RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 IDI2Q9BXS1 227 aa13.08□□□□□ -0.32
SMPD4-213ENST00000454468 EHD4Q9H223 541 aa13.08□□□□□ -0.32
SMPD4-213ENST00000454468 SALL4Q9UJQ4 1053 aa13.08□□□□□ -0.32
SMPD4-213ENST00000454468 SNX12Q9UMY4 172 aa13.08□□□□□ -0.32
SMPD4-213ENST00000454468 CASZ1Q86V15 1759 aa13.08□□□□□ -0.32
SMPD4-213ENST00000454468 SLC16A4O15374 487 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 MCM3P25205 808 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 PRELPP51888 382 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 SOX10P56693 466 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 MTMR2Q13614 643 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 BEND6Q5SZJ8 279 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-213ENST00000454468 PADI6Q6TGC4 694 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 SAAL1Q96ER3 474 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 NACC1Q96RE7 527 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 WDR18Q9BV38 432 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 DPH5Q9H2P9 285 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 NFU1Q9UMS0 254 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 TNRC6CQ9HCJ0 1690 aaKnown RBP13.07□□□□□ -0.32
SMPD4-213ENST00000454468 HIP1RO75146 1068 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 HEXIM1O94992 359 aaKnown RBP13.07□□□□□ -0.32
SMPD4-213ENST00000454468 ZRANB2O95218 330 aaKnown RBP eCLIP13.07□□□□□ -0.32
SMPD4-213ENST00000454468 SPATA31C1P0DKV0 1188 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 TCP1P17987 556 aaKnown RBP13.07□□□□□ -0.32
SMPD4-213ENST00000454468 HPDP32754 393 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-213ENST00000454468 PSMC2P35998 433 aaKnown RBP13.07□□□□□ -0.32
SMPD4-213ENST00000454468 ORC2Q13416 577 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-213ENST00000454468 RBM12Q9NTZ6 932 aaKnown RBP13.07□□□□□ -0.32
SMPD4-213ENST00000454468 RNF40O75150 1001 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 ENTPD3O75355 529 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 ASNSP08243 561 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 H2AFZP0C0S5 128 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 KRT5P13647 590 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 SREBF1P36956 1147 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 SLC12A3P55017 1021 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 TTLL12Q14166 644 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-213ENST00000454468 CIAPIN1Q6FI81 312 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 H2AFVQ71UI9 128 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 SYT2Q8N9I0 419 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-213ENST00000454468 ZNF668Q96K58 619 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-213ENST00000454468 RMDN3Q96TC7 470 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 UNC45AQ9H3U1 944 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 VCPKMTQ9H867 229 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 KCNMB3Q9NPA1 279 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 UBE2TQ9NPD8 197 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-213ENST00000454468 CTTNBP2NLQ9P2B4 639 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 DNAJC12Q9UKB3 198 aa13.07□□□□□ -0.32
SMPD4-213ENST00000454468 CCDC88AQ3V6T2 1871 aa13.06□□□□□ -0.32
SMPD4-213ENST00000454468 ONECUT3O60422 494 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-213ENST00000454468 HSF2BPO75031 334 aa13.06□□□□□ -0.32
SMPD4-213ENST00000454468 SSTR3P32745 418 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-213ENST00000454468 CXCL9Q07325 125 aa13.06□□□□□ -0.32
SMPD4-213ENST00000454468 TRAF1Q13077 416 aa13.06□□□□□ -0.32
SMPD4-213ENST00000454468 UHMK1Q8TAS1 419 aaKnown RBP13.06□□□□□ -0.32
SMPD4-213ENST00000454468 FAM151AQ8WW52 585 aa13.06□□□□□ -0.32
SMPD4-213ENST00000454468 CTNNBL1Q8WYA6 563 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-213ENST00000454468 ZKSCAN4Q969J2 545 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-213ENST00000454468 CEP63Q96MT8 703 aa13.06□□□□□ -0.32
SMPD4-213ENST00000454468 SELENOOQ9BVL4 669 aa13.06□□□□□ -0.32
SMPD4-213ENST00000454468 LARSQ9P2J5 1176 aaKnown RBP13.06□□□□□ -0.32
SMPD4-213ENST00000454468 HERC5Q9UII4 1024 aaKnown RBP13.06□□□□□ -0.32
SMPD4-213ENST00000454468 EYA4O95677 639 aa13.06□□□□□ -0.32
SMPD4-213ENST00000454468 MYBL2P10244 700 aa13.06□□□□□ -0.32
SMPD4-213ENST00000454468 HMGB2P26583 209 aaKnown RBP13.06□□□□□ -0.32
SMPD4-213ENST00000454468 ZNF211Q13398 564 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-213ENST00000454468 STYK1Q6J9G0 422 aa13.06□□□□□ -0.32
SMPD4-213ENST00000454468 TCHPQ9BT92 498 aa13.06□□□□□ -0.32
SMPD4-213ENST00000454468 FAM184BQ9ULE4 1060 aa13.06□□□□□ -0.32
SMPD4-213ENST00000454468 SLITRK3O94933 977 aa13.06□□□□□ -0.32
SMPD4-213ENST00000454468 GGCXP38435 758 aa13.06□□□□□ -0.32
SMPD4-213ENST00000454468 CLK2P49760 499 aaKnown RBP13.06□□□□□ -0.32
SMPD4-213ENST00000454468 MTMR1Q13613 665 aa13.06□□□□□ -0.32
SMPD4-213ENST00000454468 MEA1Q16626 185 aa13.06□□□□□ -0.32
SMPD4-213ENST00000454468 LMBRD2Q68DH5 695 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-213ENST00000454468 TRIM59Q8IWR1 403 aa13.06□□□□□ -0.32
SMPD4-213ENST00000454468 PICK1Q9NRD5 415 aa13.06□□□□□ -0.32
SMPD4-213ENST00000454468 TYW1Q9NV66 732 aaKnown RBP13.06□□□□□ -0.32
SMPD4-213ENST00000454468 DOCK2Q92608 1830 aa13.05□□□□□ -0.32
SMPD4-213ENST00000454468 DRAP1Q14919 205 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-213ENST00000454468 TEX2Q8IWB9 1127 aa13.05□□□□□ -0.32
SMPD4-213ENST00000454468 IL31RAQ8NI17 732 aa13.05□□□□□ -0.32
SMPD4-213ENST00000454468 ETNPPLQ8TBG4 499 aa13.05□□□□□ -0.32
SMPD4-213ENST00000454468 CCDC113Q9H0I3 377 aa13.05□□□□□ -0.32
SMPD4-213ENST00000454468 KCNH7Q9NS40 1196 aa13.05□□□□□ -0.32
SMPD4-213ENST00000454468 A0A1B0GUL6 1792 aa13.05□□□□□ -0.32
SMPD4-213ENST00000454468 ZBED4O75132 1171 aa13.05□□□□□ -0.32
SMPD4-213ENST00000454468 EGFRP00533 1210 aa13.05□□□□□ -0.32
SMPD4-213ENST00000454468 POLD1P28340 1107 aa13.05□□□□□ -0.32
SMPD4-213ENST00000454468 COPB2P35606 906 aa13.05□□□□□ -0.32
SMPD4-213ENST00000454468 HNRNPH2P55795 449 aaKnown RBP13.05□□□□□ -0.32
SMPD4-213ENST00000454468 MYL7Q01449 175 aa13.05□□□□□ -0.32
SMPD4-213ENST00000454468 MAP2K1Q02750 393 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-213ENST00000454468 RTKN2Q8IZC4 609 aa13.05□□□□□ -0.32
SMPD4-213ENST00000454468 TAAR1Q96RJ0 339 aa13.05□□□□□ -0.32
SMPD4-213ENST00000454468 TTYH3Q9C0H2 523 aa13.05□□□□□ -0.32
SMPD4-213ENST00000454468 ASTN2O75129 1339 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-213ENST00000454468 TLDC2A0PJX2 215 aa13.05□□□□□ -0.32
SMPD4-213ENST00000454468 GOLGA6CA6NDK9 693 aa13.05□□□□□ -0.32
SMPD4-213ENST00000454468 KRIT1O00522 736 aa13.05□□□□□ -0.32
SMPD4-213ENST00000454468 PLSCR1O15162 318 aa13.05□□□□□ -0.32
SMPD4-213ENST00000454468 TLR2O60603 784 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms