RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 TRAF7Q6Q0C0 670 aa15.34■□□□□ 0.05
LIMD1-203ENST00000465039 ANO5Q75V66 913 aa15.34■□□□□ 0.05
LIMD1-203ENST00000465039 BANK1Q8NDB2 785 aa15.34■□□□□ 0.05
LIMD1-203ENST00000465039 ZNF396Q96N95 335 aaPredicted RBP15.34■□□□□ 0.05
LIMD1-203ENST00000465039 UBE2OQ9C0C9 1292 aaKnown RBP15.34■□□□□ 0.05
LIMD1-203ENST00000465039 MTIF3Q9H2K0 278 aaKnown RBP15.34■□□□□ 0.05
LIMD1-203ENST00000465039 SEPT9Q9UHD8 586 aaPredicted RBP15.34■□□□□ 0.05
LIMD1-203ENST00000465039 IGKV6-21A0A0C4DH24 114 aa15.33■□□□□ 0.04
LIMD1-203ENST00000465039 RSPH10B2B2RC85 870 aa15.33■□□□□ 0.04
LIMD1-203ENST00000465039 M0QZ92 97 aa15.33■□□□□ 0.04
LIMD1-203ENST00000465039 EFCAB14O75071 495 aa15.33■□□□□ 0.04
LIMD1-203ENST00000465039 F13A1P00488 732 aa15.33■□□□□ 0.04
LIMD1-203ENST00000465039 RSPH10BP0C881 870 aa15.33■□□□□ 0.04
LIMD1-203ENST00000465039 SPATA31C1P0DKV0 1188 aa15.33■□□□□ 0.04
LIMD1-203ENST00000465039 LONP1P36776 959 aaKnown RBP15.33■□□□□ 0.04
LIMD1-203ENST00000465039 THPOP40225 353 aa15.33■□□□□ 0.04
LIMD1-203ENST00000465039 NASPP49321 788 aaPredicted RBP15.33■□□□□ 0.04
LIMD1-203ENST00000465039 ZNF200P98182 395 aaPredicted RBP15.33■□□□□ 0.04
LIMD1-203ENST00000465039 MDM2Q00987 491 aaPredicted RBP15.33■□□□□ 0.04
LIMD1-203ENST00000465039 SF3A1Q15459 793 aaKnown RBP15.33■□□□□ 0.04
LIMD1-203ENST00000465039 KRT79Q5XKE5 535 aa15.33■□□□□ 0.04
LIMD1-203ENST00000465039 LINC01465Q8N7H1 131 aa15.33■□□□□ 0.04
LIMD1-203ENST00000465039 SLC7A3Q8WY07 619 aa15.33■□□□□ 0.04
LIMD1-203ENST00000465039 DYDC2Q96IM9 177 aa15.33■□□□□ 0.04
LIMD1-203ENST00000465039 NACC1Q96RE7 527 aa15.33■□□□□ 0.04
LIMD1-203ENST00000465039 CEP89Q96ST8 783 aa15.33■□□□□ 0.04
LIMD1-203ENST00000465039 MAP7D2Q96T17 732 aa15.33■□□□□ 0.04
LIMD1-203ENST00000465039 CYP26B1Q9NR63 512 aa15.33■□□□□ 0.04
LIMD1-203ENST00000465039 DBR1Q9UK59 544 aaKnown RBP15.33■□□□□ 0.04
LIMD1-203ENST00000465039 ATP6V1DQ9Y5K8 247 aa15.33■□□□□ 0.04
LIMD1-203ENST00000465039 ARID2Q68CP9 1835 aa15.32■□□□□ 0.04
LIMD1-203ENST00000465039 MAFO75444 373 aaPredicted RBP15.32■□□□□ 0.04
LIMD1-203ENST00000465039 BAIAP3O94812 1187 aa15.32■□□□□ 0.04
LIMD1-203ENST00000465039 YEATS4O95619 227 aa15.32■□□□□ 0.04
LIMD1-203ENST00000465039 BRD1O95696 1058 aa15.32■□□□□ 0.04
LIMD1-203ENST00000465039 CSF2RAP15509 400 aa15.32■□□□□ 0.04
LIMD1-203ENST00000465039 DNM2P50570 870 aa15.32■□□□□ 0.04
LIMD1-203ENST00000465039 IGBP1P78318 339 aa15.32■□□□□ 0.04
LIMD1-203ENST00000465039 MRPS6P82932 125 aaKnown RBP15.32■□□□□ 0.04
LIMD1-203ENST00000465039 CYP4A11Q02928 519 aa15.32■□□□□ 0.04
LIMD1-203ENST00000465039 PTPAQ15257 358 aa15.32■□□□□ 0.04
LIMD1-203ENST00000465039 ZNF618Q5T7W0 954 aa15.32■□□□□ 0.04
LIMD1-203ENST00000465039 CHRDL2Q6WN34 429 aa15.32■□□□□ 0.04
LIMD1-203ENST00000465039 CATSPER3Q86XQ3 398 aa15.32■□□□□ 0.04
LIMD1-203ENST00000465039 TPH2Q8IWU9 490 aa15.32■□□□□ 0.04
LIMD1-203ENST00000465039 TDHQ8IZJ6 230 aa15.32■□□□□ 0.04
LIMD1-203ENST00000465039 PPP1R13LQ8WUF5 828 aa15.32■□□□□ 0.04
LIMD1-203ENST00000465039 WNT8BQ93098 351 aa15.32■□□□□ 0.04
LIMD1-203ENST00000465039 NT5C3AQ9H0P0 336 aa15.32■□□□□ 0.04
LIMD1-203ENST00000465039 DHX33Q9H6R0 707 aaKnown RBP15.32■□□□□ 0.04
LIMD1-203ENST00000465039 RGL1Q9NZL6 768 aa15.32■□□□□ 0.04
LIMD1-203ENST00000465039 WRAP73Q9P2S5 460 aaPredicted RBP15.32■□□□□ 0.04
LIMD1-203ENST00000465039 UMODL1Q5DID0 1318 aa15.32■□□□□ 0.04
LIMD1-203ENST00000465039 DDX11L8A8MPP1 907 aa15.31■□□□□ 0.04
LIMD1-203ENST00000465039 DGAT1O75907 488 aa15.31■□□□□ 0.04
LIMD1-203ENST00000465039 ACTN1P12814 892 aa15.31■□□□□ 0.04
LIMD1-203ENST00000465039 MGAT3Q09327 533 aa15.31■□□□□ 0.04
LIMD1-203ENST00000465039 SLC39A14Q15043 492 aa15.31■□□□□ 0.04
LIMD1-203ENST00000465039 HYIQ5T013 277 aa15.31■□□□□ 0.04
LIMD1-203ENST00000465039 RASIP1Q5U651 963 aa15.31■□□□□ 0.04
LIMD1-203ENST00000465039 RUFY4Q6ZNE9 571 aa15.31■□□□□ 0.04
LIMD1-203ENST00000465039 KIAA0319LQ8IZA0 1049 aa15.31■□□□□ 0.04
LIMD1-203ENST00000465039 TRAPPC12Q8WVT3 735 aa15.31■□□□□ 0.04
LIMD1-203ENST00000465039 APBB2Q92870 758 aa15.31■□□□□ 0.04
LIMD1-203ENST00000465039 CCDC43Q96MW1 224 aaKnown RBP15.31■□□□□ 0.04
LIMD1-203ENST00000465039 CFAP45Q9UL16 551 aa15.31■□□□□ 0.04
LIMD1-203ENST00000465039 ANP32AP39687 249 aaKnown RBP15.3■□□□□ 0.04
LIMD1-203ENST00000465039 RARRES1P49788 294 aa15.3■□□□□ 0.04
LIMD1-203ENST00000465039 CCL23P55773 120 aa15.3■□□□□ 0.04
LIMD1-203ENST00000465039 NUCB2P80303 420 aa15.3■□□□□ 0.04
LIMD1-203ENST00000465039 CTTNQ14247 550 aaKnown RBP15.3■□□□□ 0.04
LIMD1-203ENST00000465039 ODR4Q5SWX8 454 aa15.3■□□□□ 0.04
LIMD1-203ENST00000465039 CNKSR3Q6P9H4 555 aa15.3■□□□□ 0.04
LIMD1-203ENST00000465039 SNX29Q8TEQ0 813 aa15.3■□□□□ 0.04
LIMD1-203ENST00000465039 DNAJB3Q8WWF6 145 aa15.3■□□□□ 0.04
LIMD1-203ENST00000465039 TCP11Q8WWU5 503 aa15.3■□□□□ 0.04
LIMD1-203ENST00000465039 HERVK_113Q902F9 699 aa15.3■□□□□ 0.04
LIMD1-203ENST00000465039 CEP170P1Q96L14 293 aa15.3■□□□□ 0.04
LIMD1-203ENST00000465039 DAXXQ9UER7 740 aaPredicted RBP15.3■□□□□ 0.04
LIMD1-203ENST00000465039 SRPRBQ9Y5M8 271 aaKnown RBP15.3■□□□□ 0.04
LIMD1-203ENST00000465039 TRPV2Q9Y5S1 764 aa15.3■□□□□ 0.04
LIMD1-203ENST00000465039 VWA3AA6NCI4 1184 aa15.29■□□□□ 0.04
LIMD1-203ENST00000465039 PPP6R2O75170 966 aa15.29■□□□□ 0.04
LIMD1-203ENST00000465039 MED24O75448 989 aa15.29■□□□□ 0.04
LIMD1-203ENST00000465039 DDIT3P35638 169 aa15.29■□□□□ 0.04
LIMD1-203ENST00000465039 CCT6AP40227 531 aaKnown RBP15.29■□□□□ 0.04
LIMD1-203ENST00000465039 POLGP54098 1239 aaPredicted RBP15.29■□□□□ 0.04
LIMD1-203ENST00000465039 MBTPS1Q14703 1052 aa15.29■□□□□ 0.04
LIMD1-203ENST00000465039 IL17AQ16552 155 aa15.29■□□□□ 0.04
LIMD1-203ENST00000465039 LRIT3Q3SXY7 679 aa15.29■□□□□ 0.04
LIMD1-203ENST00000465039 MTERF2Q49AM1 385 aa15.29■□□□□ 0.04
LIMD1-203ENST00000465039 PLEKHG4Q58EX7 1191 aa15.29■□□□□ 0.04
LIMD1-203ENST00000465039 XKR9Q5GH70 373 aa15.29■□□□□ 0.04
LIMD1-203ENST00000465039 TMEM240Q5SV17 173 aa15.29■□□□□ 0.04
LIMD1-203ENST00000465039 EFCAB12Q6NXP0 572 aa15.29■□□□□ 0.04
LIMD1-203ENST00000465039 ZNF410Q86VK4 478 aa15.29■□□□□ 0.04
LIMD1-203ENST00000465039 MCPH1Q8NEM0 835 aa15.29■□□□□ 0.04
LIMD1-203ENST00000465039 KCNG4Q8TDN1 519 aa15.29■□□□□ 0.04
LIMD1-203ENST00000465039 SCLYQ96I15 445 aa15.29■□□□□ 0.04
LIMD1-203ENST00000465039 USP28Q96RU2 1077 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms