RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 BRF1Q92994 677 aa10□□□□□ -0.81
SOX2-OT-202ENST00000461063 JAKMIP1Q96N16 626 aaKnown RBP10□□□□□ -0.81
SOX2-OT-202ENST00000461063 C11orf84Q9BUA3 381 aaPredicted RBP10□□□□□ -0.81
SOX2-OT-202ENST00000461063 FTHL17Q9BXU8 183 aa10□□□□□ -0.81
SOX2-OT-202ENST00000461063 CELF4Q9BZC1 486 aaKnown RBP10□□□□□ -0.81
SOX2-OT-202ENST00000461063 ZMYND12Q9H0C1 365 aa10□□□□□ -0.81
SOX2-OT-202ENST00000461063 NSUN3Q9H649 340 aaKnown RBP10□□□□□ -0.81
SOX2-OT-202ENST00000461063 RWDD3Q9Y3V2 267 aa10□□□□□ -0.81
SOX2-OT-202ENST00000461063 SNX14Q9Y5W7 946 aa10□□□□□ -0.81
SOX2-OT-202ENST00000461063 TCF20Q9UGU0 1960 aaKnown RBP10□□□□□ -0.81
SOX2-OT-202ENST00000461063 IGSF9BQ9UPX0 1349 aa10□□□□□ -0.81
SOX2-OT-202ENST00000461063 KDM3AQ9Y4C1 1321 aa10□□□□□ -0.81
SOX2-OT-202ENST00000461063 NID2Q14112 1375 aa10□□□□□ -0.81
SOX2-OT-202ENST00000461063 BRWD1Q9NSI6 2320 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 GRXCR2A6NFK2 248 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 ZBTB42B2RXF5 422 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 H3BQ06 376 aaPredicted RBP9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 M0QZ92 97 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 IPO5O00410 1097 aaKnown RBP9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 PRPF3O43395 683 aaKnown RBP9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 HBP1O60381 514 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 IL9P15248 144 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 ATP4AP20648 1035 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 KLRC1P26715 233 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 KRT76Q01546 638 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 PAK2Q13177 524 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 FAM160B1Q5W0V3 765 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 MCTP2Q6DN12 878 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 PTCRAQ6ISU1 281 aaPredicted RBP9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 SWSAP1Q6NVH7 229 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 MIS18BP1Q6P0N0 1132 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 PDXDC2PQ6P474 469 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 BLOC1S2Q6QNY1 142 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 NPAS4Q8IUM7 802 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 FAM178BQ8IXR5 827 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 KIAA0319LQ8IZA0 1049 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 REXO1Q8N1G1 1221 aaKnown RBP9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 FBXL16Q8N461 479 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 PHKBQ93100 1093 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 PABPC5Q96DU9 382 aaKnown RBP9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 UIMC1Q96RL1 719 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 AGXT2Q9BYV1 514 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 LMAN2LQ9H0V9 348 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 TMX1Q9H3N1 280 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 CDHR5Q9HBB8 845 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 C6orf50Q9HD87 102 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 ZNF302Q9NR11 478 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 BOLA1Q9Y3E2 137 aa9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 MRPL42Q9Y6G3 142 aaKnown RBP9.99□□□□□ -0.81
SOX2-OT-202ENST00000461063 PI4K2BG5E9Z4 385 aa9.98□□□□□ -0.81
SOX2-OT-202ENST00000461063 PPFIA3O75145 1194 aa9.98□□□□□ -0.81
SOX2-OT-202ENST00000461063 RPS6KB1P23443 525 aa9.98□□□□□ -0.81
SOX2-OT-202ENST00000461063 SETQ01105 290 aaPredicted RBP9.98□□□□□ -0.81
SOX2-OT-202ENST00000461063 NTRK3Q16288 839 aa9.98□□□□□ -0.81
SOX2-OT-202ENST00000461063 TMEM266Q2M3C6 531 aa9.98□□□□□ -0.81
SOX2-OT-202ENST00000461063 PUS10Q3MIT2 529 aaKnown RBP9.98□□□□□ -0.81
SOX2-OT-202ENST00000461063 ZNF484Q5JVG2 852 aa9.98□□□□□ -0.81
SOX2-OT-202ENST00000461063 CMTR2Q8IYT2 770 aaKnown RBP9.98□□□□□ -0.81
SOX2-OT-202ENST00000461063 GJD3Q8N144 294 aa9.98□□□□□ -0.81
SOX2-OT-202ENST00000461063 CCDC12Q8WUD4 166 aaPredicted RBP9.98□□□□□ -0.81
SOX2-OT-202ENST00000461063 ZNF577Q9BSK1 485 aa9.98□□□□□ -0.81
SOX2-OT-202ENST00000461063 PLVAPQ9BX97 442 aa9.98□□□□□ -0.81
SOX2-OT-202ENST00000461063 ALG13Q9NP73 1137 aaKnown RBP9.98□□□□□ -0.81
SOX2-OT-202ENST00000461063 TBC1D22BQ9NU19 505 aa9.98□□□□□ -0.81
SOX2-OT-202ENST00000461063 NOC2LQ9Y3T9 749 aaKnown RBP9.98□□□□□ -0.81
SOX2-OT-202ENST00000461063 MAFBQ9Y5Q3 323 aaPredicted RBP9.98□□□□□ -0.81
SOX2-OT-202ENST00000461063 COL1A2P08123 1366 aa9.98□□□□□ -0.81
SOX2-OT-202ENST00000461063 NCK2O43639 380 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 C22orf31O95567 290 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 MMP1P03956 469 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 STAG3L1P0CL83 205 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 GNA11P29992 359 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 CIITAP33076 1130 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 LTBRP36941 435 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 GATMP50440 423 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 HYAL1Q12794 435 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 CAMK1Q14012 370 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 CTC1Q2NKJ3 1217 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 PAN2Q504Q3 1202 aaKnown RBP9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 PRR16Q569H4 304 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 ZNF746Q6NUN9 644 aaPredicted RBP9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 EP400NLQ6ZTU2 488 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 CKAP2LQ8IYA6 745 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 SMAP1Q8IYB5 467 aaPredicted RBP9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 BICD2Q8TD16 824 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 RASGRP4Q8TDF6 673 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 TMEM40Q8WWA1 233 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 P2RX5Q93086 422 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 LENG9Q96B70 501 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 LRFN3Q9BTN0 628 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 RNF26Q9BY78 433 aaPredicted RBP9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 ERVK-5Q9HDB9 667 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 C11orf16Q9NQ32 467 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 CLDND1Q9NY35 253 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 PLAGL2Q9UPG8 496 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 GINS2Q9Y248 185 aa9.97□□□□□ -0.81
SOX2-OT-202ENST00000461063 RIOK3O14730 519 aaKnown RBP9.96□□□□□ -0.82
SOX2-OT-202ENST00000461063 EDIL3O43854 480 aa9.96□□□□□ -0.82
SOX2-OT-202ENST00000461063 MGEA5O60502 916 aa9.96□□□□□ -0.82
SOX2-OT-202ENST00000461063 GPR37L1O60883 481 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms