RNA–Protein interactions for RNA: ENST00000471913.5

AMPH-208, Transcript of amphiphysin, humanhuman

TSL 1 (best)

Gene AMPH, Length 1,778 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMPH-208ENST00000471913 GDF3Q9NR23 364 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 DMGDHQ9UI17 866 aaKnown RBP13.07□□□□□ -0.32
AMPH-208ENST00000471913 RRP15Q9Y3B9 282 aaKnown RBP13.07□□□□□ -0.32
AMPH-208ENST00000471913 SSC5DA1L4H1 1573 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 POTECB2RU33 542 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 E9PMD0 336 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 MYO1CO00159 1063 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 PDXKO00764 312 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 SLC16A3O15427 465 aaKnown RBP13.07□□□□□ -0.32
AMPH-208ENST00000471913 RPL13P26373 211 aaKnown RBP13.07□□□□□ -0.32
AMPH-208ENST00000471913 RPA1P27694 616 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 EPHX2P34913 555 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 ECE1P42892 770 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 TNNC1P63316 161 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 BMT2Q1RMZ1 405 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 QRICH1Q2TAL8 776 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 MEI1Q5TIA1 1274 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 PRAMEF18Q5VWM3 479 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 TTBK2Q6IQ55 1244 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 FMNL3Q8IVF7 1028 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 SYT2Q8N9I0 419 aaPredicted RBP13.07□□□□□ -0.32
AMPH-208ENST00000471913 CRYGNQ8WXF5 182 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 WDR90Q96KV7 1748 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 RASSF4Q9H2L5 321 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 NLRC4Q9NPP4 1024 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 SALL4Q9UJQ4 1053 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 DNM3Q9UQ16 869 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 DAAM1Q9Y4D1 1078 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 PCDHA1Q9Y5I3 950 aa13.07□□□□□ -0.32
AMPH-208ENST00000471913 MYH7BA7E2Y1 1941 aa13.06□□□□□ -0.32
AMPH-208ENST00000471913 POTEB3A0JP26 581 aa13.06□□□□□ -0.32
AMPH-208ENST00000471913 ZMYND10O75800 440 aa13.06□□□□□ -0.32
AMPH-208ENST00000471913 GFPT2O94808 682 aa13.06□□□□□ -0.32
AMPH-208ENST00000471913 AFPP02771 609 aaKnown RBP13.06□□□□□ -0.32
AMPH-208ENST00000471913 PRKCIP41743 596 aa13.06□□□□□ -0.32
AMPH-208ENST00000471913 RAPGEF1Q13905 1077 aa13.06□□□□□ -0.32
AMPH-208ENST00000471913 KNOP1Q1ED39 458 aaKnown RBP13.06□□□□□ -0.32
AMPH-208ENST00000471913 SUPT20HL1Q3ZLR7 823 aa13.06□□□□□ -0.32
AMPH-208ENST00000471913 POTEBQ6S5H4 581 aa13.06□□□□□ -0.32
AMPH-208ENST00000471913 BTNL9Q6UXG8 535 aa13.06□□□□□ -0.32
AMPH-208ENST00000471913 KCTD1Q719H9 257 aa13.06□□□□□ -0.32
AMPH-208ENST00000471913 GLIS3Q8NEA6 775 aa13.06□□□□□ -0.32
AMPH-208ENST00000471913 ETNPPLQ8TBG4 499 aa13.06□□□□□ -0.32
AMPH-208ENST00000471913 WHAMMQ8TF30 809 aa13.06□□□□□ -0.32
AMPH-208ENST00000471913 TBC1D5Q92609 795 aa13.06□□□□□ -0.32
AMPH-208ENST00000471913 DCPSQ96C86 337 aaKnown RBP13.06□□□□□ -0.32
AMPH-208ENST00000471913 PBKQ96KB5 322 aa13.06□□□□□ -0.32
AMPH-208ENST00000471913 AMNQ9BXJ7 453 aa13.06□□□□□ -0.32
AMPH-208ENST00000471913 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.06□□□□□ -0.32
AMPH-208ENST00000471913 ARMCX3Q9UH62 379 aaPredicted RBP13.06□□□□□ -0.32
AMPH-208ENST00000471913 FEZ2Q9UHY8 353 aaPredicted RBP13.06□□□□□ -0.32
AMPH-208ENST00000471913 GTPBP10A4D1E9 387 aaKnown RBP13.05□□□□□ -0.32
AMPH-208ENST00000471913 IQCA1LA6NCM1 817 aa13.05□□□□□ -0.32
AMPH-208ENST00000471913 PALMO75781 387 aa13.05□□□□□ -0.32
AMPH-208ENST00000471913 NR2F2P24468 414 aa13.05□□□□□ -0.32
AMPH-208ENST00000471913 INPP5BP32019 993 aa13.05□□□□□ -0.32
AMPH-208ENST00000471913 CIITAP33076 1130 aa13.05□□□□□ -0.32
AMPH-208ENST00000471913 KCNH2Q12809 1159 aa13.05□□□□□ -0.32
AMPH-208ENST00000471913 CDC37Q16543 378 aaPredicted RBP13.05□□□□□ -0.32
AMPH-208ENST00000471913 KIAA0753Q2KHM9 967 aa13.05□□□□□ -0.32
AMPH-208ENST00000471913 KIAA1755Q5JYT7 1200 aa13.05□□□□□ -0.32
AMPH-208ENST00000471913 EPM2AIP1Q7L775 607 aaPredicted RBP13.05□□□□□ -0.32
AMPH-208ENST00000471913 VPS36Q86VN1 386 aa13.05□□□□□ -0.32
AMPH-208ENST00000471913 TAF4BQ92750 862 aa13.05□□□□□ -0.32
AMPH-208ENST00000471913 KLRG1Q96E93 195 aa13.05□□□□□ -0.32
AMPH-208ENST00000471913 TAF1DQ9H5J8 278 aaPredicted RBP13.05□□□□□ -0.32
AMPH-208ENST00000471913 VCPKMTQ9H867 229 aa13.05□□□□□ -0.32
AMPH-208ENST00000471913 GOPCQ9HD26 462 aa13.05□□□□□ -0.32
AMPH-208ENST00000471913 RBM12Q9NTZ6 932 aaKnown RBP13.05□□□□□ -0.32
AMPH-208ENST00000471913 INTUQ9ULD6 942 aa13.05□□□□□ -0.32
AMPH-208ENST00000471913 DOCK1Q14185 1865 aa13.05□□□□□ -0.32
AMPH-208ENST00000471913 A0A0A6YYK5 440 aaPredicted RBP13.04□□□□□ -0.32
AMPH-208ENST00000471913 BUB1O43683 1085 aa13.04□□□□□ -0.32
AMPH-208ENST00000471913 MED24O75448 989 aa13.04□□□□□ -0.32
AMPH-208ENST00000471913 FLOT1O75955 427 aa13.04□□□□□ -0.32
AMPH-208ENST00000471913 BMP3P12645 472 aa13.04□□□□□ -0.32
AMPH-208ENST00000471913 GAP43P17677 238 aa13.04□□□□□ -0.32
AMPH-208ENST00000471913 SLC16A2P36021 539 aa13.04□□□□□ -0.32
AMPH-208ENST00000471913 SREBF1P36956 1147 aa13.04□□□□□ -0.32
AMPH-208ENST00000471913 SKOR1P84550 965 aa13.04□□□□□ -0.32
AMPH-208ENST00000471913 ARHGAP4P98171 946 aa13.04□□□□□ -0.32
AMPH-208ENST00000471913 SPIRE1Q08AE8 756 aa13.04□□□□□ -0.32
AMPH-208ENST00000471913 NFIL3Q16649 462 aa13.04□□□□□ -0.32
AMPH-208ENST00000471913 DNAJC21Q5F1R6 531 aaKnown RBP13.04□□□□□ -0.32
AMPH-208ENST00000471913 SULF1Q8IWU6 871 aa13.04□□□□□ -0.32
AMPH-208ENST00000471913 CD302Q8IX05 232 aa13.04□□□□□ -0.32
AMPH-208ENST00000471913 NELFCDQ8IXH7 590 aa13.04□□□□□ -0.32
AMPH-208ENST00000471913 GSPT2Q8IYD1 628 aaKnown RBP13.04□□□□□ -0.32
AMPH-208ENST00000471913 SCYL3Q8IZE3 742 aa13.04□□□□□ -0.32
AMPH-208ENST00000471913 HDAC7Q8WUI4 952 aa13.04□□□□□ -0.32
AMPH-208ENST00000471913 LMBR1Q8WVP7 490 aa13.04□□□□□ -0.32
AMPH-208ENST00000471913 CALR3Q96L12 384 aaKnown RBP13.04□□□□□ -0.32
AMPH-208ENST00000471913 POLR3CQ9BUI4 534 aaPredicted RBP13.04□□□□□ -0.32
AMPH-208ENST00000471913 GLIS2Q9BZE0 524 aaPredicted RBP13.04□□□□□ -0.32
AMPH-208ENST00000471913 TYW1Q9NV66 732 aaKnown RBP13.04□□□□□ -0.32
AMPH-208ENST00000471913 SPDYE3A6NKU9 549 aa13.04□□□□□ -0.32
AMPH-208ENST00000471913 NCK2O43639 380 aa13.04□□□□□ -0.32
AMPH-208ENST00000471913 PLA2G6O60733 806 aa13.04□□□□□ -0.32
AMPH-208ENST00000471913 XRCC5P13010 732 aaKnown RBP13.04□□□□□ -0.32
AMPH-208ENST00000471913 KLRC1P26715 233 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms