RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 ZBTB10Q96DT7 871 aa12.4□□□□□ -0.42
USP1-204ENST00000452143 UPF3BQ9BZI7 483 aaKnown RBP12.4□□□□□ -0.42
USP1-204ENST00000452143 WDFY4Q6ZS81 3184 aa12.4□□□□□ -0.42
USP1-204ENST00000452143 FSD2A1L4K1 749 aa12.39□□□□□ -0.43
USP1-204ENST00000452143 SMCO2A6NFE2 343 aa12.39□□□□□ -0.43
USP1-204ENST00000452143 GOLGA8AA7E2F4 631 aa12.39□□□□□ -0.43
USP1-204ENST00000452143 GOLGA8BA8MQT2 603 aa12.39□□□□□ -0.43
USP1-204ENST00000452143 BACH1O14867 736 aa12.39□□□□□ -0.43
USP1-204ENST00000452143 MBTPS2O43462 519 aa12.39□□□□□ -0.43
USP1-204ENST00000452143 HMGB1P09429 215 aaKnown RBP12.39□□□□□ -0.43
USP1-204ENST00000452143 SARSP49591 514 aaKnown RBP12.39□□□□□ -0.43
USP1-204ENST00000452143 SETQ01105 290 aaPredicted RBP12.39□□□□□ -0.43
USP1-204ENST00000452143 CAMK1Q14012 370 aa12.39□□□□□ -0.43
USP1-204ENST00000452143 MCTP2Q6DN12 878 aa12.39□□□□□ -0.43
USP1-204ENST00000452143 ABHD15Q6UXT9 468 aa12.39□□□□□ -0.43
USP1-204ENST00000452143 RTN4RL1Q86UN2 441 aaPredicted RBP12.39□□□□□ -0.43
USP1-204ENST00000452143 CCDC60Q8IWA6 550 aaPredicted RBP12.39□□□□□ -0.43
USP1-204ENST00000452143 TRAPPC12Q8WVT3 735 aa12.39□□□□□ -0.43
USP1-204ENST00000452143 PGBD1Q96JS3 809 aa12.39□□□□□ -0.43
USP1-204ENST00000452143 ALG13Q9NP73 1137 aaKnown RBP12.39□□□□□ -0.43
USP1-204ENST00000452143 C1orf112Q9NSG2 853 aa12.39□□□□□ -0.43
USP1-204ENST00000452143 BRPF3Q9ULD4 1205 aa12.39□□□□□ -0.43
USP1-204ENST00000452143 V9GY48 417 aaPredicted RBP12.39□□□□□ -0.43
USP1-204ENST00000452143 KLF18A0A0U1RQI7 1052 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 CCDC196A0A1B0GTZ2 297 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 ESYT2A0FGR8 921 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 FAM86B1E9PN63 330 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 CCNE2O96020 404 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 ITGB1P05556 798 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 CYP3A4P08684 503 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 FAM86B2P0C5J1 330 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 KLRC1P26715 233 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 IRS1P35568 1242 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 ZNF76P36508 570 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 NDUFV1P49821 464 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 UBE3AQ05086 875 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 DLX2Q07687 328 aaPredicted RBP12.38□□□□□ -0.43
USP1-204ENST00000452143 ADAM15Q13444 863 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 PFKFB3Q16875 520 aaPredicted RBP12.38□□□□□ -0.43
USP1-204ENST00000452143 ZNF484Q5JVG2 852 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 MIS18BP1Q6P0N0 1132 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 EFHBQ8N7U6 833 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 SPPL3Q8TCT6 385 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 CCDC12Q8WUD4 166 aaPredicted RBP12.38□□□□□ -0.43
USP1-204ENST00000452143 CRYGNQ8WXF5 182 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 KCNH6Q9H252 994 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 TMX1Q9H3N1 280 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 ERVK-5Q9HDB9 667 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 ZNF302Q9NR11 478 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 CD207Q9UJ71 328 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 LRFN2Q9ULH4 789 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 NID2Q14112 1375 aa12.38□□□□□ -0.43
USP1-204ENST00000452143 IGLV3-22A0A075B6J6 115 aa12.37□□□□□ -0.43
USP1-204ENST00000452143 DENND3A2RUS2 1198 aa12.37□□□□□ -0.43
USP1-204ENST00000452143 IPO5O00410 1097 aaKnown RBP12.37□□□□□ -0.43
USP1-204ENST00000452143 GPR182O15218 404 aa12.37□□□□□ -0.43
USP1-204ENST00000452143 RPS6KA5O75582 802 aa12.37□□□□□ -0.43
USP1-204ENST00000452143 EYA4O95677 639 aa12.37□□□□□ -0.43
USP1-204ENST00000452143 DNAJB1P25685 340 aa12.37□□□□□ -0.43
USP1-204ENST00000452143 CLUL1Q15846 466 aa12.37□□□□□ -0.43
USP1-204ENST00000452143 PAN2Q504Q3 1202 aaKnown RBP12.37□□□□□ -0.43
USP1-204ENST00000452143 ZNF746Q6NUN9 644 aaPredicted RBP12.37□□□□□ -0.43
USP1-204ENST00000452143 PDXDC2PQ6P474 469 aa12.37□□□□□ -0.43
USP1-204ENST00000452143 PLA2G4DQ86XP0 818 aa12.37□□□□□ -0.43
USP1-204ENST00000452143 SMAP1Q8IYB5 467 aaPredicted RBP12.37□□□□□ -0.43
USP1-204ENST00000452143 KLHL23Q8NBE8 558 aa12.37□□□□□ -0.43
USP1-204ENST00000452143 SMRP1Q8NCR6 262 aa12.37□□□□□ -0.43
USP1-204ENST00000452143 POF1BQ8WVV4 589 aa12.37□□□□□ -0.43
USP1-204ENST00000452143 BBXQ8WY36 941 aaPredicted RBP12.37□□□□□ -0.43
USP1-204ENST00000452143 MSLNLQ96KJ4 702 aa12.37□□□□□ -0.43
USP1-204ENST00000452143 TCEANC2Q96MN5 208 aa12.37□□□□□ -0.43
USP1-204ENST00000452143 ZMYND12Q9H0C1 365 aa12.37□□□□□ -0.43
USP1-204ENST00000452143 AAASQ9NRG9 546 aa12.37□□□□□ -0.43
USP1-204ENST00000452143 RGS18Q9NS28 235 aa12.37□□□□□ -0.43
USP1-204ENST00000452143 FAM217BQ9NTX9 383 aaPredicted RBP12.37□□□□□ -0.43
USP1-204ENST00000452143 TBC1D22BQ9NU19 505 aa12.37□□□□□ -0.43
USP1-204ENST00000452143 TMEM260Q9NX78 707 aa12.37□□□□□ -0.43
USP1-204ENST00000452143 TCEAL9Q9UHQ7 104 aa12.37□□□□□ -0.43
USP1-204ENST00000452143 ZBTB42B2RXF5 422 aa12.36□□□□□ -0.43
USP1-204ENST00000452143 DDX39AO00148 427 aaKnown RBP12.36□□□□□ -0.43
USP1-204ENST00000452143 LINC01565O15544 149 aa12.36□□□□□ -0.43
USP1-204ENST00000452143 DHX15O43143 795 aaKnown RBP12.36□□□□□ -0.43
USP1-204ENST00000452143 ATMINO43313 823 aaPredicted RBP12.36□□□□□ -0.43
USP1-204ENST00000452143 CSPG5O95196 566 aa12.36□□□□□ -0.43
USP1-204ENST00000452143 CDC27P30260 824 aa12.36□□□□□ -0.43
USP1-204ENST00000452143 GTF2F1P35269 517 aaKnown RBP eCLIP12.36□□□□□ -0.43
USP1-204ENST00000452143 METAP2P50579 478 aaKnown RBP eCLIP12.36□□□□□ -0.43
USP1-204ENST00000452143 NFX1Q12986 1120 aaKnown RBP12.36□□□□□ -0.43
USP1-204ENST00000452143 COASYQ13057 564 aa12.36□□□□□ -0.43
USP1-204ENST00000452143 TMEM266Q2M3C6 531 aa12.36□□□□□ -0.43
USP1-204ENST00000452143 ADCK5Q3MIX3 580 aa12.36□□□□□ -0.43
USP1-204ENST00000452143 HERC4Q5GLZ8 1057 aaPredicted RBP12.36□□□□□ -0.43
USP1-204ENST00000452143 SLC24A5Q71RS6 500 aa12.36□□□□□ -0.43
USP1-204ENST00000452143 RASEFQ8IZ41 740 aa12.36□□□□□ -0.43
USP1-204ENST00000452143 KIAA0319LQ8IZA0 1049 aa12.36□□□□□ -0.43
USP1-204ENST00000452143 REXO1Q8N1G1 1221 aaKnown RBP12.36□□□□□ -0.43
USP1-204ENST00000452143 TMEM40Q8WWA1 233 aa12.36□□□□□ -0.43
USP1-204ENST00000452143 UIMC1Q96RL1 719 aa12.36□□□□□ -0.43
USP1-204ENST00000452143 ZNF577Q9BSK1 485 aa12.36□□□□□ -0.43
USP1-204ENST00000452143 IGFLR1Q9H665 355 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 172.2 ms