RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 ODR4Q5SWX8 454 aa10.71□□□□□ -0.69
RFC4-210ENST00000449502 IQSEC1Q6DN90 963 aa10.71□□□□□ -0.69
RFC4-210ENST00000449502 CCDC62Q6P9F0 684 aa10.71□□□□□ -0.69
RFC4-210ENST00000449502 CCDC60Q8IWA6 550 aaPredicted RBP10.71□□□□□ -0.69
RFC4-210ENST00000449502 NELFCDQ8IXH7 590 aa10.71□□□□□ -0.69
RFC4-210ENST00000449502 EXOC8Q8IYI6 725 aa10.71□□□□□ -0.69
RFC4-210ENST00000449502 MCPH1Q8NEM0 835 aa10.71□□□□□ -0.69
RFC4-210ENST00000449502 KIFAP3Q92845 792 aa10.71□□□□□ -0.69
RFC4-210ENST00000449502 IFT74Q96LB3 600 aa10.71□□□□□ -0.69
RFC4-210ENST00000449502 GPR20Q99678 358 aa10.71□□□□□ -0.69
RFC4-210ENST00000449502 APBA2Q99767 749 aa10.71□□□□□ -0.69
RFC4-210ENST00000449502 SMARCAD1Q9H4L7 1026 aa10.71□□□□□ -0.69
RFC4-210ENST00000449502 THAP9Q9H5L6 903 aa10.71□□□□□ -0.69
RFC4-210ENST00000449502 ATP6V0A4Q9HBG4 840 aa10.71□□□□□ -0.69
RFC4-210ENST00000449502 PDGFCQ9NRA1 345 aa10.71□□□□□ -0.69
RFC4-210ENST00000449502 KCNG1Q9UIX4 513 aa10.71□□□□□ -0.69
RFC4-210ENST00000449502 PPME1Q9Y570 386 aa10.71□□□□□ -0.69
RFC4-210ENST00000449502 PCDHB13Q9Y5F0 798 aa10.71□□□□□ -0.69
RFC4-210ENST00000449502 MAFBQ9Y5Q3 323 aaPredicted RBP10.71□□□□□ -0.69
RFC4-210ENST00000449502 RLFQ13129 1914 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 IGSF9BQ9UPX0 1349 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 GSTTP1A0A1W2PQM5 241 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 SFI1A8K8P3 1242 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 PES1O00541 588 aaKnown RBP10.7□□□□□ -0.7
RFC4-210ENST00000449502 SNAI1O95863 264 aaPredicted RBP10.7□□□□□ -0.7
RFC4-210ENST00000449502 PLS3P13797 630 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 HOXD10P28358 340 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 RFC5P40937 340 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 ADCYAP1R1P41586 468 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 PSMC4P43686 418 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 SLC26A2P50443 739 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 SMTNP53814 917 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 NPEPPSP55786 919 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 EHHADHQ08426 723 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 DMP1Q13316 513 aaPredicted RBP10.7□□□□□ -0.7
RFC4-210ENST00000449502 ALCAMQ13740 583 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 BRDTQ58F21 947 aaPredicted RBP10.7□□□□□ -0.7
RFC4-210ENST00000449502 HSP90AA4PQ58FG1 418 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 MFSD14CQ5VZR4 134 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 OLFML2BQ68BL8 750 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 TAPT1Q6NXT6 567 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 PPP4R3CPQ6ZMV5 832 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 SYCP3Q8IZU3 236 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 SPC24Q8NBT2 197 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 OR6J1Q8NGC5 347 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 AFAP1L1Q8TED9 768 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 SLC7A3Q8WY07 619 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 MRFAP1L1Q96HT8 127 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 ZIC5Q96T25 663 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 JPH2Q9BR39 696 aaPredicted RBP10.7□□□□□ -0.7
RFC4-210ENST00000449502 SRRTQ9BXP5 876 aaKnown RBP10.7□□□□□ -0.7
RFC4-210ENST00000449502 BCAS3Q9H6U6 928 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 CYP26B1Q9NR63 512 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 OLFML3Q9NRN5 406 aa10.7□□□□□ -0.7
RFC4-210ENST00000449502 SAMSN1Q9NSI8 373 aaKnown RBP10.7□□□□□ -0.7
RFC4-210ENST00000449502 UBE4BO95155 1302 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 RBM47A0AV96 593 aaKnown RBP10.69□□□□□ -0.7
RFC4-210ENST00000449502 TRIM49BA6NDI0 452 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 CCDC169A6NNP5 214 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 RSPH10B2B2RC85 870 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 KCNJ18B7U540 433 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 H0YCG3 227 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 K7ENM7 598 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 EIF3DO15371 548 aaKnown RBP eCLIP10.69□□□□□ -0.7
RFC4-210ENST00000449502 ZNF862O60290 1169 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 HOXC6P09630 235 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 RSPH10BP0C881 870 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 MAPTP10636 758 aaKnown RBP10.69□□□□□ -0.7
RFC4-210ENST00000449502 ATP1A3P13637 1013 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 ZNF18P17022 549 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 RPL13P26373 211 aaKnown RBP10.69□□□□□ -0.7
RFC4-210ENST00000449502 MARK3P27448 753 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 CDC25BP30305 580 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 MAP2K2P36507 400 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 MTIF2P46199 727 aaKnown RBP10.69□□□□□ -0.7
RFC4-210ENST00000449502 ZNF131P52739 623 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 FKBP3Q00688 224 aaKnown RBP10.69□□□□□ -0.7
RFC4-210ENST00000449502 SP3Q02447 781 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 TNFAIP2Q03169 654 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 IRF5Q13568 498 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 KCNJ12Q14500 433 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 ARHGEF6Q15052 776 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 KNOP1Q1ED39 458 aaKnown RBP10.69□□□□□ -0.7
RFC4-210ENST00000449502 ANKRD40Q6AI12 368 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 CENPPQ6IPU0 288 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 TTI2Q6NXR4 508 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 ANO5Q75V66 913 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 HS2ST1Q7LGA3 356 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 PLPPR4Q7Z2D5 763 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 PPTC7Q8NI37 304 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 GOLGA5Q8TBA6 731 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 SCFD1Q8WVM8 642 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 BBXQ8WY36 941 aaPredicted RBP10.69□□□□□ -0.7
RFC4-210ENST00000449502 COPS5Q92905 334 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 PDLIM2Q96JY6 352 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 SH2D3AQ9BRG2 576 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 XPO4Q9C0E2 1151 aaKnown RBP10.69□□□□□ -0.7
RFC4-210ENST00000449502 AP5M1Q9H0R1 490 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 POLD4Q9HCU8 107 aa10.69□□□□□ -0.7
RFC4-210ENST00000449502 ZNF215Q9UL58 517 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms