RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 MTERF2Q49AM1 385 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 C9orf50Q5SZB4 431 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 ARL6IP4Q66PJ3 421 aaKnown RBP9.94□□□□□ -0.82
COL8A1-203ENST00000452013 EFCAB12Q6NXP0 572 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 CNKSR3Q6P9H4 555 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 RUFY4Q6ZNE9 571 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 FERMT3Q86UX7 667 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 KIAA0319LQ8IZA0 1049 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 USP38Q8NB14 1042 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 HERVK_113Q902F9 699 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 SEPT8Q92599 483 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 WNT8BQ93098 351 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 CEP170P1Q96L14 293 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 RNPC3Q96LT9 517 aaKnown RBP9.94□□□□□ -0.82
COL8A1-203ENST00000452013 NACC1Q96RE7 527 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 LXNQ9BS40 222 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 SUGCTQ9HAC7 445 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 TUFT1Q9NNX1 390 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 ANKEF1Q9NU02 776 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 PCDH10Q9P2E7 1040 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 MTMR6Q9Y217 621 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 SQORQ9Y6N5 450 aa9.94□□□□□ -0.82
COL8A1-203ENST00000452013 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.93□□□□□ -0.82
COL8A1-203ENST00000452013 ABHD14A-ACY1A0A1B0GW23 586 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.93□□□□□ -0.82
COL8A1-203ENST00000452013 ZBTB42B2RXF5 422 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 NBNO60934 754 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 MAFO75444 373 aaPredicted RBP9.93□□□□□ -0.82
COL8A1-203ENST00000452013 BAIAP3O94812 1187 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 STBD1O95210 358 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 C22orf31O95567 290 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 CHRNA1P02708 482 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 CTSHP09668 335 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 MUTP22033 750 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 YWHABP31946 246 aaKnown RBP9.93□□□□□ -0.82
COL8A1-203ENST00000452013 MRPS6P82932 125 aaKnown RBP9.93□□□□□ -0.82
COL8A1-203ENST00000452013 ATP2C1P98194 919 aaPredicted RBP9.93□□□□□ -0.82
COL8A1-203ENST00000452013 CYP4A11Q02928 519 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 IKBKEQ14164 716 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 XKR9Q5GH70 373 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 ODR4Q5SWX8 454 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 KRT79Q5XKE5 535 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 HAUS3Q68CZ6 603 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 TRAF7Q6Q0C0 670 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 ANO5Q75V66 913 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 OTOP2Q7RTS6 562 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 SPRYD3Q8NCJ5 442 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 SLC7A3Q8WY07 619 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 APBB2Q92870 758 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 CCDC43Q96MW1 224 aaKnown RBP9.93□□□□□ -0.82
COL8A1-203ENST00000452013 MAP7D2Q96T17 732 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 POLR3CQ9BUI4 534 aaPredicted RBP9.93□□□□□ -0.82
COL8A1-203ENST00000452013 CELF4Q9BZC1 486 aaKnown RBP9.93□□□□□ -0.82
COL8A1-203ENST00000452013 CYP26B1Q9NR63 512 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 TRPV2Q9Y5S1 764 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 CDY2AQ9Y6F7 541 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 SLC4A7Q9Y6M7 1214 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 MCM3APO60318 1980 aa9.93□□□□□ -0.82
COL8A1-203ENST00000452013 FRMPD3Q5JV73 1810 aa9.92□□□□□ -0.82
COL8A1-203ENST00000452013 POTEMA6NI47 508 aa9.92□□□□□ -0.82
COL8A1-203ENST00000452013 ZBBXA8MT70 800 aa9.92□□□□□ -0.82
COL8A1-203ENST00000452013 RPA1P27694 616 aa9.92□□□□□ -0.82
COL8A1-203ENST00000452013 CCT6AP40227 531 aaKnown RBP9.92□□□□□ -0.82
COL8A1-203ENST00000452013 RFC5P40937 340 aa9.92□□□□□ -0.82
COL8A1-203ENST00000452013 CRYBB1P53674 252 aaPredicted RBP9.92□□□□□ -0.82
COL8A1-203ENST00000452013 MGAT3Q09327 533 aa9.92□□□□□ -0.82
COL8A1-203ENST00000452013 RESTQ13127 1097 aa9.92□□□□□ -0.82
COL8A1-203ENST00000452013 GPNMBQ14956 572 aa9.92□□□□□ -0.82
COL8A1-203ENST00000452013 SF3A1Q15459 793 aaKnown RBP9.92□□□□□ -0.82
COL8A1-203ENST00000452013 PLEKHG4Q58EX7 1191 aa9.92□□□□□ -0.82
COL8A1-203ENST00000452013 RASIP1Q5U651 963 aa9.92□□□□□ -0.82
COL8A1-203ENST00000452013 CATSPER3Q86XQ3 398 aa9.92□□□□□ -0.82
COL8A1-203ENST00000452013 KCTD17Q8N5Z5 321 aa9.92□□□□□ -0.82
COL8A1-203ENST00000452013 IGSF22Q8N9C0 903 aa9.92□□□□□ -0.82
COL8A1-203ENST00000452013 DBF4BQ8NFT6 615 aa9.92□□□□□ -0.82
COL8A1-203ENST00000452013 PHOSPHO2Q8TCD6 241 aa9.92□□□□□ -0.82
COL8A1-203ENST00000452013 ZBTB10Q96DT7 871 aa9.92□□□□□ -0.82
COL8A1-203ENST00000452013 ZNF396Q96N95 335 aaPredicted RBP9.92□□□□□ -0.82
COL8A1-203ENST00000452013 AKT3Q9Y243 479 aa9.92□□□□□ -0.82
COL8A1-203ENST00000452013 KDM3AQ9Y4C1 1321 aa9.91□□□□□ -0.82
COL8A1-203ENST00000452013 IGKV6-21A0A0C4DH24 114 aa9.91□□□□□ -0.82
COL8A1-203ENST00000452013 ASAP2O43150 1006 aa9.91□□□□□ -0.82
COL8A1-203ENST00000452013 GAS2O43903 313 aaKnown RBP9.91□□□□□ -0.82
COL8A1-203ENST00000452013 SPATA31C1P0DKV0 1188 aa9.91□□□□□ -0.82
COL8A1-203ENST00000452013 ZSCAN22P10073 491 aaPredicted RBP9.91□□□□□ -0.82
COL8A1-203ENST00000452013 KCNJ6P48051 423 aa9.91□□□□□ -0.82
COL8A1-203ENST00000452013 POLGP54098 1239 aaPredicted RBP9.91□□□□□ -0.82
COL8A1-203ENST00000452013 NPEPPSP55786 919 aa9.91□□□□□ -0.82
COL8A1-203ENST00000452013 NLRP11P59045 1033 aaKnown RBP9.91□□□□□ -0.82
COL8A1-203ENST00000452013 SMAD3P84022 425 aaKnown RBP9.91□□□□□ -0.82
COL8A1-203ENST00000452013 TMEM62Q0P6H9 643 aa9.91□□□□□ -0.82
COL8A1-203ENST00000452013 MBTPS1Q14703 1052 aa9.91□□□□□ -0.82
COL8A1-203ENST00000452013 FBXO47Q5MNV8 452 aa9.91□□□□□ -0.82
COL8A1-203ENST00000452013 LRRC71Q8N4P6 559 aa9.91□□□□□ -0.82
COL8A1-203ENST00000452013 TCP11Q8WWU5 503 aa9.91□□□□□ -0.82
COL8A1-203ENST00000452013 VWCEQ96DN2 955 aa9.91□□□□□ -0.82
COL8A1-203ENST00000452013 AK8Q96MA6 479 aa9.91□□□□□ -0.82
COL8A1-203ENST00000452013 CEP89Q96ST8 783 aa9.91□□□□□ -0.82
COL8A1-203ENST00000452013 SUCLA2Q9P2R7 463 aaPredicted RBP9.91□□□□□ -0.82
COL8A1-203ENST00000452013 WRAP73Q9P2S5 460 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms