RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 LINC01553A4QN01 128 aa20.62■□□□□ 0.89
PHGDH-204ENST00000469443 EPOPA6NHQ4 379 aa20.62■□□□□ 0.89
PHGDH-204ENST00000469443 RFXAPO00287 272 aa20.62■□□□□ 0.89
PHGDH-204ENST00000469443 SLC37A4O43826 429 aa20.62■□□□□ 0.89
PHGDH-204ENST00000469443 C22orf31O95567 290 aa20.62■□□□□ 0.89
PHGDH-204ENST00000469443 GCFC2P16383 781 aaKnown RBP20.62■□□□□ 0.89
PHGDH-204ENST00000469443 B3GNT9Q6UX72 402 aa20.62■□□□□ 0.89
PHGDH-204ENST00000469443 PIK3AP1Q6ZUJ8 805 aa20.62■□□□□ 0.89
PHGDH-204ENST00000469443 TRMT1LQ7Z2T5 733 aaKnown RBP20.62■□□□□ 0.89
PHGDH-204ENST00000469443 SPRED2Q7Z698 418 aa20.62■□□□□ 0.89
PHGDH-204ENST00000469443 AGO3Q9H9G7 860 aaKnown RBP20.62■□□□□ 0.89
PHGDH-204ENST00000469443 LIMCH1Q9UPQ0 1083 aa20.62■□□□□ 0.89
PHGDH-204ENST00000469443 ZNF862O60290 1169 aa20.61■□□□□ 0.89
PHGDH-204ENST00000469443 JAK2O60674 1132 aa20.61■□□□□ 0.89
PHGDH-204ENST00000469443 UPP2O95045 317 aa20.61■□□□□ 0.89
PHGDH-204ENST00000469443 OATP04181 439 aa20.61■□□□□ 0.89
PHGDH-204ENST00000469443 POU3F3P20264 500 aaPredicted RBP20.61■□□□□ 0.89
PHGDH-204ENST00000469443 CD52P31358 61 aa20.61■□□□□ 0.89
PHGDH-204ENST00000469443 KRT2P35908 639 aa20.61■□□□□ 0.89
PHGDH-204ENST00000469443 ST3GAL1Q11201 340 aa20.61■□□□□ 0.89
PHGDH-204ENST00000469443 PPP4R3AQ6IN85 833 aa20.61■□□□□ 0.89
PHGDH-204ENST00000469443 MIER3Q7Z3K6 550 aa20.61■□□□□ 0.89
PHGDH-204ENST00000469443 KIAA0319LQ8IZA0 1049 aa20.61■□□□□ 0.89
PHGDH-204ENST00000469443 SP7Q8TDD2 431 aaPredicted RBP20.61■□□□□ 0.89
PHGDH-204ENST00000469443 PPM1EQ8WY54 764 aa20.61■□□□□ 0.89
PHGDH-204ENST00000469443 NAP1L4Q99733 375 aaKnown RBP20.61■□□□□ 0.89
PHGDH-204ENST00000469443 BRMS1Q9HCU9 246 aa20.61■□□□□ 0.89
PHGDH-204ENST00000469443 NRBP2Q9NSY0 501 aa20.61■□□□□ 0.89
PHGDH-204ENST00000469443 ERVK-21P61565 698 aa20.6■□□□□ 0.89
PHGDH-204ENST00000469443 PRKCEQ02156 737 aa20.6■□□□□ 0.89
PHGDH-204ENST00000469443 UGCGQ16739 394 aa20.6■□□□□ 0.89
PHGDH-204ENST00000469443 EARS2Q5JPH6 523 aaKnown RBP20.6■□□□□ 0.89
PHGDH-204ENST00000469443 FAM20AQ96MK3 541 aa20.6■□□□□ 0.89
PHGDH-204ENST00000469443 TGS1Q96RS0 853 aaKnown RBP20.6■□□□□ 0.89
PHGDH-204ENST00000469443 REV3LO60673 3130 aa20.6■□□□□ 0.89
PHGDH-204ENST00000469443 ENPP3O14638 875 aa20.59■□□□□ 0.89
PHGDH-204ENST00000469443 MAGEB2O15479 319 aa20.59■□□□□ 0.89
PHGDH-204ENST00000469443 GTPBP6O43824 516 aaPredicted RBP20.59■□□□□ 0.89
PHGDH-204ENST00000469443 CCNT1O60563 726 aaKnown RBP20.59■□□□□ 0.89
PHGDH-204ENST00000469443 NR5A1Q13285 461 aa20.59■□□□□ 0.89
PHGDH-204ENST00000469443 CCDC85BQ15834 202 aaPredicted RBP20.59■□□□□ 0.89
PHGDH-204ENST00000469443 TNFRSF25Q93038 417 aa20.59■□□□□ 0.89
PHGDH-204ENST00000469443 YME1L1Q96TA2 773 aa20.59■□□□□ 0.89
PHGDH-204ENST00000469443 KIF2CQ99661 725 aa20.59■□□□□ 0.89
PHGDH-204ENST00000469443 FTHL17Q9BXU8 183 aa20.59■□□□□ 0.89
PHGDH-204ENST00000469443 KCNMB3Q9NPA1 279 aa20.59■□□□□ 0.89
PHGDH-204ENST00000469443 PADI3Q9ULW8 664 aa20.59■□□□□ 0.89
PHGDH-204ENST00000469443 MMP1P03956 469 aa20.58■□□□□ 0.89
PHGDH-204ENST00000469443 PAK2Q13177 524 aa20.58■□□□□ 0.89
PHGDH-204ENST00000469443 GRB10Q13322 594 aa20.58■□□□□ 0.89
PHGDH-204ENST00000469443 TRIM29Q14134 588 aa20.58■□□□□ 0.89
PHGDH-204ENST00000469443 METTL13Q8N6R0 699 aa20.58■□□□□ 0.89
PHGDH-204ENST00000469443 GINS2Q9Y248 185 aa20.58■□□□□ 0.89
PHGDH-204ENST00000469443 MTCH2Q9Y6C9 303 aa20.58■□□□□ 0.89
PHGDH-204ENST00000469443 KIAA1671Q9BY89 1806 aa20.57■□□□□ 0.88
PHGDH-204ENST00000469443 FAM205CA6NFA0 338 aa20.57■□□□□ 0.88
PHGDH-204ENST00000469443 TBX3O15119 743 aa20.57■□□□□ 0.88
PHGDH-204ENST00000469443 RBM25P49756 843 aaKnown RBP20.57■□□□□ 0.88
PHGDH-204ENST00000469443 KRT40Q6A162 431 aa20.57■□□□□ 0.88
PHGDH-204ENST00000469443 EFCAB12Q6NXP0 572 aa20.57■□□□□ 0.88
PHGDH-204ENST00000469443 CCDC83Q8IWF9 413 aa20.57■□□□□ 0.88
PHGDH-204ENST00000469443 DIS3L2Q8IYB7 885 aaKnown RBP20.57■□□□□ 0.88
PHGDH-204ENST00000469443 LINC01465Q8N7H1 131 aa20.57■□□□□ 0.88
PHGDH-204ENST00000469443 LINC01599Q8WXQ3 324 aa20.57■□□□□ 0.88
PHGDH-204ENST00000469443 ZSCAN31Q96LW9 406 aaPredicted RBP20.57■□□□□ 0.88
PHGDH-204ENST00000469443 CDHR5Q9HBB8 845 aa20.57■□□□□ 0.88
PHGDH-204ENST00000469443 MTUS1Q9ULD2 1270 aa20.57■□□□□ 0.88
PHGDH-204ENST00000469443 ARID2Q68CP9 1835 aa20.57■□□□□ 0.88
PHGDH-204ENST00000469443 LPXNO60711 386 aa20.56■□□□□ 0.88
PHGDH-204ENST00000469443 VTNP04004 478 aa20.56■□□□□ 0.88
PHGDH-204ENST00000469443 TMOD1P28289 359 aa20.56■□□□□ 0.88
PHGDH-204ENST00000469443 CLCN3P51790 818 aa20.56■□□□□ 0.88
PHGDH-204ENST00000469443 FOSBP53539 338 aa20.56■□□□□ 0.88
PHGDH-204ENST00000469443 PPP2R5CQ13362 524 aa20.56■□□□□ 0.88
PHGDH-204ENST00000469443 XKR3Q5GH77 459 aa20.56■□□□□ 0.88
PHGDH-204ENST00000469443 ODR4Q5SWX8 454 aa20.56■□□□□ 0.88
PHGDH-204ENST00000469443 FAM43BQ6ZT52 329 aaPredicted RBP20.56■□□□□ 0.88
PHGDH-204ENST00000469443 RTN4RL1Q86UN2 441 aaPredicted RBP20.56■□□□□ 0.88
PHGDH-204ENST00000469443 MICALL1Q8N3F8 863 aa20.56■□□□□ 0.88
PHGDH-204ENST00000469443 GDPD5Q8WTR4 605 aa20.56■□□□□ 0.88
PHGDH-204ENST00000469443 SAMD11Q96NU1 681 aa20.56■□□□□ 0.88
PHGDH-204ENST00000469443 LLPHQ9BRT6 129 aaKnown RBP20.56■□□□□ 0.88
PHGDH-204ENST00000469443 SUGCTQ9HAC7 445 aa20.56■□□□□ 0.88
PHGDH-204ENST00000469443 VAV3Q9UKW4 847 aa20.56■□□□□ 0.88
PHGDH-204ENST00000469443 NOC2LQ9Y3T9 749 aaKnown RBP20.56■□□□□ 0.88
PHGDH-204ENST00000469443 CUL9Q8IWT3 2517 aa20.56■□□□□ 0.88
PHGDH-204ENST00000469443 BTBD18B2RXH4 712 aa20.55■□□□□ 0.88
PHGDH-204ENST00000469443 EML1O00423 815 aa20.55■□□□□ 0.88
PHGDH-204ENST00000469443 DLL1O00548 723 aa20.55■□□□□ 0.88
PHGDH-204ENST00000469443 MARCH6O60337 910 aa20.55■□□□□ 0.88
PHGDH-204ENST00000469443 RPS6KA5O75582 802 aa20.55■□□□□ 0.88
PHGDH-204ENST00000469443 CRYBB1P53674 252 aaPredicted RBP20.55■□□□□ 0.88
PHGDH-204ENST00000469443 NFX1Q12986 1120 aaKnown RBP20.55■□□□□ 0.88
PHGDH-204ENST00000469443 TARBP2Q15633 366 aaKnown RBP20.55■□□□□ 0.88
PHGDH-204ENST00000469443 KIZQ2M2Z5 673 aa20.55■□□□□ 0.88
PHGDH-204ENST00000469443 TMEM266Q2M3C6 531 aa20.55■□□□□ 0.88
PHGDH-204ENST00000469443 LRRC71Q8N4P6 559 aa20.55■□□□□ 0.88
PHGDH-204ENST00000469443 TMEM40Q8WWA1 233 aa20.55■□□□□ 0.88
PHGDH-204ENST00000469443 HAS1Q92839 578 aa20.55■□□□□ 0.88
PHGDH-204ENST00000469443 MAP7D2Q96T17 732 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms