RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 ETNPPLQ8TBG4 499 aa23.95■■□□□ 1.42
HMGB3-205ENST00000455596 YME1L1Q96TA2 773 aa23.95■■□□□ 1.42
HMGB3-205ENST00000455596 AGO3Q9H9G7 860 aaKnown RBP23.95■■□□□ 1.42
HMGB3-205ENST00000455596 DLL1O00548 723 aa23.94■■□□□ 1.42
HMGB3-205ENST00000455596 C22orf31O95567 290 aa23.94■■□□□ 1.42
HMGB3-205ENST00000455596 GCFC2P16383 781 aaKnown RBP23.94■■□□□ 1.42
HMGB3-205ENST00000455596 CD52P31358 61 aa23.94■■□□□ 1.42
HMGB3-205ENST00000455596 ERVK-21P61565 698 aa23.94■■□□□ 1.42
HMGB3-205ENST00000455596 PIK3AP1Q6ZUJ8 805 aa23.94■■□□□ 1.42
HMGB3-205ENST00000455596 MIER3Q7Z3K6 550 aa23.94■■□□□ 1.42
HMGB3-205ENST00000455596 MICALL1Q8N3F8 863 aa23.94■■□□□ 1.42
HMGB3-205ENST00000455596 SP7Q8TDD2 431 aaPredicted RBP23.94■■□□□ 1.42
HMGB3-205ENST00000455596 OXER1Q8TDS5 423 aa23.94■■□□□ 1.42
HMGB3-205ENST00000455596 NAP1L4Q99733 375 aaKnown RBP23.94■■□□□ 1.42
HMGB3-205ENST00000455596 BRMS1Q9HCU9 246 aa23.94■■□□□ 1.42
HMGB3-205ENST00000455596 NRBP2Q9NSY0 501 aa23.94■■□□□ 1.42
HMGB3-205ENST00000455596 SLC37A4O43826 429 aa23.93■■□□□ 1.42
HMGB3-205ENST00000455596 OATP04181 439 aa23.93■■□□□ 1.42
HMGB3-205ENST00000455596 KRT2P35908 639 aa23.93■■□□□ 1.42
HMGB3-205ENST00000455596 PRKCEQ02156 737 aa23.93■■□□□ 1.42
HMGB3-205ENST00000455596 PPP4R3AQ6IN85 833 aa23.93■■□□□ 1.42
HMGB3-205ENST00000455596 KIAA0319LQ8IZA0 1049 aa23.93■■□□□ 1.42
HMGB3-205ENST00000455596 FTHL17Q9BXU8 183 aa23.93■■□□□ 1.42
HMGB3-205ENST00000455596 MTUS1Q9ULD2 1270 aa23.93■■□□□ 1.42
HMGB3-205ENST00000455596 MTCH2Q9Y6C9 303 aa23.93■■□□□ 1.42
HMGB3-205ENST00000455596 ENPP3O14638 875 aa23.92■■□□□ 1.42
HMGB3-205ENST00000455596 MAGEB2O15479 319 aa23.92■■□□□ 1.42
HMGB3-205ENST00000455596 ZNF862O60290 1169 aa23.92■■□□□ 1.42
HMGB3-205ENST00000455596 PAK2Q13177 524 aa23.92■■□□□ 1.42
HMGB3-205ENST00000455596 GRB10Q13322 594 aa23.92■■□□□ 1.42
HMGB3-205ENST00000455596 UGCGQ16739 394 aa23.92■■□□□ 1.42
HMGB3-205ENST00000455596 B3GNT9Q6UX72 402 aa23.92■■□□□ 1.42
HMGB3-205ENST00000455596 METTL13Q8N6R0 699 aa23.92■■□□□ 1.42
HMGB3-205ENST00000455596 PADI3Q9ULW8 664 aa23.92■■□□□ 1.42
HMGB3-205ENST00000455596 LIMCH1Q9UPQ0 1083 aa23.92■■□□□ 1.42
HMGB3-205ENST00000455596 GINS2Q9Y248 185 aa23.92■■□□□ 1.42
HMGB3-205ENST00000455596 CCNT1O60563 726 aaKnown RBP23.91■■□□□ 1.42
HMGB3-205ENST00000455596 PRDM6Q9NQX0 595 aa23.91■■□□□ 1.42
HMGB3-205ENST00000455596 EYSQ5T1H1 3165 aa23.91■■□□□ 1.42
HMGB3-205ENST00000455596 PRRC2BQ5JSZ5 2229 aaKnown RBP23.91■■□□□ 1.42
HMGB3-205ENST00000455596 CHD7Q9P2D1 2997 aa23.91■■□□□ 1.42
HMGB3-205ENST00000455596 KIAA1671Q9BY89 1806 aa23.9■■□□□ 1.42
HMGB3-205ENST00000455596 JAK2O60674 1132 aa23.9■■□□□ 1.42
HMGB3-205ENST00000455596 LPXNO60711 386 aa23.9■■□□□ 1.42
HMGB3-205ENST00000455596 TRIM29Q14134 588 aa23.9■■□□□ 1.42
HMGB3-205ENST00000455596 ODR4Q5SWX8 454 aa23.9■■□□□ 1.42
HMGB3-205ENST00000455596 GDPD5Q8WTR4 605 aa23.9■■□□□ 1.42
HMGB3-205ENST00000455596 FAM20AQ96MK3 541 aa23.9■■□□□ 1.42
HMGB3-205ENST00000455596 SAMD11Q96NU1 681 aa23.9■■□□□ 1.42
HMGB3-205ENST00000455596 SUGCTQ9HAC7 445 aa23.9■■□□□ 1.42
HMGB3-205ENST00000455596 KCNMB3Q9NPA1 279 aa23.9■■□□□ 1.42
HMGB3-205ENST00000455596 MMP1P03956 469 aa23.89■■□□□ 1.41
HMGB3-205ENST00000455596 TMOD1P28289 359 aa23.89■■□□□ 1.41
HMGB3-205ENST00000455596 ST3GAL1Q11201 340 aa23.89■■□□□ 1.41
HMGB3-205ENST00000455596 NR5A1Q13285 461 aa23.89■■□□□ 1.41
HMGB3-205ENST00000455596 EARS2Q5JPH6 523 aaKnown RBP23.89■■□□□ 1.41
HMGB3-205ENST00000455596 EFCAB12Q6NXP0 572 aa23.89■■□□□ 1.41
HMGB3-205ENST00000455596 FBXO22Q8NEZ5 403 aa23.89■■□□□ 1.41
HMGB3-205ENST00000455596 LINC01599Q8WXQ3 324 aa23.89■■□□□ 1.41
HMGB3-205ENST00000455596 C17orf80Q9BSJ5 609 aa23.89■■□□□ 1.41
HMGB3-205ENST00000455596 TSPYL2Q9H2G4 693 aaPredicted RBP23.89■■□□□ 1.41
HMGB3-205ENST00000455596 CDHR5Q9HBB8 845 aa23.89■■□□□ 1.41
HMGB3-205ENST00000455596 THEGQ9P2T0 379 aa23.89■■□□□ 1.41
HMGB3-205ENST00000455596 TBX3O15119 743 aa23.88■■□□□ 1.41
HMGB3-205ENST00000455596 RPS6KA5O75582 802 aa23.88■■□□□ 1.41
HMGB3-205ENST00000455596 VTNP04004 478 aa23.88■■□□□ 1.41
HMGB3-205ENST00000455596 CLCN3P51790 818 aa23.88■■□□□ 1.41
HMGB3-205ENST00000455596 FOSBP53539 338 aa23.88■■□□□ 1.41
HMGB3-205ENST00000455596 CRYBB1P53674 252 aaPredicted RBP23.88■■□□□ 1.41
HMGB3-205ENST00000455596 NFX1Q12986 1120 aaKnown RBP23.88■■□□□ 1.41
HMGB3-205ENST00000455596 PPP2R5CQ13362 524 aa23.88■■□□□ 1.41
HMGB3-205ENST00000455596 KIZQ2M2Z5 673 aa23.88■■□□□ 1.41
HMGB3-205ENST00000455596 TMEM266Q2M3C6 531 aa23.88■■□□□ 1.41
HMGB3-205ENST00000455596 KRT40Q6A162 431 aa23.88■■□□□ 1.41
HMGB3-205ENST00000455596 FAM43BQ6ZT52 329 aaPredicted RBP23.88■■□□□ 1.41
HMGB3-205ENST00000455596 RTN4RL1Q86UN2 441 aaPredicted RBP23.88■■□□□ 1.41
HMGB3-205ENST00000455596 TNFRSF25Q93038 417 aa23.88■■□□□ 1.41
HMGB3-205ENST00000455596 MAP7D2Q96T17 732 aa23.88■■□□□ 1.41
HMGB3-205ENST00000455596 PPP1R16BQ96T49 567 aa23.88■■□□□ 1.41
HMGB3-205ENST00000455596 LMCD1Q9NZU5 365 aa23.88■■□□□ 1.41
HMGB3-205ENST00000455596 SEPT9Q9UHD8 586 aaPredicted RBP23.88■■□□□ 1.41
HMGB3-205ENST00000455596 ARID2Q68CP9 1835 aa23.88■■□□□ 1.41
HMGB3-205ENST00000455596 FAM205CA6NFA0 338 aa23.87■■□□□ 1.41
HMGB3-205ENST00000455596 MARCH6O60337 910 aa23.87■■□□□ 1.41
HMGB3-205ENST00000455596 XKR3Q5GH77 459 aa23.87■■□□□ 1.41
HMGB3-205ENST00000455596 CCDC83Q8IWF9 413 aa23.87■■□□□ 1.41
HMGB3-205ENST00000455596 FIBCD1Q8N539 461 aa23.87■■□□□ 1.41
HMGB3-205ENST00000455596 LINC01465Q8N7H1 131 aa23.87■■□□□ 1.41
HMGB3-205ENST00000455596 TMEM40Q8WWA1 233 aa23.87■■□□□ 1.41
HMGB3-205ENST00000455596 OSMRQ99650 979 aa23.87■■□□□ 1.41
HMGB3-205ENST00000455596 KIF2CQ99661 725 aa23.87■■□□□ 1.41
HMGB3-205ENST00000455596 NIFKQ9BYG3 293 aaKnown RBP23.87■■□□□ 1.41
HMGB3-205ENST00000455596 ERVK-5Q9HDB9 667 aa23.87■■□□□ 1.41
HMGB3-205ENST00000455596 AKT3Q9Y243 479 aa23.87■■□□□ 1.41
HMGB3-205ENST00000455596 NOC2LQ9Y3T9 749 aaKnown RBP23.87■■□□□ 1.41
HMGB3-205ENST00000455596 FNDC1Q4ZHG4 1894 aaPredicted RBP23.87■■□□□ 1.41
HMGB3-205ENST00000455596 ADGRA3Q8IWK6 1321 aa23.86■■□□□ 1.41
HMGB3-205ENST00000455596 GPR182O15218 404 aa23.86■■□□□ 1.41
HMGB3-205ENST00000455596 GPR32O75388 356 aa23.86■■□□□ 1.41
HMGB3-205ENST00000455596 PSMC5P62195 406 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms