RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 ATP2C1P98194 919 aaPredicted RBP15.31■□□□□ 0.04
HDAC7-219ENST00000470668 DYNC1I2Q13409 638 aaKnown RBP15.31■□□□□ 0.04
HDAC7-219ENST00000470668 PDXDC1Q6P996 788 aa15.31■□□□□ 0.04
HDAC7-219ENST00000470668 UNC13DQ70J99 1090 aa15.31■□□□□ 0.04
HDAC7-219ENST00000470668 OGFOD1Q8N543 542 aa15.31■□□□□ 0.04
HDAC7-219ENST00000470668 CASKIN2Q8WXE0 1202 aa15.31■□□□□ 0.04
HDAC7-219ENST00000470668 PCIF1Q9H4Z3 704 aa15.31■□□□□ 0.04
HDAC7-219ENST00000470668 UBE2TQ9NPD8 197 aaPredicted RBP15.31■□□□□ 0.04
HDAC7-219ENST00000470668 TTC7AQ9ULT0 858 aaPredicted RBP15.31■□□□□ 0.04
HDAC7-219ENST00000470668 HPSEQ9Y251 543 aa15.31■□□□□ 0.04
HDAC7-219ENST00000470668 CDC37Q16543 378 aaPredicted RBP15.3■□□□□ 0.04
HDAC7-219ENST00000470668 LONRF1Q17RB8 773 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 BBS9Q3SYG4 887 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 GLYCTKQ8IVS8 523 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 KCNB2Q92953 911 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 DYNLL2Q96FJ2 89 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 HAUS5O94927 633 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 CRKLP46109 303 aaKnown RBP15.3■□□□□ 0.04
HDAC7-219ENST00000470668 KIF22Q14807 665 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 ZNF746Q6NUN9 644 aaPredicted RBP15.3■□□□□ 0.04
HDAC7-219ENST00000470668 ATP2A3Q93084 1043 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 ALG13Q9NP73 1137 aaKnown RBP15.3■□□□□ 0.04
HDAC7-219ENST00000470668 SAYSD1Q9NPB0 183 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 LAMC1P11047 1609 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 CAMSAP1Q5T5Y3 1602 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 USP17L3A6NCW0 530 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 USP17L4A6NCW7 530 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 H7C1W4 665 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 ATP5HO75947 161 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 GLI1P08151 1106 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 PLS3P13797 630 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 COPB2P35606 906 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 ZYXQ15942 572 aaKnown RBP15.3■□□□□ 0.04
HDAC7-219ENST00000470668 TRAPPC3LQ5T215 181 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 USP17L1Q7RTZ2 530 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 CARD10Q9BWT7 1032 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 TRIM55Q9BYV6 548 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 SLITRK6Q9H5Y7 841 aa15.3■□□□□ 0.04
HDAC7-219ENST00000470668 INO80Q9ULG1 1556 aaPredicted RBP15.3■□□□□ 0.04
HDAC7-219ENST00000470668 IQGAP1P46940 1657 aa15.29■□□□□ 0.04
HDAC7-219ENST00000470668 NSFP46459 744 aaKnown RBP15.29■□□□□ 0.04
HDAC7-219ENST00000470668 DYNLT1P63172 113 aa15.29■□□□□ 0.04
HDAC7-219ENST00000470668 TTLL11Q8NHH1 800 aa15.29■□□□□ 0.04
HDAC7-219ENST00000470668 ADGRB1O14514 1584 aa15.29■□□□□ 0.04
HDAC7-219ENST00000470668 K7ENM7 598 aa15.29■□□□□ 0.04
HDAC7-219ENST00000470668 NDC80O14777 642 aa15.29■□□□□ 0.04
HDAC7-219ENST00000470668 SYF2O95926 243 aaKnown RBP15.29■□□□□ 0.04
HDAC7-219ENST00000470668 PLA2G4BP0C869 781 aa15.29■□□□□ 0.04
HDAC7-219ENST00000470668 PSMC2P35998 433 aaKnown RBP15.29■□□□□ 0.04
HDAC7-219ENST00000470668 C1orf146Q5VVC0 180 aa15.29■□□□□ 0.04
HDAC7-219ENST00000470668 PAPD7Q5XG87 772 aaKnown RBP15.29■□□□□ 0.04
HDAC7-219ENST00000470668 DNAJC9Q8WXX5 260 aa15.29■□□□□ 0.04
HDAC7-219ENST00000470668 TEKT1Q969V4 418 aa15.29■□□□□ 0.04
HDAC7-219ENST00000470668 MIEF2Q96C03 454 aa15.29■□□□□ 0.04
HDAC7-219ENST00000470668 ANKRD2Q9GZV1 360 aa15.29■□□□□ 0.04
HDAC7-219ENST00000470668 XAB2Q9HCS7 855 aaKnown RBP15.29■□□□□ 0.04
HDAC7-219ENST00000470668 ZNF335Q9H4Z2 1342 aaPredicted RBP15.29■□□□□ 0.04
HDAC7-219ENST00000470668 DNAJC6O75061 913 aa15.29■□□□□ 0.04
HDAC7-219ENST00000470668 LMNAP02545 664 aaKnown RBP15.29■□□□□ 0.04
HDAC7-219ENST00000470668 USP17L8P0C7I0 530 aa15.29■□□□□ 0.04
HDAC7-219ENST00000470668 KCNA3P22001 575 aa15.29■□□□□ 0.04
HDAC7-219ENST00000470668 TRAF1Q13077 416 aa15.29■□□□□ 0.04
HDAC7-219ENST00000470668 PLCB4Q15147 1175 aa15.29■□□□□ 0.04
HDAC7-219ENST00000470668 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.29■□□□□ 0.04
HDAC7-219ENST00000470668 CXorf38Q8TB03 319 aa15.29■□□□□ 0.04
HDAC7-219ENST00000470668 CNGA1P29973 690 aa15.29■□□□□ 0.04
HDAC7-219ENST00000470668 TCP10Q12799 353 aa15.29■□□□□ 0.04
HDAC7-219ENST00000470668 CCDC137Q6PK04 289 aaKnown RBP15.29■□□□□ 0.04
HDAC7-219ENST00000470668 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.29■□□□□ 0.04
HDAC7-219ENST00000470668 GAS7O60861 476 aa15.28■□□□□ 0.04
HDAC7-219ENST00000470668 HERVK_113P62684 666 aa15.28■□□□□ 0.04
HDAC7-219ENST00000470668 PPWD1Q96BP3 646 aaKnown RBP15.28■□□□□ 0.04
HDAC7-219ENST00000470668 CCDC124Q96CT7 223 aaKnown RBP15.28■□□□□ 0.04
HDAC7-219ENST00000470668 DNAJC12Q9UKB3 198 aa15.28■□□□□ 0.04
HDAC7-219ENST00000470668 CFLARO15519 480 aa15.28■□□□□ 0.04
HDAC7-219ENST00000470668 GNAT1P11488 350 aa15.28■□□□□ 0.04
HDAC7-219ENST00000470668 ZNF18P17022 549 aa15.28■□□□□ 0.04
HDAC7-219ENST00000470668 DEUP1Q05D60 604 aa15.28■□□□□ 0.04
HDAC7-219ENST00000470668 SLC29A2Q14542 456 aa15.28■□□□□ 0.04
HDAC7-219ENST00000470668 FUKQ8N0W3 1084 aa15.28■□□□□ 0.04
HDAC7-219ENST00000470668 TSEN2Q8NCE0 465 aaKnown RBP15.28■□□□□ 0.04
HDAC7-219ENST00000470668 IGDCC4Q8TDY8 1250 aa15.28■□□□□ 0.04
HDAC7-219ENST00000470668 TRIM9Q9C026 710 aa15.28■□□□□ 0.04
HDAC7-219ENST00000470668 DDX20Q9UHI6 824 aaKnown RBP15.28■□□□□ 0.04
HDAC7-219ENST00000470668 MYBL2P10244 700 aa15.28■□□□□ 0.04
HDAC7-219ENST00000470668 HSPA9P38646 679 aaKnown RBP15.28■□□□□ 0.04
HDAC7-219ENST00000470668 KCNB1Q14721 858 aa15.28■□□□□ 0.04
HDAC7-219ENST00000470668 UBE2SQ16763 222 aa15.28■□□□□ 0.04
HDAC7-219ENST00000470668 LRIG3Q6UXM1 1119 aa15.28■□□□□ 0.04
HDAC7-219ENST00000470668 TRIML2Q8N7C3 387 aa15.28■□□□□ 0.04
HDAC7-219ENST00000470668 TRPC6Q9Y210 931 aa15.28■□□□□ 0.04
HDAC7-219ENST00000470668 THRAP3Q9Y2W1 955 aaKnown RBP15.28■□□□□ 0.04
HDAC7-219ENST00000470668 UBTFL6P0CB48 400 aaPredicted RBP15.27■□□□□ 0.04
HDAC7-219ENST00000470668 SLC18A3Q16572 532 aa15.27■□□□□ 0.04
HDAC7-219ENST00000470668 C1orf54Q8WWF1 131 aa15.27■□□□□ 0.04
HDAC7-219ENST00000470668 LMTK2Q8IWU2 1503 aa15.27■□□□□ 0.04
HDAC7-219ENST00000470668 RNF8O76064 485 aa15.27■□□□□ 0.04
HDAC7-219ENST00000470668 FAM153BP0C7A2 387 aa15.27■□□□□ 0.04
HDAC7-219ENST00000470668 SLC16A2P36021 539 aa15.27■□□□□ 0.04
HDAC7-219ENST00000470668 FAM153CQ494X1 144 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms