RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 FAM193BQ96PV7 902 aaPredicted RBP4.79□□□□□ -1.64
GPNMB-205ENST00000463011 MYD88Q99836 296 aa4.79□□□□□ -1.64
GPNMB-205ENST00000463011 G6PC3Q9BUM1 346 aa4.79□□□□□ -1.64
GPNMB-205ENST00000463011 METTL22Q9BUU2 404 aaPredicted RBP4.79□□□□□ -1.64
GPNMB-205ENST00000463011 POFUT1Q9H488 388 aa4.79□□□□□ -1.64
GPNMB-205ENST00000463011 NLRC4Q9NPP4 1024 aa4.79□□□□□ -1.64
GPNMB-205ENST00000463011 EBF1Q9UH73 591 aa4.79□□□□□ -1.64
GPNMB-205ENST00000463011 NUB1Q9Y5A7 615 aa4.79□□□□□ -1.64
GPNMB-205ENST00000463011 PCDHGB6Q9Y5F9 930 aa4.79□□□□□ -1.64
GPNMB-205ENST00000463011 PPP2R3BQ9Y5P8 575 aa4.79□□□□□ -1.64
GPNMB-205ENST00000463011 SNX11Q9Y5W9 270 aa4.79□□□□□ -1.64
GPNMB-205ENST00000463011 KRTAP4-8A0A0G2JLE6 195 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 HGSO14964 777 aaPredicted RBP4.78□□□□□ -1.64
GPNMB-205ENST00000463011 MAFKO60675 156 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 PQBP1O60828 265 aaKnown RBP4.78□□□□□ -1.64
GPNMB-205ENST00000463011 USP2O75604 605 aaPredicted RBP4.78□□□□□ -1.64
GPNMB-205ENST00000463011 APOL3O95236 402 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 SLC5A1P13866 664 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 SDHAP31040 664 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 GJA4P35212 333 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 CHRNA4P43681 627 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 NFIAQ12857 509 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 LONRF1Q17RB8 773 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 KIAA0753Q2KHM9 967 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 ZBTB41Q5SVQ8 909 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 ANO1Q5XXA6 986 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 PRR23CQ6ZRP0 262 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 USP45Q70EL2 814 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.78□□□□□ -1.64
GPNMB-205ENST00000463011 SLCO6A1Q86UG4 719 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 NME9Q86XW9 330 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 PHYKPLQ8IUZ5 450 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 IFNL2Q8IZJ0 200 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 THEMISQ8N1K5 641 aaPredicted RBP4.78□□□□□ -1.64
GPNMB-205ENST00000463011 CAMKK1Q8N5S9 505 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 C7orf31Q8N865 590 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 MYRIPQ8NFW9 859 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 CLEC4DQ8WXI8 215 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 COA7Q96BR5 231 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 C1GALT1C1Q96EU7 318 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 GBP4Q96PP9 640 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 KRTAP9-9Q9BYP9 154 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 SMOC1Q9H4F8 434 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 PRDM12Q9H4Q4 367 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 GNL3LQ9NVN8 582 aaKnown RBP4.78□□□□□ -1.64
GPNMB-205ENST00000463011 FNIP2Q9P278 1114 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 IMPACTQ9P2X3 320 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 PNMA2Q9UL42 364 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 DMTF1Q9Y222 760 aa4.78□□□□□ -1.64
GPNMB-205ENST00000463011 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.77□□□□□ -1.65
GPNMB-205ENST00000463011 CYP26A1O43174 497 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 TADA3O75528 432 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 TUSC2O75896 110 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 PRPF6O94906 941 aaKnown RBP4.77□□□□□ -1.65
GPNMB-205ENST00000463011 FGAP02671 866 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 MMEP08473 750 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 MSL3P1P0C860 447 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 MTHFD2P13995 350 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 ALDH5A1P51649 535 aaPredicted RBP4.77□□□□□ -1.65
GPNMB-205ENST00000463011 SLC5A3P53794 718 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 EPHA5P54756 1037 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 RTP1P59025 263 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 CCT2P78371 535 aaKnown RBP4.77□□□□□ -1.65
GPNMB-205ENST00000463011 MRPS9P82933 396 aaKnown RBP4.77□□□□□ -1.65
GPNMB-205ENST00000463011 CDK17Q00537 523 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 MVKQ03426 396 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 GRIN1Q05586 938 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 DUSP4Q13115 394 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 STK3Q13188 491 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 RAPGEF1Q13905 1077 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 KIR3DS1Q14943 382 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 AOC3Q16853 763 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 HSF5Q4G112 596 aaPredicted RBP4.77□□□□□ -1.65
GPNMB-205ENST00000463011 EMC4Q5J8M3 183 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 XRRA1Q6P2D8 792 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 CEP128Q6ZU80 1094 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 DENND1CQ8IV53 801 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 ACRBPQ8NEB7 543 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 ASB15Q8WXK1 588 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 LINC01599Q8WXQ3 324 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 AUTS2Q8WXX7 1259 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 FERMT2Q96AC1 680 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 ASIC4Q96FT7 647 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 RAX2Q96IS3 184 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 TUBGCP5Q96RT8 1024 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 TBCBQ99426 244 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 DBNDD2Q9BQY9 259 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 MYL10Q9BUA6 226 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 APOL5Q9BWW9 433 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.77□□□□□ -1.65
GPNMB-205ENST00000463011 MAF1Q9H063 256 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 ADAMTS10Q9H324 1103 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 KCTD10Q9H3F6 313 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 RC3H2Q9HBD1 1191 aaKnown RBP4.77□□□□□ -1.65
GPNMB-205ENST00000463011 IFT122Q9HBG6 1241 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 MYOTQ9UBF9 498 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 ASH2LQ9UBL3 628 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 DPP7Q9UHL4 492 aa4.77□□□□□ -1.65
GPNMB-205ENST00000463011 SIT1Q9Y3P8 196 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms