RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 USP38Q8NB14 1042 aa18.37■□□□□ 0.53
SF3A1-204ENST00000447376 BANK1Q8NDB2 785 aa18.37■□□□□ 0.53
SF3A1-204ENST00000447376 JPH2Q9BR39 696 aaPredicted RBP18.37■□□□□ 0.53
SF3A1-204ENST00000447376 ZBED2Q9BTP6 218 aa18.37■□□□□ 0.53
SF3A1-204ENST00000447376 IFIH1Q9BYX4 1025 aaKnown RBP18.37■□□□□ 0.53
SF3A1-204ENST00000447376 VAV3Q9UKW4 847 aa18.37■□□□□ 0.53
SF3A1-204ENST00000447376 TRPV2Q9Y5S1 764 aa18.37■□□□□ 0.53
SF3A1-204ENST00000447376 CDY2AQ9Y6F7 541 aa18.37■□□□□ 0.53
SF3A1-204ENST00000447376 AMHP03971 560 aa18.36■□□□□ 0.53
SF3A1-204ENST00000447376 DNAJB2P25686 324 aa18.36■□□□□ 0.53
SF3A1-204ENST00000447376 DNM2P50570 870 aa18.36■□□□□ 0.53
SF3A1-204ENST00000447376 UGCGQ16739 394 aa18.36■□□□□ 0.53
SF3A1-204ENST00000447376 OTUD6AQ7L8S5 288 aa18.36■□□□□ 0.53
SF3A1-204ENST00000447376 DBF4BQ8NFT6 615 aa18.36■□□□□ 0.53
SF3A1-204ENST00000447376 NEK9Q8TD19 979 aa18.36■□□□□ 0.53
SF3A1-204ENST00000447376 TIFAQ96CG3 184 aa18.36■□□□□ 0.53
SF3A1-204ENST00000447376 FOXD4L1Q9NU39 408 aa18.36■□□□□ 0.53
SF3A1-204ENST00000447376 ZNF862O60290 1169 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 C22orf31O95567 290 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 OR52Z1P0C646 297 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 GHRP10912 638 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 WDR5P61964 334 aaKnown RBP18.35■□□□□ 0.53
SF3A1-204ENST00000447376 TMEM62Q0P6H9 643 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 MBTPS1Q14703 1052 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 ZNF174Q15697 407 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 MTERF2Q49AM1 385 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 PLEKHG4Q58EX7 1191 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 RILPL1Q5EBL4 403 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 EFCAB12Q6NXP0 572 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 TSHZ1Q6ZSZ6 1077 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 ERMNQ8TAM6 284 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 ZBTB10Q96DT7 871 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 SCLT1Q96NL6 688 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 LXNQ9BS40 222 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 CELF4Q9BZC1 486 aaKnown RBP18.35■□□□□ 0.53
SF3A1-204ENST00000447376 RAB34Q9BZG1 259 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 ZSWIM4Q9H7M6 989 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 SLC28A3Q9HAS3 691 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 AKT3Q9Y243 479 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 GINS2Q9Y248 185 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 PPME1Q9Y570 386 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 SQORQ9Y6N5 450 aa18.35■□□□□ 0.53
SF3A1-204ENST00000447376 VPS37CA5D8V6 355 aaPredicted RBP18.34■□□□□ 0.53
SF3A1-204ENST00000447376 EML1O00423 815 aa18.34■□□□□ 0.53
SF3A1-204ENST00000447376 CHRNA1P02708 482 aa18.34■□□□□ 0.53
SF3A1-204ENST00000447376 CDC42EP1Q00587 391 aa18.34■□□□□ 0.53
SF3A1-204ENST00000447376 GPNMBQ14956 572 aa18.34■□□□□ 0.53
SF3A1-204ENST00000447376 FAM43BQ6ZT52 329 aaPredicted RBP18.34■□□□□ 0.53
SF3A1-204ENST00000447376 VWCEQ96DN2 955 aa18.34■□□□□ 0.53
SF3A1-204ENST00000447376 NIFKQ9BYG3 293 aaKnown RBP18.34■□□□□ 0.53
SF3A1-204ENST00000447376 PBX4Q9BYU1 374 aa18.34■□□□□ 0.53
SF3A1-204ENST00000447376 SUGCTQ9HAC7 445 aa18.34■□□□□ 0.53
SF3A1-204ENST00000447376 PCDHA11Q9Y5I1 949 aa18.34■□□□□ 0.53
SF3A1-204ENST00000447376 KDM3AQ9Y4C1 1321 aa18.33■□□□□ 0.53
SF3A1-204ENST00000447376 GRXCR1A8MXD5 290 aa18.33■□□□□ 0.52
SF3A1-204ENST00000447376 ZBTB42B2RXF5 422 aa18.33■□□□□ 0.52
SF3A1-204ENST00000447376 LAD1O00515 517 aa18.33■□□□□ 0.52
SF3A1-204ENST00000447376 CYP4A11Q02928 519 aa18.33■□□□□ 0.52
SF3A1-204ENST00000447376 MGAT3Q09327 533 aa18.33■□□□□ 0.52
SF3A1-204ENST00000447376 PAK2Q13177 524 aa18.33■□□□□ 0.52
SF3A1-204ENST00000447376 FBXO47Q5MNV8 452 aa18.33■□□□□ 0.52
SF3A1-204ENST00000447376 HERC6Q8IVU3 1022 aa18.33■□□□□ 0.52
SF3A1-204ENST00000447376 TPH2Q8IWU9 490 aa18.33■□□□□ 0.52
SF3A1-204ENST00000447376 C4orf19Q8IY42 314 aa18.33■□□□□ 0.52
SF3A1-204ENST00000447376 SLC7A3Q8WY07 619 aa18.33■□□□□ 0.52
SF3A1-204ENST00000447376 DYDC2Q96IM9 177 aa18.33■□□□□ 0.52
SF3A1-204ENST00000447376 MTMR9Q96QG7 549 aa18.33■□□□□ 0.52
SF3A1-204ENST00000447376 STK24Q9Y6E0 443 aa18.33■□□□□ 0.52
SF3A1-204ENST00000447376 TLL1O43897 1013 aa18.32■□□□□ 0.52
SF3A1-204ENST00000447376 SYT1P21579 422 aa18.32■□□□□ 0.52
SF3A1-204ENST00000447376 CLCN3P51790 818 aa18.32■□□□□ 0.52
SF3A1-204ENST00000447376 SPIRE1Q08AE8 756 aa18.32■□□□□ 0.52
SF3A1-204ENST00000447376 HAUS3Q68CZ6 603 aa18.32■□□□□ 0.52
SF3A1-204ENST00000447376 Q7L0L9 218 aa18.32■□□□□ 0.52
SF3A1-204ENST00000447376 BRAPQ7Z569 592 aa18.32■□□□□ 0.52
SF3A1-204ENST00000447376 KIAA0319LQ8IZA0 1049 aa18.32■□□□□ 0.52
SF3A1-204ENST00000447376 MYOCDQ8IZQ8 938 aa18.32■□□□□ 0.52
SF3A1-204ENST00000447376 CEP170P1Q96L14 293 aa18.32■□□□□ 0.52
SF3A1-204ENST00000447376 EIF2AK1Q9BQI3 630 aaKnown RBP18.32■□□□□ 0.52
SF3A1-204ENST00000447376 FTHL17Q9BXU8 183 aa18.32■□□□□ 0.52
SF3A1-204ENST00000447376 WDR81Q562E7 1941 aa18.31■□□□□ 0.52
SF3A1-204ENST00000447376 WNT7AO00755 349 aa18.31■□□□□ 0.52
SF3A1-204ENST00000447376 SLC34A2O95436 690 aa18.31■□□□□ 0.52
SF3A1-204ENST00000447376 YWHABP31946 246 aaKnown RBP18.31■□□□□ 0.52
SF3A1-204ENST00000447376 RFC5P40937 340 aa18.31■□□□□ 0.52
SF3A1-204ENST00000447376 TECP42680 631 aa18.31■□□□□ 0.52
SF3A1-204ENST00000447376 POLGP54098 1239 aaPredicted RBP18.31■□□□□ 0.52
SF3A1-204ENST00000447376 CTTNQ14247 550 aaKnown RBP18.31■□□□□ 0.52
SF3A1-204ENST00000447376 LPIN1Q14693 890 aa18.31■□□□□ 0.52
SF3A1-204ENST00000447376 PPP2R2DQ66LE6 453 aa18.31■□□□□ 0.52
SF3A1-204ENST00000447376 LRRC71Q8N4P6 559 aa18.31■□□□□ 0.52
SF3A1-204ENST00000447376 FAM161BQ96MY7 647 aa18.31■□□□□ 0.52
SF3A1-204ENST00000447376 TMEM60Q9H2L4 133 aa18.31■□□□□ 0.52
SF3A1-204ENST00000447376 CYP26B1Q9NR63 512 aa18.31■□□□□ 0.52
SF3A1-204ENST00000447376 RNF216Q9NWF9 866 aaPredicted RBP18.31■□□□□ 0.52
SF3A1-204ENST00000447376 RGL1Q9NZL6 768 aa18.31■□□□□ 0.52
SF3A1-204ENST00000447376 LAMA3Q16787 3333 aa18.31■□□□□ 0.52
SF3A1-204ENST00000447376 POTEMA6NI47 508 aa18.3■□□□□ 0.52
SF3A1-204ENST00000447376 GPR182O15218 404 aa18.3■□□□□ 0.52
SF3A1-204ENST00000447376 STX6O43752 255 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms