENST00000473212 ZC2HC1CQ53FD0 456 aaPredicted RBP23.02■■□□□ 1.28
COL18A1-207ENST00000473212 LRIG3Q6UXM1 1119 aa23.02■■□□□ 1.28
COL18A1-207ENST00000473212 SYT2Q8N9I0 419 aaPredicted RBP23.02■■□□□ 1.28
COL18A1-207ENST00000473212 PPANQ9NQ55 473 aaKnown RBP23.02■■□□□ 1.28
COL18A1-207ENST00000473212 TRAF3IP3Q9Y228 551 aa23.02■■□□□ 1.28
COL18A1-207ENST00000473212 BCS1LQ9Y276 419 aa23.02■■□□□ 1.28
COL18A1-207ENST00000473212 NFS1Q9Y697 457 aa23.02■■□□□ 1.28
COL18A1-207ENST00000473212 SIPA1L1O43166 1804 aa23.02■■□□□ 1.28
COL18A1-207ENST00000473212 PITPNM2Q9BZ72 1349 aa23.02■■□□□ 1.28
COL18A1-207ENST00000473212 ZBTB48P10074 688 aaPredicted RBP23.02■■□□□ 1.27
COL18A1-207ENST00000473212 XRCC5P13010 732 aaKnown RBP23.02■■□□□ 1.27
COL18A1-207ENST00000473212 CTNNA1P35221 906 aaKnown RBP23.02■■□□□ 1.27
COL18A1-207ENST00000473212 CTTNQ14247 550 aaKnown RBP23.02■■□□□ 1.27
COL18A1-207ENST00000473212 SLC35C1Q96A29 364 aa23.02■■□□□ 1.27
COL18A1-207ENST00000473212 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.02■■□□□ 1.276e-24■■□□□ 13.9
COL18A1-207ENST00000473212 FAM198AQ9UFP1 575 aa23.02■■□□□ 1.27
COL18A1-207ENST00000473212 MYO1FO00160 1098 aa23.01■■□□□ 1.27
COL18A1-207ENST00000473212 KRIT1O00522 736 aa23.01■■□□□ 1.27
COL18A1-207ENST00000473212 NR3C1P04150 777 aa23.01■■□□□ 1.27
COL18A1-207ENST00000473212 RPA1P27694 616 aa23.01■■□□□ 1.27
COL18A1-207ENST00000473212 FLT3P36888 993 aa23.01■■□□□ 1.27
COL18A1-207ENST00000473212 RBM5P52756 815 aaKnown RBP eCLIP23.01■■□□□ 1.27
COL18A1-207ENST00000473212 MICALCLQ6ZW33 695 aa23.01■■□□□ 1.27
COL18A1-207ENST00000473212 PEX26Q7Z412 305 aa23.01■■□□□ 1.27
COL18A1-207ENST00000473212 EIF1ADQ8N9N8 165 aaKnown RBP23.01■■□□□ 1.27
COL18A1-207ENST00000473212 NAP1L4Q99733 375 aaKnown RBP23.01■■□□□ 1.27
COL18A1-207ENST00000473212 F5H6K3 240 aa23.01■■□□□ 1.27
COL18A1-207ENST00000473212 FLOT1O75955 427 aa23.01■■□□□ 1.27
COL18A1-207ENST00000473212 NMT1P30419 496 aaKnown RBP23.01■■□□□ 1.27
COL18A1-207ENST00000473212 FNTAP49354 379 aa23.01■■□□□ 1.27
COL18A1-207ENST00000473212 KLRC3Q07444 240 aa23.01■■□□□ 1.27
COL18A1-207ENST00000473212 SLFN12Q8IYM2 578 aa23.01■■□□□ 1.27
COL18A1-207ENST00000473212 CNPY4Q8N129 248 aa23.01■■□□□ 1.27
COL18A1-207ENST00000473212 LRRC45Q96CN5 670 aa23.01■■□□□ 1.27
COL18A1-207ENST00000473212 PAGR1Q9BTK6 254 aa23.01■■□□□ 1.27
COL18A1-207ENST00000473212 GCNT4Q9P109 453 aa23.01■■□□□ 1.27
COL18A1-207ENST00000473212 AMACRQ9UHK6 382 aa23.01■■□□□ 1.27
COL18A1-207ENST00000473212 H0YHG0 523 aa23■■□□□ 1.27
COL18A1-207ENST00000473212 CHMP2AO43633 222 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms