RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 GINS2Q9Y248 185 aa23.65■■□□□ 1.38
CPSF7-209ENST00000463244 NOC2LQ9Y3T9 749 aaKnown RBP23.65■■□□□ 1.38
CPSF7-209ENST00000463244 USP15Q9Y4E8 981 aaPredicted RBP23.65■■□□□ 1.38
CPSF7-209ENST00000463244 PCDHB12Q9Y5F1 795 aa23.65■■□□□ 1.38
CPSF7-209ENST00000463244 MYO15AQ9UKN7 3530 aa23.65■■□□□ 1.38
CPSF7-209ENST00000463244 HBP1O60381 514 aa23.64■■□□□ 1.37
CPSF7-209ENST00000463244 RPS6KA5O75582 802 aa23.64■■□□□ 1.37
CPSF7-209ENST00000463244 CCNE2O96020 404 aa23.64■■□□□ 1.37
CPSF7-209ENST00000463244 IBSPP21815 317 aaPredicted RBP23.64■■□□□ 1.37
CPSF7-209ENST00000463244 TRIM67Q6ZTA4 783 aa23.64■■□□□ 1.37
CPSF7-209ENST00000463244 KIAA0319LQ8IZA0 1049 aa23.64■■□□□ 1.37
CPSF7-209ENST00000463244 ATP8B4Q8TF62 1192 aa23.64■■□□□ 1.37
CPSF7-209ENST00000463244 TMEM40Q8WWA1 233 aa23.64■■□□□ 1.37
CPSF7-209ENST00000463244 TLE6Q9H808 572 aa23.64■■□□□ 1.37
CPSF7-209ENST00000463244 CDHR5Q9HBB8 845 aa23.64■■□□□ 1.37
CPSF7-209ENST00000463244 MYH9P35579 1960 aaKnown RBP23.63■■□□□ 1.37
CPSF7-209ENST00000463244 TMEM221A6NGB7 291 aa23.63■■□□□ 1.37
CPSF7-209ENST00000463244 M0R296 226 aa23.63■■□□□ 1.37
CPSF7-209ENST00000463244 SREBF1P36956 1147 aa23.63■■□□□ 1.37
CPSF7-209ENST00000463244 FAM102BQ5T8I3 360 aa23.63■■□□□ 1.37
CPSF7-209ENST00000463244 ABHD15Q6UXT9 468 aa23.63■■□□□ 1.37
CPSF7-209ENST00000463244 MICAL1Q8TDZ2 1067 aa23.63■■□□□ 1.37
CPSF7-209ENST00000463244 CFAP54Q96N23 3096 aa23.63■■□□□ 1.37
CPSF7-209ENST00000463244 ADAM2Q99965 735 aa23.63■■□□□ 1.37
CPSF7-209ENST00000463244 TLR9Q9NR96 1032 aa23.63■■□□□ 1.37
CPSF7-209ENST00000463244 AAASQ9NRG9 546 aa23.63■■□□□ 1.37
CPSF7-209ENST00000463244 RGS18Q9NS28 235 aa23.63■■□□□ 1.37
CPSF7-209ENST00000463244 C1orf112Q9NSG2 853 aa23.63■■□□□ 1.37
CPSF7-209ENST00000463244 RBM28Q9NW13 759 aaKnown RBP23.63■■□□□ 1.37
CPSF7-209ENST00000463244 RNF216Q9NWF9 866 aaPredicted RBP23.63■■□□□ 1.37
CPSF7-209ENST00000463244 COL1A2P08123 1366 aa23.63■■□□□ 1.37
CPSF7-209ENST00000463244 DENND3A2RUS2 1198 aa23.62■■□□□ 1.37
CPSF7-209ENST00000463244 TBKBP1A7MCY6 615 aa23.62■■□□□ 1.37
CPSF7-209ENST00000463244 BACH1O14867 736 aa23.62■■□□□ 1.37
CPSF7-209ENST00000463244 ADCY7P51828 1080 aa23.62■■□□□ 1.37
CPSF7-209ENST00000463244 ZXDAP98168 799 aa23.62■■□□□ 1.37
CPSF7-209ENST00000463244 FUT2Q10981 343 aa23.62■■□□□ 1.37
CPSF7-209ENST00000463244 SPOUT1Q5T280 376 aaKnown RBP23.62■■□□□ 1.37
CPSF7-209ENST00000463244 FAM160B1Q5W0V3 765 aa23.62■■□□□ 1.37
CPSF7-209ENST00000463244 APOA5Q6Q788 366 aa23.62■■□□□ 1.37
CPSF7-209ENST00000463244 SYNE3Q6ZMZ3 975 aa23.62■■□□□ 1.37
CPSF7-209ENST00000463244 SLC24A5Q71RS6 500 aa23.62■■□□□ 1.37
CPSF7-209ENST00000463244 CCDC60Q8IWA6 550 aaPredicted RBP23.62■■□□□ 1.37
CPSF7-209ENST00000463244 PBXIP1Q96AQ6 731 aa23.62■■□□□ 1.37
CPSF7-209ENST00000463244 ESYT1Q9BSJ8 1104 aa23.62■■□□□ 1.37
CPSF7-209ENST00000463244 PHF7Q9BWX1 381 aaPredicted RBP23.62■■□□□ 1.37
CPSF7-209ENST00000463244 ST3GAL5Q9UNP4 418 aa23.62■■□□□ 1.37
CPSF7-209ENST00000463244 FSD2A1L4K1 749 aa23.61■■□□□ 1.37
CPSF7-209ENST00000463244 C9IYK1 514 aa23.61■■□□□ 1.37
CPSF7-209ENST00000463244 hCG_1984214I3L0E3 225 aa23.61■■□□□ 1.37
CPSF7-209ENST00000463244 DDX39AO00148 427 aaKnown RBP23.61■■□□□ 1.37
CPSF7-209ENST00000463244 PER2O15055 1255 aa23.61■■□□□ 1.37
CPSF7-209ENST00000463244 FGF18O76093 207 aa23.61■■□□□ 1.37
CPSF7-209ENST00000463244 RBM10P98175 930 aaKnown RBP23.61■■□□□ 1.37
CPSF7-209ENST00000463244 AP3B2Q13367 1082 aa23.61■■□□□ 1.37
CPSF7-209ENST00000463244 ODR4Q5SWX8 454 aa23.61■■□□□ 1.37
CPSF7-209ENST00000463244 NIPA1Q7RTP0 329 aa23.61■■□□□ 1.37
CPSF7-209ENST00000463244 ZNF713Q8N859 430 aaPredicted RBP23.61■■□□□ 1.37
CPSF7-209ENST00000463244 PRSS33Q8NF86 280 aa23.61■■□□□ 1.37
CPSF7-209ENST00000463244 VN1R2Q8NFZ6 395 aa23.61■■□□□ 1.37
CPSF7-209ENST00000463244 SUSD6Q92537 303 aa23.61■■□□□ 1.37
CPSF7-209ENST00000463244 CDCA3Q99618 268 aaPredicted RBP23.61■■□□□ 1.37
CPSF7-209ENST00000463244 HCSTQ9UBK5 93 aa23.61■■□□□ 1.37
CPSF7-209ENST00000463244 SMCO2A6NFE2 343 aa23.6■■□□□ 1.37
CPSF7-209ENST00000463244 ZBTB42B2RXF5 422 aa23.6■■□□□ 1.37
CPSF7-209ENST00000463244 GPR182O15218 404 aa23.6■■□□□ 1.37
CPSF7-209ENST00000463244 ATF7P17544 494 aaPredicted RBP23.6■■□□□ 1.37
CPSF7-209ENST00000463244 CLK2P49760 499 aaKnown RBP23.6■■□□□ 1.37
CPSF7-209ENST00000463244 ERVFC1P60507 584 aa23.6■■□□□ 1.37
CPSF7-209ENST00000463244 PKN1Q16512 942 aa23.6■■□□□ 1.37
CPSF7-209ENST00000463244 DUSP6Q16828 381 aa23.6■■□□□ 1.37
CPSF7-209ENST00000463244 ZNF484Q5JVG2 852 aa23.6■■□□□ 1.37
CPSF7-209ENST00000463244 GLT8D2Q9H1C3 349 aa23.6■■□□□ 1.37
CPSF7-209ENST00000463244 ZNF302Q9NR11 478 aa23.6■■□□□ 1.37
CPSF7-209ENST00000463244 TYW1Q9NV66 732 aaKnown RBP23.6■■□□□ 1.37
CPSF7-209ENST00000463244 TMEM260Q9NX78 707 aa23.6■■□□□ 1.37
CPSF7-209ENST00000463244 BARHL2Q9NY43 387 aa23.6■■□□□ 1.37
CPSF7-209ENST00000463244 KMT2EQ8IZD2 1858 aa23.6■■□□□ 1.37
CPSF7-209ENST00000463244 FAM86B1E9PN63 330 aa23.59■■□□□ 1.37
CPSF7-209ENST00000463244 FSCN2O14926 492 aa23.59■■□□□ 1.37
CPSF7-209ENST00000463244 DHX15O43143 795 aaKnown RBP23.59■■□□□ 1.37
CPSF7-209ENST00000463244 FAM86B2P0C5J1 330 aa23.59■■□□□ 1.37
CPSF7-209ENST00000463244 ZNF76P36508 570 aa23.59■■□□□ 1.37
CPSF7-209ENST00000463244 RTN1Q16799 776 aa23.59■■□□□ 1.37
CPSF7-209ENST00000463244 IER5LQ5T953 404 aa23.59■■□□□ 1.37
CPSF7-209ENST00000463244 PDXDC2PQ6P474 469 aa23.59■■□□□ 1.37
CPSF7-209ENST00000463244 THNSL1Q8IYQ7 743 aa23.59■■□□□ 1.37
CPSF7-209ENST00000463244 COLGALT1Q8NBJ5 622 aa23.59■■□□□ 1.37
CPSF7-209ENST00000463244 RPGRIP1Q96KN7 1286 aa23.59■■□□□ 1.37
CPSF7-209ENST00000463244 TMEM161AQ9NX61 479 aa23.59■■□□□ 1.37
CPSF7-209ENST00000463244 V9GY48 417 aaPredicted RBP23.59■■□□□ 1.37
CPSF7-209ENST00000463244 DMDP11532 3685 aa23.58■■□□□ 1.37
CPSF7-209ENST00000463244 C22orf31O95567 290 aa23.58■■□□□ 1.37
CPSF7-209ENST00000463244 ATP4AP20648 1035 aa23.58■■□□□ 1.37
CPSF7-209ENST00000463244 CRYBB1P53674 252 aaPredicted RBP23.58■■□□□ 1.37
CPSF7-209ENST00000463244 FAM189BP81408 668 aa23.58■■□□□ 1.37
CPSF7-209ENST00000463244 KIZQ2M2Z5 673 aa23.58■■□□□ 1.37
CPSF7-209ENST00000463244 PDE12Q6L8Q7 609 aaKnown RBP23.58■■□□□ 1.37
CPSF7-209ENST00000463244 MIS18BP1Q6P0N0 1132 aa23.58■■□□□ 1.37
CPSF7-209ENST00000463244 FAM228AQ86W67 206 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms