RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 USP15Q9Y4E8 981 aaPredicted RBP21.31■■□□□ 1
MSH6-206ENST00000455383 PCDHB7Q9Y5E2 793 aa21.31■■□□□ 1
MSH6-206ENST00000455383 C9IYK1 514 aa21.3■■□□□ 1
MSH6-206ENST00000455383 SREBF1P36956 1147 aa21.3■■□□□ 1
MSH6-206ENST00000455383 NFX1Q12986 1120 aaKnown RBP21.3■■□□□ 1
MSH6-206ENST00000455383 NIPA1Q7RTP0 329 aa21.3■■□□□ 1
MSH6-206ENST00000455383 RBM23Q86U06 439 aaKnown RBP21.3■■□□□ 1
MSH6-206ENST00000455383 C1orf112Q9NSG2 853 aa21.3■■□□□ 1
MSH6-206ENST00000455383 COL1A2P08123 1366 aa21.3■■□□□ 1
MSH6-206ENST00000455383 FNDC1Q4ZHG4 1894 aaPredicted RBP21.29■■□□□ 1
MSH6-206ENST00000455383 TMEM221A6NGB7 291 aa21.29■■□□□ 1
MSH6-206ENST00000455383 ZBTB42B2RXF5 422 aa21.29■■□□□ 1
MSH6-206ENST00000455383 M0R296 226 aa21.29■■□□□ 1
MSH6-206ENST00000455383 RPS6KA5O75582 802 aa21.29■■□□□ 1
MSH6-206ENST00000455383 CLK2P49760 499 aaKnown RBP21.29■■□□□ 1
MSH6-206ENST00000455383 NAPAP54920 295 aa21.29■■□□□ 1
MSH6-206ENST00000455383 FAM189BP81408 668 aa21.29■■□□□ 1
MSH6-206ENST00000455383 ZXDAP98168 799 aa21.29■■□□□ 1
MSH6-206ENST00000455383 AP3B2Q13367 1082 aa21.29■■□□□ 1
MSH6-206ENST00000455383 APOA5Q6Q788 366 aa21.29■■□□□ 1
MSH6-206ENST00000455383 SLC24A5Q71RS6 500 aa21.29■■□□□ 1
MSH6-206ENST00000455383 SUSD6Q92537 303 aa21.29■■□□□ 1
MSH6-206ENST00000455383 ADAM2Q99965 735 aa21.29■■□□□ 1
MSH6-206ENST00000455383 ESYT1Q9BSJ8 1104 aa21.29■■□□□ 1
MSH6-206ENST00000455383 PHF7Q9BWX1 381 aaPredicted RBP21.29■■□□□ 1
MSH6-206ENST00000455383 TLE6Q9H808 572 aa21.29■■□□□ 1
MSH6-206ENST00000455383 RBM28Q9NW13 759 aaKnown RBP21.29■■□□□ 1
MSH6-206ENST00000455383 RNF216Q9NWF9 866 aaPredicted RBP21.29■■□□□ 1
MSH6-206ENST00000455383 PCDHB12Q9Y5F1 795 aa21.29■■□□□ 1
MSH6-206ENST00000455383 hCG_1984214I3L0E3 225 aa21.28■■□□□ 1
MSH6-206ENST00000455383 FSCN2O14926 492 aa21.28■■□□□ 1
MSH6-206ENST00000455383 DHX15O43143 795 aaKnown RBP21.28■■□□□ 1
MSH6-206ENST00000455383 ATF7P17544 494 aaPredicted RBP21.28■■□□□ 1
MSH6-206ENST00000455383 ADCY7P51828 1080 aa21.28■■□□□ 1
MSH6-206ENST00000455383 DUSP6Q16828 381 aa21.28■■□□□ 1
MSH6-206ENST00000455383 ZNF484Q5JVG2 852 aa21.28■■□□□ 1
MSH6-206ENST00000455383 ODR4Q5SWX8 454 aa21.28■■□□□ 1
MSH6-206ENST00000455383 FAM102BQ5T8I3 360 aa21.28■■□□□ 1
MSH6-206ENST00000455383 CCDC60Q8IWA6 550 aaPredicted RBP21.28■■□□□ 1
MSH6-206ENST00000455383 ZNF713Q8N859 430 aaPredicted RBP21.28■■□□□ 1
MSH6-206ENST00000455383 PRSS33Q8NF86 280 aa21.28■■□□□ 1
MSH6-206ENST00000455383 VN1R2Q8NFZ6 395 aa21.28■■□□□ 1
MSH6-206ENST00000455383 YTHDC1Q96MU7 727 aaKnown RBP21.28■■□□□ 1
MSH6-206ENST00000455383 CDCA3Q99618 268 aaPredicted RBP21.28■■□□□ 1
MSH6-206ENST00000455383 TLR9Q9NR96 1032 aa21.28■■□□□ 1
MSH6-206ENST00000455383 AAASQ9NRG9 546 aa21.28■■□□□ 1
MSH6-206ENST00000455383 ST3GAL5Q9UNP4 418 aa21.28■■□□□ 1
MSH6-206ENST00000455383 FSD2A1L4K1 749 aa21.27■■□□□ 1
MSH6-206ENST00000455383 TBKBP1A7MCY6 615 aa21.27■■□□□ 1
MSH6-206ENST00000455383 GPR182O15218 404 aa21.27■■□□□ 1
MSH6-206ENST00000455383 PPFIA3O75145 1194 aa21.27■■□□□ 1
MSH6-206ENST00000455383 FGF18O76093 207 aa21.27■■□□□ 1
MSH6-206ENST00000455383 ATP4AP20648 1035 aa21.27■■□□□ 1
MSH6-206ENST00000455383 ERVFC1P60507 584 aa21.27■■□□□ 1
MSH6-206ENST00000455383 KCNC3Q14003 757 aa21.27■■□□□ 1
MSH6-206ENST00000455383 PKN1Q16512 942 aa21.27■■□□□ 1
MSH6-206ENST00000455383 FAM160B1Q5W0V3 765 aa21.27■■□□□ 1
MSH6-206ENST00000455383 PDE12Q6L8Q7 609 aaKnown RBP21.27■■□□□ 1
MSH6-206ENST00000455383 TMEM184AQ6ZMB5 413 aa21.27■■□□□ 1
MSH6-206ENST00000455383 SYNE3Q6ZMZ3 975 aa21.27■■□□□ 1
MSH6-206ENST00000455383 CRYGNQ8WXF5 182 aa21.27■■□□□ 1
MSH6-206ENST00000455383 CWH43Q9H720 699 aa21.27■■□□□ 1
MSH6-206ENST00000455383 TYW1Q9NV66 732 aaKnown RBP21.27■■□□□ 1
MSH6-206ENST00000455383 TMEM260Q9NX78 707 aa21.27■■□□□ 1
MSH6-206ENST00000455383 BARHL2Q9NY43 387 aa21.27■■□□□ 1
MSH6-206ENST00000455383 GINS2Q9Y248 185 aa21.27■■□□□ 1
MSH6-206ENST00000455383 IGLV3-22A0A075B6J6 115 aa21.26■□□□□ 0.99
MSH6-206ENST00000455383 SMCO2A6NFE2 343 aa21.26■□□□□ 0.99
MSH6-206ENST00000455383 FAM86B1E9PN63 330 aa21.26■□□□□ 0.99
MSH6-206ENST00000455383 PER2O15055 1255 aa21.26■□□□□ 0.99
MSH6-206ENST00000455383 FAM86B2P0C5J1 330 aa21.26■□□□□ 0.99
MSH6-206ENST00000455383 CRYBB1P53674 252 aaPredicted RBP21.26■□□□□ 0.99
MSH6-206ENST00000455383 RBM10P98175 930 aaKnown RBP21.26■□□□□ 0.99
MSH6-206ENST00000455383 EXOSC10Q01780 885 aaKnown RBP21.26■□□□□ 0.99
MSH6-206ENST00000455383 DSC3Q14574 896 aa21.26■□□□□ 0.99
MSH6-206ENST00000455383 FAM228AQ86W67 206 aa21.26■□□□□ 0.99
MSH6-206ENST00000455383 COLGALT1Q8NBJ5 622 aa21.26■□□□□ 0.99
MSH6-206ENST00000455383 MICAL1Q8TDZ2 1067 aa21.26■□□□□ 0.99
MSH6-206ENST00000455383 PBXIP1Q96AQ6 731 aa21.26■□□□□ 0.99
MSH6-206ENST00000455383 GLT8D2Q9H1C3 349 aa21.26■□□□□ 0.99
MSH6-206ENST00000455383 ELAC1Q9H777 363 aaKnown RBP21.26■□□□□ 0.99
MSH6-206ENST00000455383 ZNF302Q9NR11 478 aa21.26■□□□□ 0.99
MSH6-206ENST00000455383 TMEM161AQ9NX61 479 aa21.26■□□□□ 0.99
MSH6-206ENST00000455383 HCSTQ9UBK5 93 aa21.26■□□□□ 0.99
MSH6-206ENST00000455383 BRPF3Q9ULD4 1205 aa21.26■□□□□ 0.99
MSH6-206ENST00000455383 V9GY48 417 aaPredicted RBP21.26■□□□□ 0.99
MSH6-206ENST00000455383 DENND3A2RUS2 1198 aa21.25■□□□□ 0.99
MSH6-206ENST00000455383 DDX39AO00148 427 aaKnown RBP21.25■□□□□ 0.99
MSH6-206ENST00000455383 BACH1O14867 736 aa21.25■□□□□ 0.99
MSH6-206ENST00000455383 GPR32O75388 356 aa21.25■□□□□ 0.99
MSH6-206ENST00000455383 C22orf31O95567 290 aa21.25■□□□□ 0.99
MSH6-206ENST00000455383 RTN1Q16799 776 aa21.25■□□□□ 0.99
MSH6-206ENST00000455383 IER5LQ5T953 404 aa21.25■□□□□ 0.99
MSH6-206ENST00000455383 PDXDC2PQ6P474 469 aa21.25■□□□□ 0.99
MSH6-206ENST00000455383 LZTS1Q9Y250 596 aa21.25■□□□□ 0.99
MSH6-206ENST00000455383 MAFBQ9Y5Q3 323 aaPredicted RBP21.25■□□□□ 0.99
MSH6-206ENST00000455383 CYP3A4P08684 503 aa21.24■□□□□ 0.99
MSH6-206ENST00000455383 PLCB3Q01970 1234 aa21.24■□□□□ 0.99
MSH6-206ENST00000455383 SPOUT1Q5T280 376 aaKnown RBP21.24■□□□□ 0.99
MSH6-206ENST00000455383 SWSAP1Q6NVH7 229 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms