RNA–Protein interactions for RNA: ENST00000462817.5

LIMS1-211, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 4

Gene LIMS1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-211ENST00000462817 LINC01553A4QN01 128 aa17.48■□□□□ 0.39
LIMS1-211ENST00000462817 PSMD10O75832 226 aa17.48■□□□□ 0.39
LIMS1-211ENST00000462817 OATP04181 439 aa17.48■□□□□ 0.39
LIMS1-211ENST00000462817 GCFC2P16383 781 aaKnown RBP17.48■□□□□ 0.39
LIMS1-211ENST00000462817 ODR4Q5SWX8 454 aa17.48■□□□□ 0.39
LIMS1-211ENST00000462817 NSUN7Q8NE18 718 aaKnown RBP17.48■□□□□ 0.39
LIMS1-211ENST00000462817 OXER1Q8TDS5 423 aa17.48■□□□□ 0.39
LIMS1-211ENST00000462817 PTPRSQ13332 1948 aa17.48■□□□□ 0.39
LIMS1-211ENST00000462817 IGSF9BQ9UPX0 1349 aa17.47■□□□□ 0.39
LIMS1-211ENST00000462817 ENPP3O14638 875 aa17.47■□□□□ 0.39
LIMS1-211ENST00000462817 BAG4O95429 457 aaKnown RBP17.47■□□□□ 0.39
LIMS1-211ENST00000462817 FDPSP14324 419 aaKnown RBP17.47■□□□□ 0.39
LIMS1-211ENST00000462817 HTRA4P83105 476 aaPredicted RBP17.47■□□□□ 0.39
LIMS1-211ENST00000462817 PRKCEQ02156 737 aa17.47■□□□□ 0.39
LIMS1-211ENST00000462817 NFX1Q12986 1120 aaKnown RBP17.47■□□□□ 0.39
LIMS1-211ENST00000462817 MKRN4PQ13434 485 aaPredicted RBP17.47■□□□□ 0.39
LIMS1-211ENST00000462817 PPP4R3AQ6IN85 833 aa17.47■□□□□ 0.39
LIMS1-211ENST00000462817 KIAA0319LQ8IZA0 1049 aa17.47■□□□□ 0.39
LIMS1-211ENST00000462817 MBOAT7Q96N66 472 aa17.47■□□□□ 0.39
LIMS1-211ENST00000462817 MAP7D2Q96T17 732 aa17.47■□□□□ 0.39
LIMS1-211ENST00000462817 PPP1R16BQ96T49 567 aa17.47■□□□□ 0.39
LIMS1-211ENST00000462817 AGO3Q9H9G7 860 aaKnown RBP17.47■□□□□ 0.39
LIMS1-211ENST00000462817 UPF2Q9HAU5 1272 aaKnown RBP17.47■□□□□ 0.39
LIMS1-211ENST00000462817 PADI3Q9ULW8 664 aa17.47■□□□□ 0.39
LIMS1-211ENST00000462817 AKT3Q9Y243 479 aa17.47■□□□□ 0.39
LIMS1-211ENST00000462817 EPOPA6NHQ4 379 aa17.46■□□□□ 0.39
LIMS1-211ENST00000462817 SLC37A4O43826 429 aa17.46■□□□□ 0.39
LIMS1-211ENST00000462817 JAK2O60674 1132 aa17.46■□□□□ 0.39
LIMS1-211ENST00000462817 RPS6KA5O75582 802 aa17.46■□□□□ 0.39
LIMS1-211ENST00000462817 C22orf31O95567 290 aa17.46■□□□□ 0.39
LIMS1-211ENST00000462817 IBSPP21815 317 aaPredicted RBP17.46■□□□□ 0.39
LIMS1-211ENST00000462817 ERVK-21P61565 698 aa17.46■□□□□ 0.39
LIMS1-211ENST00000462817 TBC1D8BQ0IIM8 1120 aa17.46■□□□□ 0.39
LIMS1-211ENST00000462817 GRB10Q13322 594 aa17.46■□□□□ 0.39
LIMS1-211ENST00000462817 SAFBQ15424 915 aaKnown RBP eCLIP17.46■□□□□ 0.39
LIMS1-211ENST00000462817 C8orf34Q49A92 452 aa17.46■□□□□ 0.39
LIMS1-211ENST00000462817 EFCAB12Q6NXP0 572 aa17.46■□□□□ 0.39
LIMS1-211ENST00000462817 SPRED2Q7Z698 418 aa17.46■□□□□ 0.39
LIMS1-211ENST00000462817 CCDC83Q8IWF9 413 aa17.46■□□□□ 0.39
LIMS1-211ENST00000462817 FBXO22Q8NEZ5 403 aa17.46■□□□□ 0.39
LIMS1-211ENST00000462817 ETNPPLQ8TBG4 499 aa17.46■□□□□ 0.39
LIMS1-211ENST00000462817 ZSCAN31Q96LW9 406 aaPredicted RBP17.46■□□□□ 0.39
LIMS1-211ENST00000462817 FAM20AQ96MK3 541 aa17.46■□□□□ 0.39
LIMS1-211ENST00000462817 SAMD11Q96NU1 681 aa17.46■□□□□ 0.39
LIMS1-211ENST00000462817 SUGCTQ9HAC7 445 aa17.46■□□□□ 0.39
LIMS1-211ENST00000462817 SEPT9Q9UHD8 586 aaPredicted RBP17.46■□□□□ 0.39
LIMS1-211ENST00000462817 MTCH2Q9Y6C9 303 aa17.46■□□□□ 0.39
LIMS1-211ENST00000462817 KDM3AQ9Y4C1 1321 aa17.46■□□□□ 0.38
LIMS1-211ENST00000462817 ZBTB42B2RXF5 422 aa17.45■□□□□ 0.38
LIMS1-211ENST00000462817 ZNF862O60290 1169 aa17.45■□□□□ 0.38
LIMS1-211ENST00000462817 DKC1O60832 514 aaKnown RBP eCLIP17.45■□□□□ 0.38
LIMS1-211ENST00000462817 NR5A1Q13285 461 aa17.45■□□□□ 0.38
LIMS1-211ENST00000462817 UGCGQ16739 394 aa17.45■□□□□ 0.38
LIMS1-211ENST00000462817 KIZQ2M2Z5 673 aa17.45■□□□□ 0.38
LIMS1-211ENST00000462817 TMEM266Q2M3C6 531 aa17.45■□□□□ 0.38
LIMS1-211ENST00000462817 FIBCD1Q8N539 461 aa17.45■□□□□ 0.38
LIMS1-211ENST00000462817 GDPD5Q8WTR4 605 aa17.45■□□□□ 0.38
LIMS1-211ENST00000462817 SCLT1Q96NL6 688 aa17.45■□□□□ 0.38
LIMS1-211ENST00000462817 C17orf80Q9BSJ5 609 aa17.45■□□□□ 0.38
LIMS1-211ENST00000462817 THEGQ9P2T0 379 aa17.45■□□□□ 0.38
LIMS1-211ENST00000462817 LRFN2Q9ULH4 789 aa17.45■□□□□ 0.38
LIMS1-211ENST00000462817 EVPLQ92817 2033 aa17.45■□□□□ 0.38
LIMS1-211ENST00000462817 CHD7Q9P2D1 2997 aa17.44■□□□□ 0.38
LIMS1-211ENST00000462817 DENND3A2RUS2 1198 aa17.44■□□□□ 0.38
LIMS1-211ENST00000462817 DDX11L8A8MPP1 907 aa17.44■□□□□ 0.38
LIMS1-211ENST00000462817 GPR182O15218 404 aa17.44■□□□□ 0.38
LIMS1-211ENST00000462817 MMP1P03956 469 aa17.44■□□□□ 0.38
LIMS1-211ENST00000462817 VTNP04004 478 aa17.44■□□□□ 0.38
LIMS1-211ENST00000462817 STAG3L1P0CL83 205 aa17.44■□□□□ 0.38
LIMS1-211ENST00000462817 CLCN3P51790 818 aa17.44■□□□□ 0.38
LIMS1-211ENST00000462817 CRYBB1P53674 252 aaPredicted RBP17.44■□□□□ 0.38
LIMS1-211ENST00000462817 MTERF2Q49AM1 385 aa17.44■□□□□ 0.38
LIMS1-211ENST00000462817 XKR3Q5GH77 459 aa17.44■□□□□ 0.38
LIMS1-211ENST00000462817 KRT40Q6A162 431 aa17.44■□□□□ 0.38
LIMS1-211ENST00000462817 DIS3L2Q8IYB7 885 aaKnown RBP17.44■□□□□ 0.38
LIMS1-211ENST00000462817 SLFN12Q8IYM2 578 aa17.44■□□□□ 0.38
LIMS1-211ENST00000462817 LRRC71Q8N4P6 559 aa17.44■□□□□ 0.38
LIMS1-211ENST00000462817 IL27Q8NEV9 243 aa17.44■□□□□ 0.38
LIMS1-211ENST00000462817 OSMRQ99650 979 aa17.44■□□□□ 0.38
LIMS1-211ENST00000462817 A0A0C4DFX4 3053 aa17.44■□□□□ 0.38
LIMS1-211ENST00000462817 SIP14410 1827 aa17.43■□□□□ 0.38
LIMS1-211ENST00000462817 BTBD18B2RXH4 712 aa17.43■□□□□ 0.38
LIMS1-211ENST00000462817 TBX3O15119 743 aa17.43■□□□□ 0.38
LIMS1-211ENST00000462817 POU3F3P20264 500 aaPredicted RBP17.43■□□□□ 0.38
LIMS1-211ENST00000462817 DNM2P50570 870 aa17.43■□□□□ 0.38
LIMS1-211ENST00000462817 NLRP11P59045 1033 aaKnown RBP17.43■□□□□ 0.38
LIMS1-211ENST00000462817 PSMC5P62195 406 aa17.43■□□□□ 0.38
LIMS1-211ENST00000462817 GNL2Q13823 731 aaKnown RBP17.43■□□□□ 0.38
LIMS1-211ENST00000462817 BTG3Q14201 252 aaPredicted RBP17.43■□□□□ 0.38
LIMS1-211ENST00000462817 FAM43BQ6ZT52 329 aaPredicted RBP17.43■□□□□ 0.38
LIMS1-211ENST00000462817 ZNF710Q8N1W2 664 aa17.43■□□□□ 0.38
LIMS1-211ENST00000462817 FAM184AQ8NB25 1140 aa17.43■□□□□ 0.38
LIMS1-211ENST00000462817 BANK1Q8NDB2 785 aa17.43■□□□□ 0.38
LIMS1-211ENST00000462817 SP7Q8TDD2 431 aaPredicted RBP17.43■□□□□ 0.38
LIMS1-211ENST00000462817 CDHR5Q9HBB8 845 aa17.43■□□□□ 0.38
LIMS1-211ENST00000462817 KCNMB3Q9NPA1 279 aa17.43■□□□□ 0.38
LIMS1-211ENST00000462817 PRDM6Q9NQX0 595 aa17.43■□□□□ 0.38
LIMS1-211ENST00000462817 SH2B1Q9NRF2 756 aaPredicted RBP17.43■□□□□ 0.38
LIMS1-211ENST00000462817 RNF216Q9NWF9 866 aaPredicted RBP17.43■□□□□ 0.38
LIMS1-211ENST00000462817 NOC2LQ9Y3T9 749 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms