RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 SLC10A4Q96EP9 437 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 GPR101Q96P66 508 aaPredicted RBP3.93□□□□□ -1.78
COL8A1-205ENST00000463753 DRC3Q9H069 523 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 NDST4Q9H3R1 872 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 RETREG1Q9H6L5 497 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 FAM114A2Q9NRY5 505 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.93□□□□□ -1.78
COL8A1-205ENST00000463753 TRIM10Q9UDY6 481 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 CFAP45Q9UL16 551 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 CYP46A1Q9Y6A2 500 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 IGF2BP3O00425 579 aaKnown RBP eCLIP3.93□□□□□ -1.78
COL8A1-205ENST00000463753 ZNF185O15231 689 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 SLC26A4O43511 780 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 ATP9BO43861 1147 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 JAK2O60674 1132 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 PENKP01210 267 aaPredicted RBP3.93□□□□□ -1.78
COL8A1-205ENST00000463753 CCDC166P0CW27 439 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 TROVE2P10155 538 aaKnown RBP eCLIP3.93□□□□□ -1.78
COL8A1-205ENST00000463753 IL2RBP14784 551 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 TM4SF4P48230 202 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 LACTBP83111 547 aaPredicted RBP3.93□□□□□ -1.78
COL8A1-205ENST00000463753 TRIM29Q14134 588 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 NCAPHQ15003 741 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 MUM1Q2TAK8 710 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 SH2D4BQ5SQS7 431 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 ZNF362Q5T0B9 420 aaPredicted RBP3.93□□□□□ -1.78
COL8A1-205ENST00000463753 SPECC1LQ69YQ0 1117 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 TRAF7Q6Q0C0 670 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 RUFY4Q6ZNE9 571 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 SCUBE1Q8IWY4 988 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 SLC7A5P1Q8MH63 180 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 CCT6BQ92526 530 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 ATP6V0A1Q93050 837 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 HAUS1Q96CS2 278 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 AGBL1Q96MI9 1066 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 KCTD15Q96SI1 283 aaPredicted RBP3.93□□□□□ -1.78
COL8A1-205ENST00000463753 SH3GL1Q99961 368 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 LBHD1Q9BQE6 289 aaPredicted RBP3.93□□□□□ -1.78
COL8A1-205ENST00000463753 LRRC27Q9C0I9 530 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 PAG1Q9NWQ8 432 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 TIMM22Q9Y584 194 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 NR2E3Q9Y5X4 410 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 GMEB1Q9Y692 573 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 IVNS1ABPQ9Y6Y0 642 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 A0A1W2PQ67 120 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 PPIP5K2O43314 1243 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 PEX14O75381 377 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 TPPPO94811 219 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 GALK1P51570 392 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 NDUFA8P51970 172 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 PSMC1P62191 440 aaKnown RBP3.92□□□□□ -1.78
COL8A1-205ENST00000463753 MYL5Q02045 173 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 TUBB2AQ13885 445 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 ALDH1L2Q3SY69 923 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 LACTB2Q53H82 288 aaPredicted RBP3.92□□□□□ -1.78
COL8A1-205ENST00000463753 INTS6LQ5JSJ4 861 aaKnown RBP3.92□□□□□ -1.78
COL8A1-205ENST00000463753 CFAP157Q5JU67 520 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 CEP85Q6P2H3 762 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 Q6ZVU0 165 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 CLASRPQ8N2M8 674 aaKnown RBP3.92□□□□□ -1.78
COL8A1-205ENST00000463753 AENQ8WTP8 325 aaKnown RBP3.92□□□□□ -1.78
COL8A1-205ENST00000463753 IFT81Q8WYA0 676 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 BRF1Q92994 677 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 NACC2Q96BF6 587 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 MAELQ96JY0 434 aaKnown RBP3.92□□□□□ -1.78
COL8A1-205ENST00000463753 ZSCAN31Q96LW9 406 aaPredicted RBP3.92□□□□□ -1.78
COL8A1-205ENST00000463753 PLEKHF1Q96S99 279 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 TUBB2BQ9BVA1 445 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 PLVAPQ9BX97 442 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 JADE2Q9NQC1 790 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 SH2B1Q9NRF2 756 aaPredicted RBP3.92□□□□□ -1.78
COL8A1-205ENST00000463753 EXOC1Q9NV70 894 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 MTMR10Q9NXD2 777 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 SEL1LQ9UBV2 794 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 ZBTB21Q9ULJ3 1066 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 TRIM33Q9UPN9 1127 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 EMILIN1Q9Y6C2 1016 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 ARAP2Q8WZ64 1704 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 CCT8L1PA6NM43 557 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 AKR1B15C9JRZ8 316 aaPredicted RBP3.92□□□□□ -1.78
COL8A1-205ENST00000463753 J3QL48 77 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 WASLO00401 505 aaPredicted RBP3.92□□□□□ -1.78
COL8A1-205ENST00000463753 GFRA3O60609 400 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 ATP1A1P05023 1023 aaKnown RBP3.92□□□□□ -1.78
COL8A1-205ENST00000463753 KRT16P08779 473 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 GSTT2P0CG29 244 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 GSTT2BP0CG30 244 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 NQO1P15559 274 aaKnown RBP3.92□□□□□ -1.78
COL8A1-205ENST00000463753 KCNA2P16389 499 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 TMPOP42166 694 aaKnown RBP3.92□□□□□ -1.78
COL8A1-205ENST00000463753 CACNA2D1P54289 1103 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 NLRP12P59046 1061 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 NLRP5P59047 1200 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 GSTM4Q03013 218 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 VAC14Q08AM6 782 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 PAK2Q13177 524 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 RIPK1Q13546 671 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 RCN2Q14257 317 aa3.92□□□□□ -1.78
COL8A1-205ENST00000463753 LBRQ14739 615 aaKnown RBP3.92□□□□□ -1.78
COL8A1-205ENST00000463753 CNPY1Q3B7I2 92 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms