RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 ZNF772Q68DY9 489 aaPredicted RBP8.63□□□□□ -1.03
RIF1-205ENST00000444746 TMEM143Q96AN5 459 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 CHP1Q99653 195 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 DDX47Q9H0S4 455 aaKnown RBP8.63□□□□□ -1.03
RIF1-205ENST00000444746 RPAP3Q9H6T3 665 aaPredicted RBP8.63□□□□□ -1.03
RIF1-205ENST00000444746 INTS9Q9NV88 658 aaKnown RBP8.63□□□□□ -1.03
RIF1-205ENST00000444746 FAM8A1Q9UBU6 413 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 LRFN2Q9ULH4 789 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 HEY1Q9Y5J3 304 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 CRB1P82279 1406 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 GAP43P17677 238 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 COPB2P35606 906 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 CFAP61Q8NHU2 1237 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 SLC30A5Q8TAD4 765 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 C1orf54Q8WWF1 131 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 EHD2Q9NZN4 543 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 PASKQ96RG2 1323 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 CPS1P31327 1500 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 GIPC1O14908 333 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 MOCS2O96007 188 aaPredicted RBP8.63□□□□□ -1.03
RIF1-205ENST00000444746 FDPSP14324 419 aaKnown RBP8.63□□□□□ -1.03
RIF1-205ENST00000444746 PDCLQ13371 301 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 CATSPER4Q7RTX7 472 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 SAMD7Q7Z3H4 446 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 GLYCTKQ8IVS8 523 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 ABI1Q8IZP0 508 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 GOLGA5Q8TBA6 731 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 PPP1R13LQ8WUF5 828 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 AK8Q96MA6 479 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 FBXO2Q9UK22 296 aaPredicted RBP8.63□□□□□ -1.03
RIF1-205ENST00000444746 PLAAQ9Y263 795 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.63□□□□□ -1.03
RIF1-205ENST00000444746 GMNNO75496 209 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 CTDNEP1O95476 244 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 LRRC8CQ8TDW0 803 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 GRK7Q8WTQ7 553 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 TMEM60Q9H2L4 133 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 RPF1Q9H9Y2 349 aaKnown RBP8.63□□□□□ -1.03
RIF1-205ENST00000444746 STK17AQ9UEE5 414 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 LAD1O00515 517 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 CREB3O43889 395 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 HIP1RO75146 1068 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 BIRC2Q13490 618 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 RPS6KA2Q15349 733 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 SUPT20HL1Q3ZLR7 823 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 PRR5LQ6MZQ0 368 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 TCP11Q8WWU5 503 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 GJD4Q96KN9 370 aaPredicted RBP8.63□□□□□ -1.03
RIF1-205ENST00000444746 ANAPC7Q9UJX3 599 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 ALKQ9UM73 1620 aa8.63□□□□□ -1.03
RIF1-205ENST00000444746 PPFIA2O75334 1257 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 SLURP2P0DP57 97 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 TROVE2P10155 538 aaKnown RBP eCLIP8.62□□□□□ -1.03
RIF1-205ENST00000444746 RCSD1Q6JBY9 416 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 CDC42EP5Q6NZY7 148 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 DGKHQ86XP1 1220 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 ACSF2Q96CM8 615 aaPredicted RBP8.62□□□□□ -1.03
RIF1-205ENST00000444746 EIF2AK1Q9BQI3 630 aaKnown RBP8.62□□□□□ -1.03
RIF1-205ENST00000444746 LRRC7Q96NW7 1537 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 ATMINO43313 823 aaPredicted RBP8.62□□□□□ -1.03
RIF1-205ENST00000444746 CAMTA2O94983 1202 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 GBP1P32455 592 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 ORC1Q13415 861 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 C1orf228Q6PIY5 440 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 CCDC33Q8N5R6 958 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 WDR24Q96S15 920 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 POLR3FQ9H1D9 316 aaPredicted RBP8.62□□□□□ -1.03
RIF1-205ENST00000444746 CNOT8Q9UFF9 292 aaKnown RBP8.62□□□□□ -1.03
RIF1-205ENST00000444746 MRPL42Q9Y6G3 142 aaKnown RBP8.62□□□□□ -1.03
RIF1-205ENST00000444746 PGRMC1O00264 195 aaKnown RBP8.62□□□□□ -1.03
RIF1-205ENST00000444746 CFLARO15519 480 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 INHBAP08476 426 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 DR1Q01658 176 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 PDIA6Q15084 440 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 FOXP4Q8IVH2 680 aaPredicted RBP8.62□□□□□ -1.03
RIF1-205ENST00000444746 CHMP6Q96FZ7 201 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 ATXN7L3BQ96GX2 97 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 LXNQ9BS40 222 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 KLHL14Q9P2G3 628 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 LPXNO60711 386 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 PSMA2P25787 234 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 CASP8Q14790 479 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 FAM47EQ6ZV65 393 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 MAIP1Q8WWC4 291 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 NBPF3Q9H094 633 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 MYO5CQ9NQX4 1742 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 PSMC5P62195 406 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 GABPB1Q06547 395 aaPredicted RBP8.62□□□□□ -1.03
RIF1-205ENST00000444746 LGSNQ5TDP6 509 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 RINT1Q6NUQ1 792 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 UNC13DQ70J99 1090 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 ERICH1Q86X53 443 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 PPP4R1Q8TF05 950 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 KIFC3Q9BVG8 833 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 SAYSD1Q9NPB0 183 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 POLRMTO00411 1230 aaKnown RBP8.62□□□□□ -1.03
RIF1-205ENST00000444746 SPAG7O75391 227 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 CTSHP09668 335 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 EXOSC10Q01780 885 aaKnown RBP8.62□□□□□ -1.03
RIF1-205ENST00000444746 NME3Q13232 169 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms